Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2842 Utricularia gibba HOM05D003962 ORTHO05D004714 0.0e+00 1316.2 907 100.0
unitig_88.g27642 Utricularia gibba HOM05D003962 ORTHO05D004714 8.4e-126 455.7 745 53.7
MSTRG.25678 Avicennia marina HOM05D003962 ORTHO05D004714 1.1e-120 438.7 930 52.5
Migut.A00639 Erythranthe guttata HOM05D003962 ORTHO05D004714 2.9e-118 430.6 949 48.8
SalBow1G2835 Salvia bowleyana HOM05D003962 ORTHO05D004714 3.6e-108 397.1 982 49.9
SalBow1G4038 Salvia bowleyana HOM05D003962 ORTHO05D004714 3.6e-108 397.1 982 49.9
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 4.1e-104 383.6 959 48.4
Dinv38828 Davidia involucrata HOM05D003962 ORTHO05D004714 4.4e-90 337.0 955 42.5
MSTRG.13886 Avicennia marina HOM05D003962 ORTHO05D004714 2.2e-89 334.7 941 45.1
SGA_v2.0_scaffold305G47981 Striga asiatica HOM05D003962 ORTHO05D004714 1.9e-85 321.6 960 47.6
CSS0043367 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 2.8e-76 291.2 963 44.7
Lj2A167T45 Lonicera japonica HOM05D003962 ORTHO05D004714 1.4e-75 288.9 955 44.6
Oeu009961.1 Olea europaea HOM05D003962 ORTHO05D004714 4.9e-73 280.4 947 32.4
Oeu063516.1 Olea europaea HOM05D003962 ORTHO05D004714 8.6e-70 269.6 1004 42.6
Dinv37529 Davidia involucrata HOM05D003962 ORTHO05D004714 1.8e-67 261.9 458 42.1
Oeu058004.1 Olea europaea HOM05D003962 ORTHO05D004714 5.8e-66 256.9 958 43.9
Solyc08g082410.4 Solanum lycopersicum HOM05D003962 ORTHO05D004714 1.3e-62 245.7 993 42.4
Oeu054025.1 Olea europaea HOM05D003962 ORTHO05D004714 4.3e-61 240.7 967 30.6
DCAR_029893 Daucus carota HOM05D003962 ORTHO05D004714 4.7e-60 237.3 961 42.7
GSVIVG01019537001 Vitis vinifera HOM05D003962 ORTHO05D005685 3.4e-58 231.1 946 29.3
CSS0016674 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 5.4e-56 223.8 341 39.9
Cc08_g16110 Coffea canephora HOM05D003962 ORTHO05D004714 2.3e-54 218.4 970 41.0
Actinidia04199 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.2e-52 212.6 960 42.4
CAN.G1804.9 Capsicum annuum HOM05D003962 ORTHO05D004714 2.1e-52 211.8 1010 41.2
Nitab4.5_0007367g0070 Nicotiana tabacum HOM05D003962 ORTHO05D004714 2.1e-52 211.8 986 39.2
PGSC0003DMG400012278 Solanum tuberosum HOM05D003962 ORTHO05D004714 8.1e-52 209.9 987 41.5
Hma1.2p1_0359F.1_g135210 Hydrangea macrophylla HOM05D003962 ORTHO05D004714 1.4e-51 209.1 1027 40.6
Nitab4.5_0002944g0030 Nicotiana tabacum HOM05D003962 ORTHO05D004714 1.7e-49 202.2 979 40.6
Actinidia27315 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.9e-48 198.7 345 39.4
Peaxi162Scf00074g00821 Petunia axillaris HOM05D003962 ORTHO05D004714 5.4e-48 197.2 967 42.1
CSS0006905 Camellia sinensis var. sinensis HOM05D003962 ORTHO05D004714 2.7e-47 194.9 223 44.4
Actinidia22731 Actinidia chinensis HOM05D003962 ORTHO05D004714 1.7e-46 192.2 371 37.2
vmacro11467 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.1e-43 183.0 1006 39.1
Nn1g01866 Nelumbo nucifera HOM05D003962 ORTHO05D004714 2.4e-43 181.8 963 30.2
TAR374G0911 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.7e-41 175.6 957 27.8
