Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 3.2e-221 771.5 415 100.0
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 1.6e-124 450.3 418 63.6
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 2.8e-124 449.5 406 61.1
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.1e-123 447.6 421 58.4
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 6.4e-121 438.3 430 59.3
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 1.1e-120 437.6 384 63.3
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 4.6e-119 432.2 406 59.4
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 6.0e-119 431.8 420 57.4
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 2.3e-118 429.9 424 58.7
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 2.1e-116 423.3 422 58.3
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 3.6e-116 422.5 423 57.0
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 1.8e-115 420.2 406 57.6
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 1.5e-114 417.2 404 57.2
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.5e-114 417.2 414 56.5
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 2.0e-114 416.8 422 57.6
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 2.6e-114 416.4 406 57.4
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 2.6e-114 416.4 406 57.4
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 2.6e-114 416.4 422 57.6
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 3.4e-114 416.0 406 58.6
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 2.2e-113 413.3 430 57.2
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 1.9e-112 410.2 404 56.7
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 4.1e-112 409.1 379 61.2
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 5.4e-112 408.7 357 63.0
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 9.2e-112 407.9 426 56.6
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 1.6e-111 407.1 423 55.8
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 3.5e-111 406.0 381 58.5
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 3.5e-111 406.0 383 58.0
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 4.6e-111 405.6 384 58.9
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 6.0e-111 405.2 423 55.8
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 2.3e-110 403.3 407 56.5
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 2.3e-110 403.3 402 56.5
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 6.6e-110 401.7 406 55.4
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 8.6e-110 401.4 424 56.1
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.1e-109 401.0 432 55.1
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 1.5e-109 400.6 425 55.1
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 1.5e-109 400.6 408 57.1
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 7.3e-109 398.3 382 58.4
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 6.2e-108 395.2 450 52.7
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 1.8e-107 393.7 382 57.6
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 2.4e-107 393.3 412 55.6
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 3.1e-107 392.9 424 55.0
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 6.9e-107 391.7 382 56.5
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 8.9e-107 391.3 406 55.2
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 1.5e-106 390.6 406 53.9
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 1.5e-106 390.6 406 54.2
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 2.0e-106 390.2 406 53.9
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 2.6e-106 389.8 405 54.3
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 3.4e-106 389.4 479 49.9
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 5.8e-106 388.7 410 54.9
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 1.7e-105 387.1 425 53.6
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 2.9e-105 386.3 421 53.7
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 3.8e-105 386.0 381 56.7
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 4.9e-105 385.6 406 53.2
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 6.4e-105 385.2 420 52.4
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 1.4e-104 384.0 403 55.8
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 4.2e-104 382.5 405 55.3
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 5.4e-104 382.1 382 56.3
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 9.3e-104 381.3 332 62.7
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 2.7e-103 379.8 396 56.3
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 3.5e-103 379.4 404 56.4
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 1.0e-102 377.9 420 52.1
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 1.7e-102 377.1 413 54.2
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 1.7e-102 377.1 377 57.3
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.3e-102 376.7 380 55.3
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 3.0e-102 376.3 380 54.7
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 3.9e-102 375.9 380 55.5
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 5.1e-102 375.6 421 52.3
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 1.1e-101 374.4 405 51.9
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.5e-101 374.0 380 54.5
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 1.3e-100 370.9 411 52.6
