Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2821 Utricularia gibba HOM05D005642 ORTHO05D006672 3.7e-211 738.0 394 100.0
unitig_747.g21903 Utricularia gibba HOM05D005642 ORTHO05D006672 4.0e-96 355.9 327 63.3
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 3.0e-43 180.3 331 39.0
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 7.8e-36 155.6 341 37.5
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 7.8e-36 155.6 357 38.4
Migut.E01422 Erythranthe guttata HOM05D005642 ORTHO05D006672 9.9e-31 138.7 222 42.3
Oeu019279.2 Olea europaea HOM05D005642 ORTHO05D006672 1.5e-26 124.8 356 33.7
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 2.7e-20 104.0 350 32.6
GSVIVG01035528001 Vitis vinifera HOM05D005642 ORTHO05D006672 1.8e-16 91.3 281 33.8
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 2.4e-16 90.9 348 31.6
Hma1.2p1_0379F.1_g139825 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 2.4e-16 90.9 348 31.6
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 5.3e-16 89.7 304 35.2
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 1.5e-15 88.2 357 29.7
Potri.006G275200 Populus trichocarpa HOM05D005642 ORTHO05D006672 2.0e-15 87.8 122 45.9
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 2.0e-15 87.8 99 53.5
Nitab4.5_0000555g0260 Nicotiana tabacum HOM05D005642 ORTHO05D006672 1.3e-14 85.1 332 31.9
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 1.7e-14 84.7 373 32.7
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 2.9e-14 84.0 188 33.0
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 3.8e-14 83.6 382 27.7
Solyc08g006480.3 Solanum lycopersicum HOM05D005642 ORTHO05D006672 3.8e-14 83.6 327 29.4
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 4.9e-14 83.2 211 32.7
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 6.5e-14 82.8 189 36.5
MD08G1130500 Malus domestica HOM05D005642 ORTHO05D006672 6.5e-14 82.8 104 47.1
BolC3t21109H Brassica oleracea HOM05D005642 ORTHO05D006672 8.4e-14 82.4 105 46.7
Lj1g0005947 Lotus japonicus HOM05D005642 ORTHO05D006672 8.4e-14 82.4 167 37.1
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 8.4e-14 82.4 87 48.3
Atru.chr7.2633 Acer truncatum HOM05D005642 ORTHO05D006672 1.1e-13 82.0 119 45.4
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 1.4e-13 81.6 105 46.7
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 1.4e-13 81.6 105 46.7
ClCG05G017540 Citrullus lanatus HOM05D005642 ORTHO05D006672 1.4e-13 81.6 98 48.0
BcaB03g12695 Brassica carinata HOM05D005642 ORTHO05D006672 1.9e-13 81.3 102 46.1
A08p18620 Brassica napus HOM05D005642 ORTHO05D006672 2.5e-13 80.9 105 46.7
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 2.5e-13 80.9 156 38.5
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 3.2e-13 80.5 288 30.2
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 3.2e-13 80.5 100 47.0
DCAR_004570 Daucus carota HOM05D005642 ORTHO05D006672 4.2e-13 80.1 346 28.9
Sopen08g002430 Solanum pennellii HOM05D005642 ORTHO05D006672 4.2e-13 80.1 333 28.8
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 5.5e-13 79.7 180 33.3
Cc11_g04340 Coffea canephora HOM05D005642 ORTHO05D006672 7.1e-13 79.3 312 33.0
Lsat_1_v5_gn_3_25461 Lactuca sativa HOM05D005642 ORTHO05D006672 7.1e-13 79.3 92 48.9
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 9.3e-13 79.0 346 29.2
CsaV3_3G047060 Cucumis sativus L. HOM05D005642 ORTHO05D006672 1.2e-12 78.6 117 42.7
Glyma.04G074900 Glycine max HOM05D005642 ORTHO05D006672 1.6e-12 78.2 168 36.9
Psat5g024120 Pisum sativum HOM05D005642 ORTHO05D006672 1.6e-12 78.2 161 34.2
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 2.1e-12 77.8 105 45.7
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 2.7e-12 77.4 160 36.9
Gorai.001G001600 Gossypium raimondii HOM05D005642 ORTHO05D006672 3.5e-12 77.0 100 47.0
Gohir.A07G001500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 6.0e-12 76.3 166 36.7
Gohir.D07G001900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 6.0e-12 76.3 100 47.0
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 6.0e-12 76.3 157 38.9
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 1.0e-11 75.5 171 35.7
