Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 2.9e-102 375.2 184 100.0
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 5.9e-26 121.7 192 42.2
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 7.2e-24 114.8 187 41.2
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 1.6e-23 113.6 72 75.0
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 4.6e-23 112.1 68 82.4
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 6.1e-23 111.7 68 77.9
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 7.9e-23 111.3 80 68.8
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 1.0e-22 110.9 74 73.0
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 1.4e-22 110.5 66 80.3
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 1.4e-22 110.5 66 83.3
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 1.4e-22 110.5 67 79.1
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 1.8e-22 110.2 69 78.3
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.3e-22 109.8 68 79.4
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 2.3e-22 109.8 68 79.4
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 2.3e-22 109.8 65 80.0
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 2.3e-22 109.8 66 80.3
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 2.3e-22 109.8 69 78.3
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 2.3e-22 109.8 69 76.8
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 2.3e-22 109.8 124 50.8
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 3.0e-22 109.4 69 76.8
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 3.0e-22 109.4 68 76.5
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 3.0e-22 109.4 68 79.4
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 5.1e-22 108.6 102 56.9
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 5.1e-22 108.6 92 62.0
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 5.1e-22 108.6 69 78.3
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 5.1e-22 108.6 69 75.4
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 5.1e-22 108.6 69 76.8
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 6.7e-22 108.2 66 78.8
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 6.7e-22 108.2 69 76.8
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 6.7e-22 108.2 69 75.4
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 8.8e-22 107.8 69 78.3
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 8.8e-22 107.8 71 74.6
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 1.1e-21 107.5 69 76.8
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.1e-21 107.5 69 76.8
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.1e-21 107.5 69 76.8
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 1.1e-21 107.5 69 76.8
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 1.1e-21 107.5 64 81.2
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 1.1e-21 107.5 69 73.9
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.1e-21 107.5 65 81.5
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.5e-21 107.1 66 80.3
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.0e-21 106.7 66 77.3
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 2.5e-21 106.3 65 78.5
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 2.5e-21 106.3 66 77.3
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 2.5e-21 106.3 66 78.8
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 2.5e-21 106.3 66 78.8
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 3.3e-21 105.9 66 77.3
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 3.3e-21 105.9 63 82.5
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 3.3e-21 105.9 66 77.3
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.3e-21 105.9 66 75.8
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 4.3e-21 105.5 69 73.9
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 4.3e-21 105.5 70 75.7
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 4.3e-21 105.5 70 75.7
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 5.7e-21 105.1 69 72.5
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 5.7e-21 105.1 69 76.8
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 5.7e-21 105.1 69 76.8
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 5.7e-21 105.1 69 72.5
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 7.4e-21 104.8 65 76.9
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 9.7e-21 104.4 62 82.3
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 1.3e-20 104.0 69 73.9
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.3e-20 104.0 66 74.2
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 1.3e-20 104.0 66 75.8
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.7e-20 103.6 68 73.5
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.2e-20 103.2 71 70.4
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 2.2e-20 103.2 69 72.5
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 2.2e-20 103.2 66 74.2
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 2.2e-20 103.2 63 79.4
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 2.2e-20 103.2 63 79.4
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 2.2e-20 103.2 69 71.0
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 2.2e-20 103.2 66 77.3
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 3.7e-20 102.4 67 76.1
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 3.7e-20 102.4 66 75.8
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 4.8e-20 102.1 66 74.2
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 6.3e-20 101.7 66 72.7
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 6.3e-20 101.7 66 72.7
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 8.2e-20 101.3 69 71.0
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 8.2e-20 101.3 69 71.0
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 1.4e-19 100.5 69 71.0
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.4e-19 100.5 69 73.9
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 1.8e-19 100.1 66 74.2
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 2.4e-19 99.8 62 74.2
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 2.4e-19 99.8 68 75.0
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 3.1e-19 99.4 68 73.5
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 3.1e-19 99.4 70 72.9
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 4.1e-19 99.0 69 69.6
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 4.1e-19 99.0 61 75.4
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 5.3e-19 98.6 71 67.6
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 5.3e-19 98.6 62 77.4
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 5.3e-19 98.6 69 68.1
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 6.9e-19 98.2 69 73.9
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 6.9e-19 98.2 69 71.0
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 9.1e-19 97.8 62 75.8
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 1.2e-18 97.4 63 76.2
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 1.2e-18 97.4 64 75.0
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.2e-18 97.4 72 66.7
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.2e-18 97.4 66 72.7
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.2e-18 97.4 65 72.3
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.5e-18 97.1 59 78.0
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.0e-18 96.7 68 70.6
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 3.4e-18 95.9 63 73.0
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 3.4e-18 95.9 68 70.6
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 4.5e-18 95.5 68 69.1
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 4.5e-18 95.5 68 69.1
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 7.7e-18 94.7 62 74.2
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 7.7e-18 94.7 62 74.2
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 7.7e-18 94.7 62 74.2
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 7.7e-18 94.7 62 74.2
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 1.3e-17 94.0 64 67.2
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 2.2e-17 93.2 62 72.6
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 3.8e-17 92.4 79 60.8
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 6.1e-15 85.1 65 66.2
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 1.4e-14 84.0 63 66.7
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 1.8e-14 83.6 58 70.7
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 3.0e-14 82.8 61 67.2
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 1.1e-13 80.9 57 66.7
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.2e-12 76.6 57 64.9
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 5.0e-09 65.5 62 56.5


User provided reference genes

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