Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g313 Utricularia gibba HOM05D004023 ORTHO05D004681 2.0e-141 505.8 251 100.0
MSTRG.18474 Avicennia marina HOM05D004023 ORTHO05D004681 3.6e-87 325.5 265 63.8
Cc01_g06740 Coffea canephora HOM05D004023 ORTHO05D004681 7.9e-82 307.8 265 60.8
Migut.D00690 Erythranthe guttata HOM05D004023 ORTHO05D004681 3.0e-81 305.8 265 60.4
Eucgr.J00649 Eucalyptus grandis HOM05D004023 ORTHO05D004681 3.9e-81 305.4 232 64.2
Hma1.2p1_1711F.1_g298750 Hydrangea macrophylla HOM05D004023 ORTHO05D004681 1.1e-80 303.9 280 55.4
unitig_60.g25636 Utricularia gibba HOM05D004023 ORTHO05D004681 3.3e-80 302.4 289 59.5
PGR119G0815 Punica granatum HOM05D004023 ORTHO05D004681 5.6e-80 301.6 268 57.8
vmacro04098 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 7.4e-80 301.2 275 60.0
Rhsim13G0202100 Rhododendron simsii HOM05D004023 ORTHO05D004681 3.7e-79 298.9 284 57.4
Sopen12g034560 Solanum pennellii HOM05D004023 ORTHO05D004681 6.2e-79 298.1 265 59.6
Solyc12g099940.2 Solanum lycopersicum HOM05D004023 ORTHO05D004681 1.1e-78 297.4 265 59.6
GSVIVG01037415001 Vitis vinifera HOM05D004023 ORTHO05D004681 4.0e-78 295.4 253 61.7
PGSC0003DMG400004653 Solanum tuberosum HOM05D004023 ORTHO05D004681 2.6e-77 292.7 265 58.9
CAN.G484.8 Capsicum annuum HOM05D004023 ORTHO05D004681 2.9e-76 289.3 265 58.5
TAR369G0443 Trochodendron aralioides HOM05D004023 ORTHO05D004681 8.4e-76 287.7 256 59.0
Ah.03g147260 Amaranthus hybridus HOM05D004023 ORTHO05D004681 3.2e-75 285.8 257 57.6
Hund12723 Selenicereus undatus HOM05D004023 ORTHO05D004681 7.1e-75 284.6 248 58.5
AUR62017796 Chenopodium quinoa HOM05D004023 ORTHO05D004681 2.1e-74 283.1 251 57.8
Actinidia24483 Actinidia chinensis HOM05D004023 ORTHO05D004681 1.3e-73 280.4 264 56.8
AUR62003487 Chenopodium quinoa HOM05D004023 ORTHO05D004681 1.8e-73 280.0 251 58.2
Aqoxy1G00042 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 3.3e-72 275.8 258 56.2
Nitab4.5_0001925g0260 Nicotiana tabacum HOM05D004023 ORTHO05D004681 7.4e-72 274.6 242 60.3
PSO384G4677 Papaver somniferum HOM05D004023 ORTHO05D004681 7.4e-72 274.6 255 57.3
SGA_v2.0_scaffold29G12111 Striga asiatica HOM05D004023 ORTHO05D004681 9.6e-72 274.2 336 49.7
PSO339G3635 Papaver somniferum HOM05D004023 ORTHO05D004681 2.8e-71 272.7 256 57.0
MBI13_g41748_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 3.4e-69 265.8 238 58.8
DCAR_006328 Daucus carota HOM05D004023 ORTHO05D004681 8.4e-68 261.2 236 58.1
ATR1096G005 Amborella trichopoda HOM05D004023 ORTHO05D004681 7.4e-64 248.1 266 50.0
EL10Ac6g15385 Beta vulgaris HOM05D004023 ORTHO05D004681 5.9e-61 238.4 314 45.9
SEGI_14760 Sequoiadendron giganteum HOM05D004023 ORTHO05D004681 1.4e-59 233.8 277 46.9
Lj2C939G1 Lonicera japonica HOM05D004023 ORTHO05D004681 1.6e-58 230.3 164 70.7
Nitab4.5_0011805g0030 Nicotiana tabacum HOM05D004023 ORTHO05D004681 2.7e-58 229.6 157 70.7
Peaxi162Scf00062g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 1.4e-57 227.3 333 42.9
HanXRQChr14g0431991 Helianthus annuus HOM05D004023 ORTHO05D004681 7.4e-56 221.5 227 51.5
