Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g329 Utricularia gibba HOM05D001992 ORTHO05D002199 1.9e-41 172.2 90 100.0
Migut.F00947 Erythranthe guttata HOM05D001992 ORTHO05D002199 1.5e-14 82.8 86 54.7
SGA_v2.0_scaffold59G20766 Striga asiatica HOM05D001992 ORTHO05D002199 1.9e-14 82.4 86 57.0
MSTRG.8574 Avicennia marina HOM05D001992 ORTHO05D002199 7.3e-14 80.5 88 53.4
PGSC0003DMG403003154 Solanum tuberosum HOM05D001992 ORTHO05D002199 2.4e-12 75.5 88 50.0
Actinidia08744 Actinidia chinensis HOM05D001992 ORTHO05D002199 5.3e-12 74.3 86 52.3
Solyc03g097020.4 Solanum lycopersicum HOM05D001992 ORTHO05D002199 5.3e-12 74.3 88 48.9
SalBow2G0164 Salvia bowleyana HOM05D001992 ORTHO05D002199 1.2e-11 73.2 86 54.7
GSVIVG01024407001 Vitis vinifera HOM05D001992 ORTHO05D002199 1.2e-11 73.2 88 50.0
Actinidia34307 Actinidia chinensis HOM05D001992 ORTHO05D002199 2.6e-11 72.0 86 51.2
Nitab4.5_0011186g0010 Nicotiana tabacum HOM05D001992 ORTHO05D002199 9.9e-11 70.1 93 51.6
Actinidia18706 Actinidia chinensis HOM05D001992 ORTHO05D002199 1.3e-10 69.7 90 52.2
Sopen03g027770 Solanum pennellii HOM05D001992 ORTHO05D002199 1.7e-10 69.3 88 46.6
SGA_v2.0_scaffold50G18441 Striga asiatica HOM05D001992 ORTHO05D002199 2.2e-10 68.9 86 51.2
Migut.F00096 Erythranthe guttata HOM05D001992 ORTHO05D002199 4.9e-10 67.8 91 51.6
CDE06G1930 Ceratophyllum demersum HOM05D001992 ORTHO05D002199 8.4e-10 67.0 86 47.7
CiPaw.06G032700 Carya illinoinensis HOM05D001992 ORTHO05D002199 3.2e-09 65.1 100 45.0
Oeu062815.1 Olea europaea HOM05D001992 ORTHO05D002199 3.2e-09 65.1 88 48.9
Ciclev10019245m.g Citrus clementina HOM05D001992 ORTHO05D002199 4.2e-09 64.7 98 48.0
Nn3g19355 Nelumbo nucifera HOM05D001992 ORTHO05D002199 5.4e-09 64.3 86 45.3
Rhsim03G0221500 Rhododendron simsii HOM05D001992 ORTHO05D002199 5.4e-09 64.3 91 46.2
vmacro22174 Vaccinium macrocarpon HOM05D001992 ORTHO05D002199 7.1e-09 63.9 89 47.2
CDE03G0172 Ceratophyllum demersum HOM05D001992 ORTHO05D016835 9.3e-09 63.5 86 46.5
Nn1g01899 Nelumbo nucifera HOM05D001992 ORTHO05D002199 9.3e-09 63.5 88 44.3
TWI60G1475 Tripterygium wilfordii HOM05D001992 ORTHO05D002199 1.2e-08 63.2 96 46.9
SGA_v2.0_scaffold18G08510 Striga asiatica HOM05D001992 ORTHO05D002199 1.6e-08 62.8 88 45.5
HPP92_014700 Vanilla planifolia HOM05D001992 ORTHO05D002199 1.6e-08 62.8 95 43.2
CiPaw.05G219800 Carya illinoinensis HOM05D001992 ORTHO05D002199 3.5e-08 61.6 96 49.0
ATR0332G044 Amborella trichopoda HOM05D001992 ORTHO05D002199 4.6e-08 61.2 80 51.2
CSS0028493 Camellia sinensis var. sinensis HOM05D001992 ORTHO05D002199 6.0e-08 60.8 87 47.1
Lalb_Chr01g0000911 Lupinus albus HOM05D001992 ORTHO05D002199 7.8e-08 60.5 92 43.5
Hma1.2p1_1680F.1_g297190 Hydrangea macrophylla HOM05D001992 ORTHO05D002199 1.0e-07 60.1 88 44.3
DCAR_020408 Daucus carota HOM05D001992 ORTHO05D002199 2.3e-07 58.9 87 44.8
Manes.06G171600 Manihot esculenta HOM05D001992 ORTHO05D002199 2.3e-07 58.9 105 41.9
Thhalv10012943m.g Eutrema salsugineum HOM05D001992 ORTHO05D002199 3.9e-07 58.2 88 50.0
QL09p023805 Quercus lobata HOM05D001992 ORTHO05D002199 3.9e-07 58.2 93 44.1
CDE06G1003 Ceratophyllum demersum HOM05D001992 ORTHO05D002199 6.6e-07 57.4 85 44.7
Carub.0006s1514 Capsella rubella HOM05D001992 ORTHO05D002199 8.7e-07 57.0 101 45.5
Cc00_g28880 Coffea canephora HOM05D001992 ORTHO05D002199 8.7e-07 57.0 84 47.6
Dinv17256 Davidia involucrata HOM05D001992 ORTHO05D002199 1.5e-06 56.2 99 39.4
TAR375G0021 Trochodendron aralioides HOM05D001992 ORTHO05D002199 1.9e-06 55.8 90 41.1
EL10Ac3g05076 Beta vulgaris HOM05D001992 ORTHO05D002199 2.5e-06 55.5 89 40.4
Sc19g0000170 Simmondsia chinensis HOM05D001992 ORTHO05D002199 2.5e-06 55.5 95 44.2
AT5G16930 Arabidopsis thaliana HOM05D001992 ORTHO05D002199 3.3e-06 55.1 101 43.6
ClCG02G007670 Citrullus lanatus HOM05D001992 ORTHO05D002199 3.3e-06 55.1 92 41.3
Rhsim09G0212800 Rhododendron simsii HOM05D001992 ORTHO05D002199 3.3e-06 55.1 81 49.4
A10p22320 Brassica napus HOM05D001992 ORTHO05D002199 4.3e-06 54.7 84 47.6
BraA10t44291Z Brassica rapa HOM05D001992 ORTHO05D002199 4.3e-06 54.7 89 47.2
FAN01G0040 Fragaria x ananassa HOM05D001992 ORTHO05D002199 4.3e-06 54.7 96 43.8
AL6G27930 Arabidopsis lyrata HOM05D001992 ORTHO05D002199 5.6e-06 54.3 101 43.6
TWI34G1615 Tripterygium wilfordii HOM05D001992 ORTHO05D002199 5.6e-06 54.3 92 42.4
Aa31LG5G13540 Aethionema arabicum HOM05D001992 ORTHO05D002199 7.3e-06 53.9 83 47.0
Duzib177G0814 Durio zibethinus HOM05D001992 ORTHO05D002199 7.3e-06 53.9 93 41.9
ECA232G0118 Erigeron canadensis HOM05D001992 ORTHO05D002199 9.6e-06 53.5 60 53.3
MBI04_g20980_MAGBIO Magnolia biondii HOM05D001992 ORTHO05D002199 9.6e-06 53.5 79 44.3


User provided reference genes

Program Settings