Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g413 Utricularia gibba HOM05D002211 ORTHO05D002206 1.5e-115 419.5 207 100.0
unitig_60.g25577 Utricularia gibba HOM05D002211 ORTHO05D002206 8.0e-32 141.4 72 86.1
Migut.N00663 Erythranthe guttata HOM05D002211 ORTHO05D002206 6.4e-29 131.7 109 60.6
Dinv28814 Davidia involucrata HOM05D002211 ORTHO05D002206 2.4e-28 129.8 104 59.6
unitig_0.g1220 Utricularia gibba HOM05D002211 ORTHO05D002206 3.2e-28 129.4 151 48.3
DCAR_012692 Daucus carota HOM05D002211 ORTHO05D002206 1.2e-27 127.5 103 62.1
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 1.2e-27 127.5 103 58.3
CSS0000478 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 1.6e-27 127.1 104 59.6
DCAR_018626 Daucus carota HOM05D002211 ORTHO05D002206 2.1e-27 126.7 110 57.3
GSVIVG01006232001 Vitis vinifera HOM05D002211 ORTHO05D002206 2.1e-27 126.7 93 65.6
Lsat_1_v5_gn_9_16221 Lactuca sativa HOM05D002211 ORTHO05D002206 7.8e-27 124.8 125 56.8
MSTRG.17972 Avicennia marina HOM05D002211 ORTHO05D002206 1.3e-26 124.0 103 58.3
Rhsim13G0052500 Rhododendron simsii HOM05D002211 ORTHO05D002206 3.0e-26 122.9 93 59.1
CSS0050270 Camellia sinensis var. sinensis HOM05D002211 ORTHO05D002206 2.5e-25 119.8 101 58.4
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 2.5e-25 119.8 93 64.5
Rhsim01G0248800 Rhododendron simsii HOM05D002211 ORTHO05D002206 2.5e-25 119.8 100 61.0
Nitab4.5_0011983g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 3.3e-25 119.4 103 56.3
Actinidia23360 Actinidia chinensis HOM05D002211 ORTHO05D002206 7.3e-25 118.2 96 60.4
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 7.3e-25 118.2 101 56.4
Cc01_g16160 Coffea canephora HOM05D002211 ORTHO05D002206 9.5e-25 117.9 103 58.3
Actinidia30019 Actinidia chinensis HOM05D002211 ORTHO05D002206 1.2e-24 117.5 94 59.6
Haze_23452 Corylus avellana HOM05D002211 ORTHO05D002206 1.2e-24 117.5 98 58.2
SalBow6G1551 Salvia bowleyana HOM05D002211 ORTHO05D002206 1.2e-24 117.5 77 68.8
Cpa.g.sc8.75 Carica papaya HOM05D002211 ORTHO05D002206 1.6e-24 117.1 77 68.8
vmacro14694 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 2.1e-24 116.7 98 60.2
Gohir.A07G196800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.8e-24 116.3 94 57.4
Gorai.N003500 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.6e-24 115.9 78 66.7
Manes.13G054300 Manihot esculenta HOM05D002211 ORTHO05D002206 8.1e-24 114.8 97 57.7
Potri.002G250800 Populus trichocarpa HOM05D002211 ORTHO05D002206 8.1e-24 114.8 101 53.5
COL.COLO4_38590 Corchorus olitorius HOM05D002211 ORTHO05D002206 1.1e-23 114.4 78 66.7
Gohir.D07G167000 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.1e-23 114.4 93 59.1
Nitab4.5_0002463g0070 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.1e-23 114.4 103 56.3
Sabra02G0190700 Salix brachista HOM05D002211 ORTHO05D002206 1.1e-23 114.4 72 69.4
