Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 9.1e-172 606.7 280 100.0
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 1.9e-97 359.8 232 68.5
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 8.5e-93 344.4 237 67.9
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 1.1e-89 334.0 235 65.5
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 1.7e-85 320.1 228 63.6
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 1.2e-83 313.9 227 59.5
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 3.6e-83 312.4 227 60.8
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 4.7e-83 312.0 234 62.4
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 3.9e-82 308.9 228 61.0
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 5.1e-82 308.5 220 62.3
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 5.1e-82 308.5 225 60.0
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 1.5e-81 307.0 225 60.4
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 2.0e-81 306.6 229 59.0
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 2.6e-81 306.2 211 63.5
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 2.6e-81 306.2 228 61.4
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 3.3e-81 305.8 228 60.1
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 4.4e-81 305.4 227 60.4
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 5.7e-81 305.1 226 60.2
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 7.4e-81 304.7 230 58.3
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 1.7e-80 303.5 223 61.9
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 2.8e-80 302.8 210 63.8
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 2.8e-80 302.8 231 61.5
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.4e-79 300.4 230 60.4
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.4e-79 300.4 230 60.4
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 1.8e-79 300.1 236 59.7
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 5.3e-79 298.5 229 58.1
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 9.1e-79 297.7 251 54.6
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 9.1e-79 297.7 224 59.8
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 1.2e-78 297.4 229 60.3
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 2.6e-78 296.2 224 58.5
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 2.6e-78 296.2 223 59.6
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 4.5e-78 295.4 239 54.4
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 3.8e-77 292.4 232 59.1
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 3.8e-77 292.4 226 56.2
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 3.8e-77 292.4 229 56.8
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 6.5e-77 291.6 232 59.1
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 1.1e-76 290.8 234 57.3
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 2.5e-76 289.7 229 57.2
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 3.2e-76 289.3 224 60.3
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 4.2e-76 288.9 224 60.3
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 5.5e-76 288.5 207 62.3
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 5.5e-76 288.5 207 61.8
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 7.2e-76 288.1 214 59.8
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 7.2e-76 288.1 223 60.1
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 1.2e-75 287.3 229 56.3
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 1.8e-74 283.5 210 60.0
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 2.3e-74 283.1 201 62.2
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 3.9e-74 282.3 230 57.0
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 5.2e-74 282.0 254 52.0
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 4.4e-73 278.9 227 53.7
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 4.4e-73 278.9 190 62.6
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 1.7e-72 276.9 225 56.4
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 8.2e-72 274.6 229 55.5
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 1.4e-71 273.9 206 60.7
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.8e-71 273.5 231 56.7
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.8e-71 273.5 181 63.0
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 5.3e-71 271.9 235 54.5
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 7.0e-71 271.6 215 56.3
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 9.1e-71 271.2 289 49.5
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 1.2e-70 270.8 235 54.0
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 1.2e-70 270.8 212 59.4
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 2.6e-70 269.6 241 54.8
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 2.6e-70 269.6 191 63.4
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 2.6e-70 269.6 209 58.4
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 3.5e-70 269.2 247 54.3
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 5.9e-70 268.5 235 53.6
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 7.7e-70 268.1 228 56.6
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 7.7e-70 268.1 224 57.1
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 7.7e-70 268.1 207 60.9
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 7.7e-70 268.1 227 56.4
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 1.0e-69 267.7 186 67.2
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.3e-69 267.3 202 59.4
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 1.7e-69 266.9 224 57.1
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.7e-69 266.9 193 61.7
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 2.2e-69 266.5 223 56.5
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 2.2e-69 266.5 223 56.5
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 2.2e-69 266.5 237 55.7
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 2.9e-69 266.2 241 54.4
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 3.8e-69 265.8 225 57.8
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.9e-68 263.5 240 53.3
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 2.5e-68 263.1 226 53.5
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 4.2e-68 262.3 217 55.3
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 4.2e-68 262.3 226 53.5
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 5.5e-68 261.9 195 62.1
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 2.7e-67 259.6 224 56.2
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 2.7e-67 259.6 193 60.6
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 2.7e-67 259.6 227 55.1
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 5.2e-66 255.4 208 58.7
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 6.8e-66 255.0 168 71.4
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 8.8e-66 254.6 232 53.0
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 1.2e-65 254.2 241 51.5
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 2.0e-65 253.4 193 61.1
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.4e-65 252.7 168 69.6
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 3.4e-65 252.7 168 69.6
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 7.5e-65 251.5 258 50.4
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 9.8e-65 251.1 222 54.5
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 9.8e-65 251.1 168 68.5
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 3.7e-64 249.2 193 58.5
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 2.7e-62 243.0 166 65.7
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 2.7e-62 243.0 166 65.7
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 2.7e-62 243.0 147 71.4
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 7.7e-62 241.5 242 51.7
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 1.1e-60 237.7 218 54.6
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 2.1e-59 233.4 173 62.4
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 2.7e-59 233.0 215 53.0
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 6.1e-59 231.9 198 56.1
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 8.0e-59 231.5 233 49.8
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 4.4e-57 225.7 159 61.0
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 4.4e-57 225.7 128 75.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 7.0e-55 218.4 142 67.6
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 2.1e-51 206.8 152 59.2
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 2.8e-51 206.5 167 56.3
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 1.4e-42 177.6 222 43.7
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 2.7e-38 163.3 122 59.0
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 4.0e-34 149.4 120 55.0
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 4.0e-34 149.4 100 65.0
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 5.2e-34 149.1 131 52.7
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 4.1e-31 139.4 84 63.1
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 1.9e-28 130.6 143 43.4
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 9.9e-17 91.7 164 34.8
EL10Ac4g10139 Beta vulgaris HOM05D006850 ORTHO05D008545 1.1e-07 61.6 102 36.3


User provided reference genes

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