SalBow6G6388 Salvia bowleyana HOM05D004023 ORTHO05D004681 2.2e-55 219.9 158 67.1
Nn7g37124 Nelumbo nucifera HOM05D004023 ORTHO05D004681 1.2e-53 214.2 161 63.4
CDE05G3056 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 1.0e-52 211.1 220 50.9
AL3G43670 Arabidopsis lyrata HOM05D004023 ORTHO05D004681 8.5e-52 208.0 227 49.8
AT2G06025 Arabidopsis thaliana HOM05D004023 ORTHO05D004681 3.2e-51 206.1 227 48.5
CARHR103710 Cardamine hirsuta HOM05D004023 ORTHO05D004681 6.1e-50 201.8 271 41.7
CiPaw.03G206900 Carya illinoinensis HOM05D004023 ORTHO05D004681 7.9e-50 201.4 243 44.9
Sp3g24610 Schrenkiella parvula HOM05D004023 ORTHO05D004681 1.0e-49 201.1 257 43.2
BcaB06g26883 Brassica carinata HOM05D004023 ORTHO05D004681 2.3e-49 199.9 226 48.7
ATR0598G151 Amborella trichopoda HOM05D004023 ORTHO05D004681 3.0e-49 199.5 207 50.7
Carub.0003s2716 Capsella rubella HOM05D004023 ORTHO05D004681 3.0e-49 199.5 265 43.0
TAR383G0448 Trochodendron aralioides HOM05D004023 ORTHO05D004681 3.9e-49 199.1 261 41.8
Lsat_1_v5_gn_2_38101 Lactuca sativa HOM05D004023 ORTHO05D004681 5.1e-49 198.7 227 48.5
BcaC06g35952 Brassica carinata HOM05D004023 ORTHO05D004681 1.5e-48 197.2 218 49.1
THA.LOC104826588 Tarenaya hassleriana HOM05D004023 ORTHO05D004681 2.0e-48 196.8 219 48.9
A07p06280 Brassica napus HOM05D004023 ORTHO05D004681 2.6e-48 196.4 218 49.1
BraA07t28423Z Brassica rapa HOM05D004023 ORTHO05D004681 2.6e-48 196.4 218 49.1
Aa31sc133G50 Aethionema arabicum HOM05D004023 ORTHO05D004681 5.7e-48 195.3 226 46.5
CSS0012197 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.7e-47 193.7 211 48.8
BolC7t41351H Brassica oleracea HOM05D004023 ORTHO05D004681 2.2e-47 193.4 218 48.2
Lalb_Chr08g0232581 Lupinus albus HOM05D004023 ORTHO05D004681 2.2e-47 193.4 224 46.0
Phvul.009G227400 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 2.2e-47 193.4 221 45.7
Eucgr.C00816 Eucalyptus grandis HOM05D004023 ORTHO05D004681 3.7e-47 192.6 234 44.0
VMungo1309G2832 Vigna mungo HOM05D004023 ORTHO05D004681 4.8e-47 192.2 202 50.0
CSS0007502 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 8.2e-47 191.4 224 47.3
Peaxi162Scf00554g00920 Petunia axillaris HOM05D004023 ORTHO05D004681 8.2e-47 191.4 219 48.9
CSS0019806 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.4e-46 190.7 224 46.9
GSVIVG01015086001 Vitis vinifera HOM05D004023 ORTHO05D004681 5.3e-46 188.7 219 47.5
Glyma.15G177500 Glycine max HOM05D004023 ORTHO05D004681 7.0e-46 188.3 203 48.8
Ciclev10009135m.g Citrus clementina HOM05D004023 ORTHO05D004681 9.1e-46 188.0 217 47.5
Glyma.09G069500 Glycine max HOM05D004023 ORTHO05D004681 9.1e-46 188.0 210 47.1
arahy.Tifrunner.gnm1.ann1.KDYD97 Arachis hypogaea HOM05D004023 ORTHO05D004681 1.2e-45 187.6 223 43.9
CSS0006992 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 1.6e-45 187.2 224 46.4
Atru.chr7.1700 Acer truncatum HOM05D004023 ORTHO05D004681 2.0e-45 186.8 209 49.3
arahy.Tifrunner.gnm1.ann1.XHC94G Arachis hypogaea HOM05D004023 ORTHO05D004681 2.6e-45 186.4 222 43.7