SGA_v2.0_scaffold77G25293 Striga asiatica HOM05D002211 ORTHO05D002206 1.1e-23 114.4 105 54.3
Gohir.A07G159400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.8e-23 113.6 93 58.1
HanXRQChr08g0231451 Helianthus annuus HOM05D002211 ORTHO05D002206 1.8e-23 113.6 75 68.0
ECA247G4066 Erigeron canadensis HOM05D002211 ORTHO05D002206 2.3e-23 113.2 108 55.6
Peaxi162Scf00335g00116 Petunia axillaris HOM05D002211 ORTHO05D002206 2.3e-23 113.2 106 52.8
CiPaw.14G043400 Carya illinoinensis HOM05D002211 ORTHO05D002206 3.1e-23 112.8 100 55.0
Gohir.A11G142300 Gossypium hirsutum HOM05D002211 ORTHO05D002206 3.1e-23 112.8 92 60.9
HanXRQChr16g0507881 Helianthus annuus HOM05D002211 ORTHO05D002206 3.1e-23 112.8 99 57.6
PGSC0003DMG400006602 Solanum tuberosum HOM05D002211 ORTHO05D002206 3.1e-23 112.8 85 61.2
Gorai.007G159300 Gossypium raimondii HOM05D002211 ORTHO05D002206 4.0e-23 112.5 92 60.9
Phvul.010G031300 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 4.0e-23 112.5 100 56.0
TPR.G28988 Trifolium pratense HOM05D002211 ORTHO05D002206 4.0e-23 112.5 98 59.2
Atru.chr6.3550 Acer truncatum HOM05D002211 ORTHO05D002206 5.2e-23 112.1 93 55.9
Nitab4.5_0005972g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 5.2e-23 112.1 81 64.2
CiPaw.13G055000 Carya illinoinensis HOM05D002211 ORTHO05D002206 6.8e-23 111.7 90 60.0
Oeu003632.1 Olea europaea HOM05D002211 ORTHO05D002206 6.8e-23 111.7 85 60.0
TWI36G0467 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 6.8e-23 111.7 101 59.4
Gorai.001G228600 Gossypium raimondii HOM05D002211 ORTHO05D002206 8.9e-23 111.3 95 52.6
Peaxi162Scf00335g00107 Petunia axillaris HOM05D002211 ORTHO05D002206 8.9e-23 111.3 105 55.2
VMungo0331G1849 Vigna mungo HOM05D002211 ORTHO05D002206 8.9e-23 111.3 104 53.8
Dinv10434 Davidia involucrata HOM05D002211 ORTHO05D002206 1.2e-22 110.9 117 53.8
FAN27G0804 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.2e-22 110.9 103 54.4
Sopen09g020090 Solanum pennellii HOM05D002211 ORTHO05D002206 1.2e-22 110.9 79 63.3
CANSAT01G1044 Cannabis sativa HOM05D002211 ORTHO05D002206 1.5e-22 110.5 77 63.6
Gohir.D07G203200 Gossypium hirsutum HOM05D002211 ORTHO05D002206 1.5e-22 110.5 95 52.6
Glyma.03G089800 Glycine max HOM05D002211 ORTHO05D002206 2.0e-22 110.2 104 53.8
RcHm_v2.0_Chr6g0282871 Rosa chinensis HOM05D002211 ORTHO05D002206 2.6e-22 109.8 103 54.4
SGA_v2.0_scaffold566G52949 Striga asiatica HOM05D002211 ORTHO05D002206 3.4e-22 109.4 84 63.1
TWI18G0790 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 3.4e-22 109.4 101 53.5
FvH4_2g17840 Fragaria vesca HOM05D002211 ORTHO05D002206 4.4e-22 109.0 99 58.6
Gohir.D11G148600 Gossypium hirsutum HOM05D002211 ORTHO05D002206 4.4e-22 109.0 92 58.7
Peaxi162Scf01242g00126 Petunia axillaris HOM05D002211 ORTHO05D002206 4.4e-22 109.0 107 54.2
Prupe.8G190600 Prunus persica HOM05D002211 ORTHO05D002206 4.4e-22 109.0 100 60.0