TAR636G0021 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.9e-40 172.2 965 31.3
TAR629G3347 Trochodendron aralioides HOM05D003962 ORTHO05D004714 9.3e-40 169.9 374 36.6
Rhsim02G0244100 Rhododendron simsii HOM05D003962 ORTHO05D004714 6.0e-39 167.2 1074 38.4
Aqoxy7G00097 Aquilegia oxysepala HOM05D003962 ORTHO05D004714 3.0e-38 164.9 972 27.3
Thecc.03G196300 Theobroma cacao HOM05D003962 ORTHO05D004714 1.1e-37 162.9 409 33.5
Nn3g19007 Nelumbo nucifera HOM05D003962 ORTHO05D004714 1.1e-35 156.4 955 28.0
Atru.chr1.164 Acer truncatum HOM05D003962 ORTHO05D004714 2.4e-35 155.2 413 35.8
vmacro11361 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 6.9e-35 153.7 418 32.5
Gohir.A11G014500 Gossypium hirsutum HOM05D003962 ORTHO05D004714 1.3e-33 149.4 398 31.7
unitig_88.g27643 Utricularia gibba HOM05D003962 ORTHO05D004714 2.9e-33 148.3 136 63.2
Ciclev10004179m.g Citrus clementina HOM05D003962 ORTHO05D004714 8.4e-33 146.7 428 30.1
Eucgr.A01465 Eucalyptus grandis HOM05D003962 ORTHO05D004714 2.4e-32 145.2 403 32.8
Manes.14G006600 Manihot esculenta HOM05D003962 ORTHO05D004714 5.4e-32 144.1 417 30.5
TAR375G1139 Trochodendron aralioides HOM05D003962 ORTHO05D004714 5.4e-32 144.1 245 38.8
Cpa.g.sc3.71 Carica papaya HOM05D003962 ORTHO05D004714 1.6e-31 142.5 407 31.9
Gohir.D11G014700 Gossypium hirsutum HOM05D003962 ORTHO05D004714 3.5e-31 141.4 398 30.4
Gohir.A11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 7.9e-31 140.2 402 30.6
Rhsim02G0244200 Rhododendron simsii HOM05D003962 ORTHO05D004714 7.9e-31 140.2 1046 38.4
Sabra12G0018000 Salix brachista HOM05D003962 ORTHO05D004714 3.9e-30 137.9 412 29.9
HanXRQChr17g0534811 Helianthus annuus HOM05D003962 ORTHO05D004714 6.6e-30 137.1 935 32.5
Potri.012G013800 Populus trichocarpa HOM05D003962 ORTHO05D004714 1.1e-29 136.3 417 30.7
Duzib205G1416 Durio zibethinus HOM05D003962 ORTHO05D004714 1.5e-29 136.0 423 30.7
COL.COLO4_11264 Corchorus olitorius HOM05D003962 ORTHO05D004714 1.9e-29 135.6 435 31.0
Sabra15G0011900 Salix brachista HOM05D003962 ORTHO05D004714 4.3e-29 134.4 418 30.9
Potri.015G014800 Populus trichocarpa HOM05D003962 ORTHO05D004714 7.3e-29 133.7 415 29.9
Duzib068G0757 Durio zibethinus HOM05D003962 ORTHO05D004714 9.6e-29 133.3 408 29.4
TWI23G0430 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 9.6e-29 133.3 944 32.4
Lalb_Chr08g0240331 Lupinus albus HOM05D003962 ORTHO05D004714 3.6e-28 131.3 412 30.6
Phvul.009G053600 Phaseolus vulgaris HOM05D003962 ORTHO05D004714 6.2e-28 130.6 415 29.9
DCAR_006489 Daucus carota HOM05D003962 ORTHO05D004714 8.1e-28 130.2 456 30.7
MD07G1290200 Malus domestica HOM05D003962 ORTHO05D004714 8.1e-28 130.2 417 30.5
PSO384G0521 Papaver somniferum HOM05D003962 ORTHO05D004714 4.0e-27 127.9 451 30.4
TWI14G0330 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 5.3e-27 127.5 930 25.4
Lalb_Chr23g0271551 Lupinus albus HOM05D003962 ORTHO05D004714 6.9e-27 127.1 401 29.2
Prupe.2G311300 Prunus persica HOM05D003962 ORTHO05D004714 6.9e-27 127.1 161 39.1
Sed0017272 Sechium edule HOM05D003962 ORTHO05D004714 9.0e-27 126.7 384 28.6