Dinv42390 Davidia involucrata HOM05D004023 ORTHO05D004681 2.6e-45 186.4 217 46.5
Medtr2g041620 Medicago truncatula HOM05D004023 ORTHO05D004681 3.5e-45 186.0 208 45.7
Thecc.09G077600 Theobroma cacao HOM05D004023 ORTHO05D004681 3.5e-45 186.0 218 45.9
Ca_23416_v3 Cicer arietinum L. HOM05D004023 ORTHO05D004681 4.5e-45 185.7 209 45.5
TPR.G28584 Trifolium pratense HOM05D004023 ORTHO05D004681 4.5e-45 185.7 208 44.7
Lj6g0013866 Lotus japonicus HOM05D004023 ORTHO05D004681 7.7e-45 184.9 209 46.9
CsaV3_1G041000 Cucumis sativus L. HOM05D004023 ORTHO05D004681 1.0e-44 184.5 221 43.9
Psat1g134240 Pisum sativum HOM05D004023 ORTHO05D004681 1.0e-44 184.5 202 46.5
Actinidia07003 Actinidia chinensis HOM05D004023 ORTHO05D004681 1.3e-44 184.1 169 57.4
arahy.Tifrunner.gnm1.ann1.KW18SN Arachis hypogaea HOM05D004023 ORTHO05D004681 2.2e-44 183.3 245 42.4
MD02G1091000 Malus domestica HOM05D004023 ORTHO05D004681 2.9e-44 183.0 222 45.5
Nitab4.5_0005767g0010 Nicotiana tabacum HOM05D004023 ORTHO05D004681 2.9e-44 183.0 219 47.5
Thhalv10002632m.g Eutrema salsugineum HOM05D004023 ORTHO05D004681 3.8e-44 182.6 226 45.6
Cfa002993 Carpinus fangiana HOM05D004023 ORTHO05D004681 5.0e-44 182.2 220 44.5
Actinidia29930 Actinidia chinensis HOM05D004023 ORTHO05D004681 1.5e-43 180.6 248 44.8
Haze_26009 Corylus avellana HOM05D004023 ORTHO05D004681 1.5e-43 180.6 220 44.1
QL11p000695 Quercus lobata HOM05D004023 ORTHO05D004681 1.5e-43 180.6 251 41.0
ECA240G3187 Erigeron canadensis HOM05D004023 ORTHO05D004681 1.9e-43 180.3 220 46.8
Potri.006G142100 Populus trichocarpa HOM05D004023 ORTHO05D004681 1.9e-43 180.3 220 44.1
MD15G1217100 Malus domestica HOM05D004023 ORTHO05D004681 4.2e-43 179.1 222 45.5
Sabra06G0111200 Salix brachista HOM05D004023 ORTHO05D004681 5.5e-43 178.7 220 43.6
Cc06_g12120 Coffea canephora HOM05D004023 ORTHO05D004681 9.4e-43 177.9 235 44.3
Prupe.7G199400 Prunus persica HOM05D004023 ORTHO05D004681 9.4e-43 177.9 221 42.1
Aqoxy7G01044 Aquilegia oxysepala HOM05D004023 ORTHO05D004681 1.6e-42 177.2 231 43.3
Gohir.A06G076200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 2.1e-42 176.8 218 44.0
HanXRQChr09g0237831 Helianthus annuus HOM05D004023 ORTHO05D004681 2.7e-42 176.4 220 45.5
MBI13_g42818_MAGBIO Magnolia biondii HOM05D004023 ORTHO05D004681 4.7e-42 175.6 205 44.9
AUR62028938 Chenopodium quinoa HOM05D004023 ORTHO05D004681 6.1e-42 175.3 221 44.3
Os03g0177000 Oryza sativa ssp. japonica HOM05D004023 ORTHO05D004681 8.0e-42 174.9 219 45.7
PGSC0003DMG400027761 Solanum tuberosum HOM05D004023 ORTHO05D004681 8.0e-42 174.9 220 45.0
DCAR_031922 Daucus carota HOM05D004023 ORTHO05D004681 1.4e-41 174.1 220 43.2
AUR62025247 Chenopodium quinoa HOM05D004023 ORTHO05D004681 4.0e-41 172.6 221 43.9
Gorai.010G088100 Gossypium raimondii HOM05D004023 ORTHO05D004681 4.0e-41 172.6 203 45.3
EL10Ac8g19063 Beta vulgaris HOM05D004023 ORTHO05D004681 2.0e-40 170.2 193 46.6
Lsat_1_v5_gn_7_35101 Lactuca sativa HOM05D004023 ORTHO05D004681 2.0e-40 170.2 220 45.0
CDE05G0867 Ceratophyllum demersum HOM05D004023 ORTHO05D004681 9.7e-40 167.9 183 49.2