QL09p046170 Quercus lobata HOM05D002211 ORTHO05D002206 5.8e-22 108.6 92 58.7
Glyma.13G008000 Glycine max HOM05D002211 ORTHO05D002206 7.5e-22 108.2 104 52.9
Nitab4.5_0009151g0010 Nicotiana tabacum HOM05D002211 ORTHO05D002206 9.9e-22 107.8 75 66.7
FAN24G0249 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.3e-21 107.5 99 57.6
MD10G1152300 Malus domestica HOM05D002211 ORTHO05D002206 2.2e-21 106.7 103 56.3
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 2.9e-21 106.3 96 57.3
Nitab4.5_0000038g0090 Nicotiana tabacum HOM05D002211 ORTHO05D002206 2.9e-21 106.3 106 52.8
vmacro02814 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 2.9e-21 106.3 111 49.5
Ciclev10017076m.g Citrus clementina HOM05D002211 ORTHO05D002206 3.7e-21 105.9 93 58.1
Migut.D00729 Erythranthe guttata HOM05D002211 ORTHO05D002206 3.7e-21 105.9 74 66.2
FAN15G0122 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.7e-21 105.9 103 53.4
MD05G1159900 Malus domestica HOM05D002211 ORTHO05D002206 3.7e-21 105.9 103 53.4
Peaxi162Scf00335g00096 Petunia axillaris HOM05D002211 ORTHO05D002206 3.7e-21 105.9 106 53.8
Medtr8g011470 Medicago truncatula HOM05D002211 ORTHO05D002206 4.9e-21 105.5 101 55.4
PGSC0003DMG400020177 Solanum tuberosum HOM05D002211 ORTHO05D002206 6.4e-21 105.1 83 59.0
Solyc06g083080.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 8.3e-21 104.8 102 52.0
Sopen06g034470 Solanum pennellii HOM05D002211 ORTHO05D002206 1.1e-20 104.4 102 52.0
Lsat_1_v5_gn_5_178360 Lactuca sativa HOM05D002211 ORTHO05D002206 1.4e-20 104.0 81 58.0
Nitab4.5_0000038g0110 Nicotiana tabacum HOM05D002211 ORTHO05D002206 4.1e-20 102.4 67 70.1
Psat4g206640 Pisum sativum HOM05D002211 ORTHO05D002206 4.1e-20 102.4 106 52.8
Lalb_Chr03g0041111 Lupinus albus HOM05D002211 ORTHO05D002206 5.4e-20 102.1 85 54.1
Lalb_Chr01g0022001 Lupinus albus HOM05D002211 ORTHO05D002206 7.1e-20 101.7 86 54.7
MSTRG.21304 Avicennia marina HOM05D002211 ORTHO05D002206 9.2e-20 101.3 110 47.3
Nitab4.5_0005972g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 9.2e-20 101.3 102 52.0
Phvul.008G137200 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 9.2e-20 101.3 81 61.7
Lj3g0001912 Lotus japonicus HOM05D002211 ORTHO05D002206 1.2e-19 100.9 77 59.7
VMungo1383G1511 Vigna mungo HOM05D002211 ORTHO05D002206 1.6e-19 100.5 100 54.0
Eucgr.H00728 Eucalyptus grandis HOM05D002211 ORTHO05D002206 2.1e-19 100.1 98 53.1
AUR62008124 Chenopodium quinoa HOM05D002211 ORTHO05D002206 2.7e-19 99.8 114 50.0
Glyma.08G344400 Glycine max HOM05D002211 ORTHO05D002206 2.7e-19 99.8 88 54.5
PGR083G1506 Punica granatum HOM05D002211 ORTHO05D002206 2.7e-19 99.8 69 63.8
EL10Ac5g10628 Beta vulgaris HOM05D002211 ORTHO05D002206 7.8e-19 98.2 161 41.6
Glyma.18G152300 Glycine max HOM05D002211 ORTHO05D002206 1.0e-18 97.8 96 55.2