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 2.1e-100 370.2 418 52.6
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 3.6e-100 369.4 355 56.9
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 5.8e-98 362.1 390 53.1
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 7.6e-98 361.7 381 53.8
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 1.3e-97 360.9 415 51.1
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 6.4e-97 358.6 412 51.5
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 2.4e-96 356.7 413 49.9
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 7.1e-96 355.1 352 57.4
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 7.1e-96 355.1 398 52.5
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 7.1e-96 355.1 404 51.0
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 6.0e-95 352.1 418 50.0
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 2.3e-94 350.1 384 50.8
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 1.2e-90 337.8 402 48.5
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 3.4e-90 336.3 407 48.4
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 4.5e-90 335.9 374 54.3
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 4.9e-89 332.4 376 53.2
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 4.9e-89 332.4 416 48.6
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 1.2e-87 327.8 373 49.9
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 1.2e-87 327.8 369 50.1
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 1.0e-86 324.7 436 48.4
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 1.8e-86 323.9 371 47.7
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 3.0e-86 323.2 513 42.1
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 1.1e-85 321.2 375 47.5
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 1.5e-85 320.9 371 48.5
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 1.5e-85 320.9 401 45.9
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 2.5e-85 320.1 371 49.1
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 9.6e-85 318.2 371 46.9
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 2.4e-83 313.5 330 53.6
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 2.0e-82 310.5 371 47.7
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 1.4e-80 304.3 375 46.9
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 3.5e-79 299.7 369 46.6
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 6.7e-78 295.4 376 45.5
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 8.2e-76 288.5 315 52.4
vmacro13220 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 1.3e-73 281.2 337 51.6
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 1.7e-73 280.8 338 51.8
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 1.4e-72 277.7 416 45.2
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 3.6e-71 273.1 413 44.1
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 4.6e-71 272.7 290 56.6
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 5.9e-66 255.8 335 47.2
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 4.4e-61 239.6 315 46.0
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 1.5e-58 231.1 285 50.5
CDE09G0708 Ceratophyllum demersum HOM05D005133 ORTHO05D006685 2.9e-57 226.9 316 46.5
RcHm_v2.0_Chr1g0358051 Rosa chinensis HOM05D005133 ORTHO05D006685 6.5e-57 225.7 342 45.6
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 1.1e-53 214.9 321 43.3
vmacro22850 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 2.6e-53 213.8 340 43.8
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 1.7e-52 211.1 233 56.7
PSO384G2230 Papaver somniferum HOM05D005133 ORTHO05D006685 7.0e-51 205.7 245 48.6
AagrBONN_evm.TU.Sc2ySwM_344.4499 Anthoceros agrestis HOM05D005133 ORTHO05D006685 1.7e-44 184.5 413 34.9
arahy.Tifrunner.gnm1.ann1.Z00T6Z Arachis hypogaea HOM05D005133 ORTHO05D006685 2.7e-42 177.2 221 46.6
Zm00001eb201120 Zea mays HOM05D005133 ORTHO05D006685 1.4e-30 138.3 152 49.3
Zm00001eb407270 Zea mays HOM05D005133 ORTHO05D006685 1.4e-30 138.3 152 49.3
SMO239G0112 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 2.9e-25 120.6 342 31.3
FAN03G0151 Fragaria x ananassa HOM05D005133 ORTHO05D006685 3.3e-24 117.1 131 45.8
CBR_g45167 Chara braunii HOM05D005133 ORTHO05D006685 9.5e-24 115.5 286 32.5
HanXRQChr04g0107751 Helianthus annuus HOM05D005133 ORTHO05D006685 2.6e-21 107.5 97 66.0
vmacro01745 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 9.8e-21 105.5 126 50.0
SHI13349 Sapria himalayana HOM05D005133 ORTHO05D006685 2.4e-19 100.9 142 45.1
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 3.5e-18 97.1 73 78.1
Gohir.A03G093200 Gossypium hirsutum HOM05D005133 ORTHO05D006685 5.9e-18 96.3 165 39.4
Glyma.11G125567 Glycine max HOM05D005133 ORTHO05D006685 1.0e-17 95.5 145 40.0
AUR62025074 Chenopodium quinoa HOM05D005133 ORTHO05D006685 4.0e-14 83.6 65 67.7
SMO117G0103 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 3.4e-13 80.5 165 38.2
C04p01870 Brassica napus HOM05D005133 ORTHO05D006685 4.9e-12 76.6 39 71.8
RcHm_v2.0_Chr1g0358101 Rosa chinensis HOM05D004139 ORTHO05D004873 2.3e-09 67.8 82 43.9
SMO114G0022 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 1.5e-08 65.1 101 41.6
Rhsim01G0167900 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.1e-07 59.3 42 78.6
FvH4_2g33570 Fragaria vesca HOM05D000073 ORTHO05D015767 3.1e-06 57.4 73 52.1


User provided reference genes

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