Zm00001eb401920 Zea mays HOM05D004023 ORTHO05D004681 2.2e-39 166.8 223 43.9
HPP92_013291 Vanilla planifolia HOM05D004023 ORTHO05D004681 2.8e-39 166.4 201 44.3
DCAR_024747 Daucus carota HOM05D004023 ORTHO05D004681 6.3e-39 165.2 203 43.8
TWI63G1612 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 1.1e-38 164.5 220 42.7
TWI34G0375 Tripterygium wilfordii HOM05D004023 ORTHO05D004681 4.1e-38 162.5 222 40.5
Nitab4.5_0000024g0190 Nicotiana tabacum HOM05D004023 ORTHO05D004681 7.0e-38 161.8 242 41.3
Sed0007208 Sechium edule HOM05D004023 ORTHO05D004681 9.1e-38 161.4 207 41.1
C07p09330 Brassica napus HOM05D004023 ORTHO05D004681 1.6e-37 160.6 126 61.1
Sopen05g021320 Solanum pennellii HOM05D004023 ORTHO05D004681 1.6e-37 160.6 219 42.5
Solyc05g025890.3 Solanum lycopersicum HOM05D004023 ORTHO05D004681 2.0e-37 160.2 219 42.5
PGR142G0045 Punica granatum HOM05D004023 ORTHO05D004681 2.7e-37 159.8 202 44.1
Hund08779 Selenicereus undatus HOM05D004023 ORTHO05D004681 3.5e-37 159.5 128 58.6
CSS0047726 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 4.5e-37 159.1 227 41.4
Lj2C946G11 Lonicera japonica HOM05D004023 ORTHO05D004681 1.0e-36 157.9 152 56.6
Glyma.13G110200 Glycine max HOM05D004023 ORTHO05D004681 1.3e-36 157.5 226 40.7
CANSAT56G0673 Cannabis sativa HOM05D004023 ORTHO05D004681 3.8e-36 156.0 209 43.5
Sc18g0002510 Simmondsia chinensis HOM05D004023 ORTHO05D004681 8.5e-36 154.8 222 41.4
FAN23G1893 Fragaria x ananassa HOM05D004023 ORTHO05D004681 1.5e-35 154.1 224 39.3
RcHm_v2.0_Chr2g0094881 Rosa chinensis HOM05D004023 ORTHO05D004681 3.2e-35 152.9 224 40.2
FvH4_1g08620 Fragaria vesca HOM05D004023 ORTHO05D004681 5.5e-35 152.1 224 39.3
FAN19G1115 Fragaria x ananassa HOM05D004023 ORTHO05D004681 5.5e-35 152.1 224 39.3
FAN28G2268 Fragaria x ananassa HOM05D004023 ORTHO05D004681 7.2e-35 151.8 224 38.8
FAN26G1792 Fragaria x ananassa HOM05D004023 ORTHO05D004681 9.4e-35 151.4 275 34.5
FAN26G3281 Fragaria x ananassa HOM05D004023 ORTHO05D004681 9.4e-35 151.4 275 34.5
Duzib168G1033 Durio zibethinus HOM05D004023 ORTHO05D004681 1.2e-34 151.0 198 41.9
Manes.03G040200 Manihot esculenta HOM05D004023 ORTHO05D004681 2.7e-34 149.8 198 42.4
Migut.L01563 Erythranthe guttata HOM05D004023 ORTHO05D004681 1.4e-33 147.5 200 41.0
Gohir.D06G075200 Gossypium hirsutum HOM05D004023 ORTHO05D004681 1.4e-33 147.5 126 56.3
Gorai.013G224500 Gossypium raimondii HOM05D004023 ORTHO05D004681 5.2e-33 145.6 222 38.7
MELO3C015518.2 Cucumis melo HOM05D004023 ORTHO05D004681 1.5e-32 144.1 125 53.6
Gohir.D13G196385 Gossypium hirsutum HOM05D004023 ORTHO05D004681 1.5e-32 144.1 222 38.3
Gohir.A13G191000 Gossypium hirsutum HOM05D004023 ORTHO05D004681 3.4e-32 142.9 222 37.8
ClCG03G015110 Citrullus lanatus HOM05D004023 ORTHO05D004681 1.7e-31 140.6 247 34.8
Zm00001eb401960 Zea mays HOM05D004023 ORTHO05D004681 2.8e-31 139.8 199 43.2
Phvul.003G131100 Phaseolus vulgaris HOM05D004023 ORTHO05D004681 3.1e-30 136.3 238 37.0
SMO200G0269 Selaginella moellendorffii HOM05D004023 ORTHO05D004681 3.5e-29 132.9 177 42.4