arahy.Tifrunner.gnm1.ann1.0TX68Y Arachis hypogaea HOM05D002211 ORTHO05D002206 2.3e-18 96.7 102 49.0
arahy.Tifrunner.gnm1.ann1.PCV855 Arachis hypogaea HOM05D002211 ORTHO05D002206 3.0e-18 96.3 112 44.6
MSTRG.18492 Avicennia marina HOM05D002211 ORTHO05D002206 3.9e-18 95.9 83 55.4
ECA248G1643 Erigeron canadensis HOM05D002211 ORTHO05D002206 1.1e-17 94.4 68 64.7
Ah.11g051060 Amaranthus hybridus HOM05D002435 ORTHO05D002550 2.5e-17 93.2 108 47.2
AT5G48500 Arabidopsis thaliana HOM05D002211 ORTHO05D002206 7.3e-17 91.7 85 52.9
THA.LOC104818996 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 9.5e-17 91.3 102 45.1
Ah.02g111170 Amaranthus hybridus HOM05D002211 ORTHO05D002206 1.2e-16 90.9 156 38.5
Hund09466 Selenicereus undatus HOM05D002211 ORTHO05D002206 1.6e-16 90.5 102 50.0
AL8G21370 Arabidopsis lyrata HOM05D002211 ORTHO05D002206 2.1e-16 90.1 85 51.8
CARHR183520 Cardamine hirsuta HOM05D002211 ORTHO05D002206 3.6e-16 89.4 85 51.8
ClCG09G008150 Citrullus lanatus HOM05D002211 ORTHO05D002206 3.6e-16 89.4 96 46.9
AUR62028703 Chenopodium quinoa HOM05D002211 ORTHO05D002206 4.7e-16 89.0 71 63.4
CsaV3_7G026890 Cucumis sativus L. HOM05D002211 ORTHO05D002206 4.7e-16 89.0 84 47.6
Lj1g0027803 Lotus japonicus HOM05D002211 ORTHO05D002206 4.7e-16 89.0 103 47.6
SHI10300 Sapria himalayana HOM05D002211 ORTHO05D002206 4.7e-16 89.0 141 39.7
Psat3g151120 Pisum sativum HOM05D002211 ORTHO05D002206 8.1e-16 88.2 89 47.2
HanXRQChr01g0007241 Helianthus annuus HOM05D002211 ORTHO05D002206 1.1e-15 87.8 64 60.9
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 1.4e-15 87.4 102 49.0
Sed0012250 Sechium edule HOM05D002211 ORTHO05D002206 1.8e-15 87.0 74 54.1
BcaC06g30788 Brassica carinata HOM05D002211 ORTHO05D002206 5.2e-15 85.5 106 46.2
A02p37510 Brassica napus HOM05D002211 ORTHO05D002206 1.2e-14 84.3 94 44.7
BraA06t26828Z Brassica rapa HOM05D002211 ORTHO05D002206 1.5e-14 84.0 152 35.5
A06p39140 Brassica napus HOM05D002211 ORTHO05D002206 2.0e-14 83.6 152 35.5
Carub.0008s0808 Capsella rubella HOM05D002211 ORTHO05D002206 3.4e-14 82.8 96 44.8
Sp2g18870 Schrenkiella parvula HOM05D002211 ORTHO05D002206 3.4e-14 82.8 76 52.6
BolC7t44440H Brassica oleracea HOM05D002211 ORTHO05D002206 5.8e-14 82.0 151 35.1
Eucgr.K02089 Eucalyptus grandis HOM05D002211 ORTHO05D002206 5.8e-14 82.0 66 60.6
BraA02t08738Z Brassica rapa HOM05D002211 ORTHO05D002206 7.6e-14 81.6 89 47.2
TPR.G26810 Trifolium pratense HOM05D002211 ORTHO05D002206 7.6e-14 81.6 90 44.4
Actinidia34547 Actinidia chinensis HOM05D002211 ORTHO05D002206 9.9e-14 81.3 74 55.4
Aa31sc1803G10 Aethionema arabicum HOM05D002211 ORTHO05D002206 9.9e-14 81.3 82 50.0
Thhalv10005044m.g Eutrema salsugineum HOM05D002211 ORTHO05D002206 9.9e-14 81.3 78 50.0
BcaC03g17656 Brassica carinata HOM05D002211 ORTHO05D002206 1.3e-13 80.9 82 47.6
C02p56580 Brassica napus HOM05D002211 ORTHO05D002206 1.3e-13 80.9 82 47.6