PSO135G0074 Papaver somniferum HOM05D003962 ORTHO05D004714 1.5e-26 125.9 452 29.4
ECA246G1296 Erigeron canadensis HOM05D003962 ORTHO05D004714 4.5e-26 124.4 934 34.0
Glyma.04G236700 Glycine max HOM05D003962 ORTHO05D004714 3.8e-25 121.3 411 28.2
Gorai.007G015100 Gossypium raimondii HOM05D003962 ORTHO05D004714 4.9e-25 120.9 312 29.5
HPP92_024026 Vanilla planifolia HOM05D003962 ORTHO05D004714 8.4e-25 120.2 139 43.2
AUR62006109 Chenopodium quinoa HOM05D003962 ORTHO05D004714 1.1e-24 119.8 392 29.3
SHI02385 Sapria himalayana HOM05D003962 ORTHO05D004714 1.1e-24 119.8 153 37.9
Ca_16697_v3 Cicer arietinum L. HOM05D003962 ORTHO05D004714 1.4e-24 119.4 420 27.9
MBI07_g07101_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 1.9e-24 119.0 434 28.1
Aa31sc139G70 Aethionema arabicum HOM05D003962 ORTHO05D004714 9.3e-24 116.7 165 40.0
Lj1g0008504 Lotus japonicus HOM05D003962 ORTHO05D004714 1.6e-23 115.9 408 27.7
Glyma.06G127600 Glycine max HOM05D003962 ORTHO05D004714 3.5e-23 114.8 418 28.0
HanXRQChr06g0166431 Helianthus annuus HOM05D003962 ORTHO05D004714 6.0e-23 114.0 355 33.2
RcHm_v2.0_Chr1g0380961 Rosa chinensis HOM05D003962 ORTHO05D004714 7.9e-23 113.6 352 32.1
TPR.G17287 Trifolium pratense HOM05D003962 ORTHO05D004714 7.9e-23 113.6 390 28.5
PSO063G5170 Papaver somniferum HOM05D003962 ORTHO05D004714 1.0e-22 113.2 977 26.1
C03p17680 Brassica napus HOM05D003962 ORTHO05D004714 1.3e-22 112.8 164 38.4
BolC3t14179H Brassica oleracea HOM05D003962 ORTHO05D004714 1.3e-22 112.8 164 38.4
PSO170G0250 Papaver somniferum HOM05D003962 ORTHO05D004714 1.3e-22 112.8 976 25.6
Zm00001eb359440 Zea mays HOM05D003962 ORTHO05D004714 1.3e-22 112.8 473 28.8
arahy.Tifrunner.gnm1.ann1.JYM9I0 Arachis hypogaea HOM05D003962 ORTHO05D004714 2.3e-22 112.1 398 35.7
BcaC01g06252 Brassica carinata HOM05D003962 ORTHO05D004714 3.0e-22 111.7 164 37.8
A03p15150 Brassica napus HOM05D003962 ORTHO05D004714 3.0e-22 111.7 164 37.8
BraA03t10810Z Brassica rapa HOM05D003962 ORTHO05D004714 3.0e-22 111.7 164 37.8
FvH4_7g31740 Fragaria vesca HOM05D003962 ORTHO05D004714 3.9e-22 111.3 407 30.7
FAN06G4230 Fragaria x ananassa HOM05D003962 ORTHO05D004714 3.9e-22 111.3 407 30.7
FAN06G4429 Fragaria x ananassa HOM05D003962 ORTHO05D004714 3.9e-22 111.3 407 30.7
Medtr3g091280 Medicago truncatula HOM05D003962 ORTHO05D004714 8.7e-22 110.2 410 27.8
Os01g0655400 Oryza sativa ssp. japonica HOM05D003962 ORTHO05D004714 1.9e-21 109.0 470 27.4
arahy.Tifrunner.gnm1.ann1.897SEY Arachis hypogaea HOM05D003962 ORTHO05D004714 2.5e-21 108.6 398 35.7
MBI06_g08468_MAGBIO Magnolia biondii HOM05D003962 ORTHO05D004714 2.5e-21 108.6 936 33.5
Sed0023111 Sechium edule HOM05D003962 ORTHO05D004714 2.5e-21 108.6 407 27.3
vmacro11466 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 1.6e-20 105.9 353 36.0
FAN10G3613 Fragaria x ananassa HOM05D003962 ORTHO05D004714 2.1e-20 105.5 405 30.4
FAN01G0781 Fragaria x ananassa HOM05D003962 ORTHO05D004714 3.7e-20 104.8 405 30.1
BcaNung06205 Brassica carinata HOM05D003962 ORTHO05D004714 4.8e-20 104.4 164 37.2
FAN03G1461 Fragaria x ananassa HOM05D003962 ORTHO05D004714 4.8e-20 104.4 405 30.1
