Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 1.8e-284 981.9 481 100.0
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 2.1e-152 543.1 511 54.8
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 6.9e-135 485.0 512 50.6
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 1.2e-126 457.6 492 49.2
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 1.2e-118 431.0 519 46.6
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 5.9e-118 428.7 517 47.4
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 5.9e-118 428.7 520 45.8
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 5.9e-118 428.7 520 46.0
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 3.8e-117 426.0 544 44.7
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 1.1e-116 424.5 517 46.8
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 2.1e-115 420.2 515 44.5
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 6.1e-115 418.7 518 45.6
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 3.9e-114 416.0 502 46.0
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 8.8e-114 414.8 464 48.5
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 3.3e-113 412.9 513 44.8
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 4.3e-113 412.5 522 45.0
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 5.7e-113 412.1 457 46.8
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 5.7e-113 412.1 502 44.4
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 2.2e-112 410.2 515 46.2
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 3.7e-112 409.5 504 43.5
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 4.8e-112 409.1 496 46.4
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 8.2e-112 408.3 516 45.9
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 8.2e-112 408.3 485 47.8
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 1.4e-111 407.5 504 46.0
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 1.4e-111 407.5 513 45.6
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 2.4e-111 406.8 516 44.4
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 4.1e-111 406.0 517 45.5
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 4.1e-111 406.0 515 45.6
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 9.1e-111 404.8 508 46.9
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 9.1e-111 404.8 513 45.2
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 1.2e-110 404.4 515 44.3
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 2.0e-110 403.7 522 45.0
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 2.0e-110 403.7 505 43.4
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 1.3e-109 401.0 516 45.3
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 1.3e-109 401.0 511 45.6
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 1.3e-109 401.0 496 45.2
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 2.2e-109 400.2 516 44.4
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 3.8e-109 399.4 509 46.2
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 3.8e-109 399.4 509 46.2
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 3.8e-109 399.4 487 45.8
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 5.0e-109 399.1 518 45.2
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 8.5e-109 398.3 519 44.1
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.4e-108 397.5 496 45.4
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 1.4e-108 397.5 516 44.4
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 2.5e-108 396.7 517 44.5
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 2.5e-108 396.7 552 41.8
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 4.2e-108 396.0 517 46.0
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 4.2e-108 396.0 513 43.3
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 1.2e-107 394.4 531 44.3
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 1.6e-107 394.0 520 44.4
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 3.6e-107 392.9 530 44.0
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 4.7e-107 392.5 514 44.7
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 4.7e-107 392.5 496 46.0
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 4.7e-107 392.5 512 44.5
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 6.1e-107 392.1 510 44.7
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 1.0e-106 391.3 525 43.2
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 1.0e-106 391.3 517 45.3
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 1.0e-106 391.3 511 44.2
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 6.7e-106 388.7 518 44.2
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 6.7e-106 388.7 497 43.7
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 6.7e-106 388.7 490 44.7
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.5e-105 387.5 520 44.4
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 3.3e-105 386.3 522 44.6
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 4.4e-105 386.0 508 42.5
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 4.4e-105 386.0 491 45.8
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 5.7e-105 385.6 492 46.3
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 7.4e-105 385.2 509 42.0
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 7.4e-105 385.2 513 42.3
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 1.3e-104 384.4 497 44.9
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 2.2e-104 383.6 488 46.7
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 2.8e-104 383.3 514 43.8
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 3.7e-104 382.9 520 44.0
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 4.8e-104 382.5 517 43.1
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 8.2e-104 381.7 521 42.2
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 7.0e-103 378.6 510 42.2
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 9.1e-103 378.3 461 47.7
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.2e-102 377.9 510 42.4
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 1.5e-102 377.5 513 43.5
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.0e-102 377.1 519 43.4
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 4.5e-102 375.9 519 43.2
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 5.9e-102 375.6 515 41.6
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 7.7e-102 375.2 492 43.5
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 1.0e-101 374.8 517 43.5
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 3.8e-101 372.9 510 42.7
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 5.0e-101 372.5 522 42.9
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 1.1e-100 371.3 524 41.8
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 1.9e-100 370.5 512 42.2
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 5.5e-100 369.0 514 42.2
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 1.0e-98 364.8 499 42.9
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 1.4e-98 364.4 484 43.4
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 2.6e-97 360.1 543 40.3
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 7.4e-97 358.6 516 42.2
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 2.8e-96 356.7 468 43.2
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 8.5e-93 345.1 442 44.1
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 2.5e-92 343.6 517 41.0
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 2.7e-91 340.1 483 42.4
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 6.1e-91 339.0 502 40.0
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 6.8e-90 335.5 468 43.8
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 1.5e-89 334.3 495 40.8
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 2.2e-88 330.5 508 40.4
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 2.2e-88 330.5 502 41.0
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 4.8e-88 329.3 494 39.3
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 9.1e-87 325.1 520 37.5
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 8.0e-83 312.0 407 44.0
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 1.4e-82 311.2 454 41.2
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 1.2e-81 308.1 523 36.5
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 4.9e-80 302.8 516 38.6
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.1e-79 301.6 547 37.3
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 2.9e-77 293.5 429 41.7
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 6.6e-77 292.4 484 39.3
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.5e-76 291.2 450 39.8
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 1.1e-63 248.4 520 33.7
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 3.9e-61 240.0 256 48.8
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 8.9e-58 228.8 522 28.7
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 1.6e-54 218.0 508 30.7
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 6.0e-54 216.1 498 30.9
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 5.1e-45 186.4 352 34.1
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 3.2e-39 167.2 242 38.4
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 5.4e-39 166.4 242 38.4
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 7.1e-39 166.0 150 54.0
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 1.0e-37 162.2 244 37.7
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 7.1e-31 139.4 263 33.1
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 3.3e-28 130.6 229 35.8
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 3.6e-27 127.1 117 50.4
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 8.1e-27 125.9 266 33.1
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 6.7e-21 106.3 359 24.2
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 1.5e-20 105.1 85 57.6
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 6.9e-18 96.3 183 39.3
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 3.8e-16 90.5 116 37.1
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 2.1e-11 74.7 194 27.8
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 4.8e-11 73.6 62 61.3
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 1.2e-06 58.9 52 53.8


User provided reference genes

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