BolC2t11717H Brassica oleracea HOM05D002211 ORTHO05D002206 1.3e-13 80.9 82 47.6
Sed0022694 Sechium edule HOM05D002211 ORTHO05D002206 1.3e-13 80.9 133 38.3
BcaC06g30790 Brassica carinata HOM05D002211 ORTHO05D002206 1.7e-13 80.5 151 34.4
THA.LOC104822468 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 1.7e-13 80.5 73 52.1
C07p39190 Brassica napus HOM05D002211 ORTHO05D002206 2.9e-13 79.7 151 33.8
Sc17g0001700 Simmondsia chinensis HOM05D002211 ORTHO05D002206 2.9e-13 79.7 118 44.1
Actinidia23790 Actinidia chinensis HOM05D002211 ORTHO05D002206 3.8e-13 79.3 97 44.3
BcaC06g30792 Brassica carinata HOM05D002211 ORTHO05D002206 4.9e-13 79.0 76 52.6
SHI10255 Sapria himalayana HOM05D002211 ORTHO05D002206 4.9e-13 79.0 67 56.7
COL.COLO4_15265 Corchorus olitorius HOM05D002211 ORTHO05D002206 1.1e-12 77.8 78 55.1
Medtr7g052620 Medicago truncatula HOM05D002211 ORTHO05D002206 2.4e-12 76.6 106 37.7
Lalb_Chr07g0194521 Lupinus albus HOM05D002211 ORTHO05D002206 3.2e-12 76.3 103 38.8
Nn5g27522 Nelumbo nucifera HOM05D002211 ORTHO05D002206 9.2e-12 74.7 99 42.4
BcaB07g30027 Brassica carinata HOM05D002211 ORTHO05D002206 2.1e-11 73.6 94 42.6
TAR362G0774 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.3e-10 70.9 74 50.0
A09p04550 Brassica napus HOM05D002211 ORTHO05D002206 2.3e-10 70.1 102 36.3
BraA09t36090Z Brassica rapa HOM05D002211 ORTHO05D002206 2.3e-10 70.1 102 36.3
TAR633G0017 Trochodendron aralioides HOM05D002211 ORTHO05D002206 3.9e-10 69.3 74 48.6
Nn1g08275 Nelumbo nucifera HOM05D002211 ORTHO05D002206 8.7e-10 68.2 88 47.7
BcaC04g23772 Brassica carinata HOM05D002211 ORTHO05D002206 1.5e-09 67.4 105 38.1
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 1.5e-09 67.4 105 38.1
Nitab4.5_0002463g0080 Nicotiana tabacum HOM05D002211 ORTHO05D002206 1.9e-09 67.0 103 38.8
Lalb_Chr19g0126121 Lupinus albus HOM05D002211 ORTHO05D002206 2.5e-09 66.6 67 46.3
Manes.09G144900 Manihot esculenta HOM05D002211 ORTHO05D002206 1.4e-07 60.8 67 44.8
QL01p047517 Quercus lobata HOM05D002211 ORTHO05D002206 2.4e-07 60.1 76 39.5
TAR636G2930 Trochodendron aralioides HOM05D002211 ORTHO05D002206 6.9e-07 58.5 96 38.5
Aqoxy5G00107 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 1.2e-06 57.8 88 42.0
TAR365G0725 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.5e-06 57.4 65 44.6
Duzib128G1915 Durio zibethinus HOM05D002211 ORTHO05D002206 2.6e-06 56.6 73 37.0
Haze_04489 Corylus avellana HOM05D002211 ORTHO05D002206 3.4e-06 56.2 65 41.5
Aqoxy5G00111 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 4.4e-06 55.8 94 41.5
PSO170G3935 Papaver somniferum HOM05D002211 ORTHO05D002206 5.8e-06 55.5 85 42.4
Psat3g005480 Pisum sativum HOM05D002211 ORTHO05D002206 5.8e-06 55.5 101 34.7
PSO357G0293 Papaver somniferum HOM05D002211 ORTHO05D002206 9.9e-06 54.7 85 42.4


User provided reference genes

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