VMungo1309G1284 Vigna mungo HOM05D003962 ORTHO05D004714 4.8e-20 104.4 967 29.5
FAN10G2253 Fragaria x ananassa HOM05D003962 ORTHO05D004714 1.1e-19 103.2 405 30.1
Lalb_Chr11g0066791 Lupinus albus HOM05D003962 ORTHO05D004714 2.4e-19 102.1 399 28.6
TWI39G0414 Tripterygium wilfordii HOM05D003962 ORTHO05D004714 3.1e-19 101.7 940 27.3
Lsat_1_v5_gn_3_10880 Lactuca sativa HOM05D003962 ORTHO05D004714 4.0e-19 101.3 945 32.2
Ah.13g070110 Amaranthus hybridus HOM05D003962 ORTHO05D004714 7.6e-18 97.1 939 31.6
Duzib084G0525 Durio zibethinus HOM05D003962 ORTHO05D004714 1.0e-17 96.7 942 27.6
Gorai.007G015000 Gossypium raimondii HOM05D003962 ORTHO05D004714 1.0e-17 96.7 934 32.5
vmacro11360 Vaccinium macrocarpon HOM05D003962 ORTHO05D004714 3.8e-17 94.7 395 32.4
Gohir.D11G014600 Gossypium hirsutum HOM05D003962 ORTHO05D004714 8.4e-17 93.6 933 33.1
Zm00001eb158050 Zea mays HOM05D003962 ORTHO05D004714 4.2e-16 91.3 382 29.3
Duzib205G1946 Durio zibethinus HOM05D003962 ORTHO05D004714 5.5e-16 90.9 946 30.1
CARHR266560 Cardamine hirsuta HOM05D003962 ORTHO05D004714 1.6e-15 89.4 367 25.6
Cfa016250 Carpinus fangiana HOM05D003962 ORTHO05D004714 2.1e-15 89.0 942 32.3
CDE10G0926 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 2.1e-15 89.0 139 36.0
TAR375G1118 Trochodendron aralioides HOM05D003962 ORTHO05D004714 4.6e-15 87.8 309 35.9
Carub.0008s1360 Capsella rubella HOM05D003962 ORTHO05D004714 6.0e-15 87.4 382 25.9
Thhalv10012484m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 1.3e-14 86.3 381 27.3
THA.LOC104825141 Tarenaya hassleriana HOM05D003962 ORTHO05D004714 1.1e-13 83.2 390 27.9
TAR629G3239 Trochodendron aralioides HOM05D003962 ORTHO05D004714 1.5e-13 82.8 247 40.9
EL10Ac3g05299 Beta vulgaris HOM05D003962 ORTHO05D004714 1.9e-13 82.4 925 30.1
GSVIVG01038709001 Vitis vinifera HOM05D003962 ORTHO05D004714 2.5e-13 82.0 936 33.3
Haze_00190 Corylus avellana HOM05D003962 ORTHO05D004714 3.3e-13 81.6 486 25.3
CDE02G1812 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 9.6e-13 80.1 150 32.0
Nitab4.5_0001210g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 4.1e-11 74.7 930 38.1
Nitab4.5_0006775g0080 Nicotiana tabacum HOM05D003962 ORTHO05D004714 5.3e-11 74.3 941 37.2
Thhalv10026934m.g Eutrema salsugineum HOM05D003962 ORTHO05D004714 1.2e-10 73.2 129 34.9
ClCG01G000470 Citrullus lanatus HOM05D003962 ORTHO05D004714 2.9e-09 68.6 956 26.5
CDE09G1087 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 1.9e-08 65.9 484 26.0
AUR62019379 Chenopodium quinoa HOM05D003962 ORTHO05D004714 9.3e-08 63.5 941 26.0
CDE10G1062 Ceratophyllum demersum HOM05D003962 ORTHO05D004714 1.2e-07 63.2 451 24.2
CANSAT21G2091 Cannabis sativa HOM05D003962 ORTHO05D004714 3.5e-07 61.6 933 34.7
Manes.06G159800 Manihot esculenta HOM05D003962 ORTHO05D004714 3.5e-07 61.6 945 28.8
CsaV3_5G000540 Cucumis sativus L. HOM05D003962 ORTHO05D004714 1.3e-06 59.7 923 22.1
QL09p009481 Quercus lobata HOM05D003962 ORTHO05D004714 3.9e-06 58.2 949 32.1


User provided reference genes

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