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 1.0e-11 75.5 337 30.3
vmacro00200 Vaccinium macrocarpon HOM05D005642 ORTHO05D006672 2.3e-11 74.3 341 31.1
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 3.0e-11 73.9 91 47.3
TAR383G0661 Trochodendron aralioides HOM05D005642 ORTHO05D006672 3.9e-11 73.6 99 42.4
Eucgr.C04006 Eucalyptus grandis HOM05D005642 ORTHO05D006672 5.1e-11 73.2 316 31.6
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 6.7e-11 72.8 99 43.4
FAN15G2732 Fragaria x ananassa HOM05D005642 ORTHO05D006672 6.7e-11 72.8 99 43.4
Haze_21725 Corylus avellana HOM05D005642 ORTHO05D006672 8.7e-11 72.4 181 34.8
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 8.7e-11 72.4 167 37.1
Duzib168G1720 Durio zibethinus HOM05D005642 ORTHO05D006672 1.1e-10 72.0 334 29.0
Sabra18G0014300 Salix brachista HOM05D005642 ORTHO05D006672 1.5e-10 71.6 177 36.7
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 1.5e-10 71.6 107 44.9
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 1.9e-10 71.2 91 45.1
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 2.5e-10 70.9 133 34.6
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 2.5e-10 70.9 91 45.1
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 2.5e-10 70.9 133 34.6
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 2.5e-10 70.9 91 45.1
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 2.5e-10 70.9 325 28.9
Medtr3g108780 Medicago truncatula HOM05D005642 ORTHO05D006672 2.5e-10 70.9 109 40.4
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 5.7e-10 69.7 370 28.1
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 5.7e-10 69.7 107 40.2
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 5.7e-10 69.7 82 46.3
Lalb_Chr11g0064111 Lupinus albus HOM05D005642 ORTHO05D006672 9.7e-10 68.9 110 39.1
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 9.7e-10 68.9 165 34.5
BcaNung04589 Brassica carinata HOM05D005642 ORTHO05D006672 1.6e-09 68.2 298 29.5
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 2.2e-09 67.8 120 37.5
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 2.2e-09 67.8 100 40.0
Cfa013263 Carpinus fangiana HOM05D005642 ORTHO05D006672 2.8e-09 67.4 365 26.8
COL.COLO4_19042 Corchorus olitorius HOM05D005642 ORTHO05D006672 3.7e-09 67.0 383 28.5
Gorai.009G068300 Gossypium raimondii HOM05D005642 ORTHO05D006672 3.7e-09 67.0 149 35.6
FAN20G1085 Fragaria x ananassa HOM05D005642 ORTHO05D006672 4.8e-09 66.6 179 35.2
Gohir.D05G067500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 4.8e-09 66.6 149 35.6
MBI14_g08146_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 1.1e-08 65.5 124 37.9
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 1.4e-08 65.1 308 26.6
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 1.4e-08 65.1 154 35.1
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 1.8e-08 64.7 230 32.6
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 3.1e-08 63.9 286 29.0
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 6.9e-08 62.8 234 29.9
Gohir.A05G064900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 6.9e-08 62.8 148 33.8
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 1.2e-07 62.0 181 34.8
SHI21128 Sapria himalayana HOM05D005642 ORTHO05D006672 1.2e-07 62.0 99 42.4
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 1.5e-07 61.6 144 35.4
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 1.5e-07 61.6 283 25.4
CARHR239310 Cardamine hirsuta HOM05D005642 ORTHO05D006672 2.6e-07 60.8 274 27.7
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 1.3e-06 58.5 246 28.5
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 2.2e-06 57.8 163 34.4
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 2.2e-06 57.8 272 29.0
Rhsim09G0061700 Rhododendron simsii HOM05D005642 ORTHO05D006672 2.9e-06 57.4 247 31.6
Lalb_Chr23g0269061 Lupinus albus HOM05D005642 ORTHO05D006672 3.8e-06 57.0 301 26.9
Sabra06G0213000 Salix brachista HOM05D005642 ORTHO05D006672 3.8e-06 57.0 354 25.4


User provided reference genes

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