Mapoly0023s0080 Marchantia polymorpha HOM05D004023 ORTHO05D004681 4.5e-29 132.5 267 34.1
SalBow5G0641 Salvia bowleyana HOM05D004023 ORTHO05D004681 1.9e-27 127.1 200 37.0
PSO063G3828 Papaver somniferum HOM05D004023 ORTHO05D004681 3.2e-27 126.3 210 35.7
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 4.2e-27 125.9 213 36.6
Rhsim03G0227800 Rhododendron simsii HOM05D004023 ORTHO05D004681 1.6e-26 124.0 252 33.7
Sed0008804 Sechium edule HOM05D004023 ORTHO05D004681 4.0e-25 119.4 215 34.9
Nn8g38657 Nelumbo nucifera HOM05D004023 ORTHO05D004681 5.2e-25 119.0 175 44.0
Lj4A912T25 Lonicera japonica HOM05D004023 ORTHO05D004681 1.3e-23 114.4 226 34.1
Zm00001eb408770 Zea mays HOM05D004023 ORTHO05D004681 1.3e-23 114.4 106 54.7
CSS0000978 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 5.4e-22 109.0 168 41.1
Glyma.17G049500 Glycine max HOM05D004023 ORTHO05D004681 7.0e-22 108.6 169 39.6
Pp3c12_9920 Physcomitrium patens HOM05D004023 ORTHO05D004681 1.7e-20 104.0 197 36.0
vmacro06339 Vaccinium macrocarpon HOM05D004023 ORTHO05D004681 2.3e-20 103.6 244 33.2
PSO339G4574 Papaver somniferum HOM05D004023 ORTHO05D004681 1.2e-16 91.3 201 30.8
CBR_g23678 Chara braunii HOM05D004023 ORTHO05D004681 1.3e-15 87.8 186 33.9
PSO384G0928 Papaver somniferum HOM05D004023 ORTHO05D004681 1.2e-13 81.3 202 31.2
PSO384G3720 Papaver somniferum HOM05D004023 ORTHO05D004681 1.2e-13 81.3 202 31.2
arahy.Tifrunner.gnm1.ann1.NU1P8G Arachis hypogaea HOM05D004023 ORTHO05D004681 4.7e-10 69.3 220 27.7
Cpa.g.sc28.45 Carica papaya HOM05D004023 ORTHO05D004681 5.2e-09 65.9 169 31.4
Lalb_Chr12g0200121 Lupinus albus HOM05D004023 ORTHO05D004681 5.2e-09 65.9 58 53.4
MCO01G622 Micromonas commoda HOM05D004023 ORTHO05D004681 1.2e-08 64.7 198 27.3
Oeu020552.2 Olea europaea HOM05D004023 ORTHO05D004681 1.5e-08 64.3 103 38.8
Oeu013106.1 Olea europaea HOM05D004023 ORTHO05D004681 9.8e-08 61.6 46 58.7
Sp7g25980 Schrenkiella parvula HOM05D005733 ORTHO05D007442 1.3e-07 61.2 213 25.8
PSO339G0741 Papaver somniferum HOM05D004023 ORTHO05D004681 1.7e-07 60.8 105 37.1
Glyma.08G144367 Glycine max HOM05D004023 ORTHO05D004681 2.9e-07 60.1 61 52.5
Hund08988 Selenicereus undatus HOM05D005733 ORTHO05D007442 2.9e-07 60.1 186 28.5
CARHR235730 Cardamine hirsuta HOM05D005733 ORTHO05D007442 6.4e-07 58.9 211 27.5
Thhalv10025984m.g Eutrema salsugineum HOM05D005733 ORTHO05D007442 6.4e-07 58.9 224 25.4
PSO478G2869 Papaver somniferum HOM05D004023 ORTHO05D004681 6.4e-07 58.9 120 35.0
Carub.0007s1276 Capsella rubella HOM05D005733 ORTHO05D007442 1.9e-06 57.4 188 27.7
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 1.9e-06 57.4 150 30.0
THA.LOC104811821 Tarenaya hassleriana HOM05D005733 ORTHO05D007442 3.2e-06 56.6 202 26.2
AL7G24580 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 4.1e-06 56.2 185 27.6
Lsat_1_v5_gn_8_64360 Lactuca sativa HOM05D005733 ORTHO05D007442 4.1e-06 56.2 178 28.7
Cc06_g14000 Coffea canephora HOM05D005733 ORTHO05D007442 9.2e-06 55.1 203 28.1


User provided reference genes

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