Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2772 Utricularia gibba HOM05D004744 ORTHO05D005655 7.6e-267 923.3 480 100.0
MSTRG.11596 Avicennia marina HOM05D004744 ORTHO05D005655 2.1e-115 420.2 629 42.3
Migut.A00009 Erythranthe guttata HOM05D004744 ORTHO05D005655 6.3e-112 408.7 631 41.4
SGA_v2.0_scaffold64G21986 Striga asiatica HOM05D004744 ORTHO05D005655 2.1e-107 393.7 666 40.4
Oeu033353.1 Olea europaea HOM05D004744 ORTHO05D005655 3.1e-103 379.8 662 38.8
Solyc08g041780.3 Solanum lycopersicum HOM05D004744 ORTHO05D005655 5.3e-103 379.0 598 40.5
Sopen08g011940 Solanum pennellii HOM05D004744 ORTHO05D005655 7.2e-100 368.6 628 38.5
CSS0007985 Camellia sinensis var. sinensis HOM05D004744 ORTHO05D005655 6.1e-99 365.5 622 40.0
CAN.G326.4 Capsicum annuum HOM05D004744 ORTHO05D005655 3.7e-96 356.3 628 36.8
HanXRQChr01g0030631 Helianthus annuus HOM05D004744 ORTHO05D005655 1.4e-95 354.4 629 37.7
Actinidia13213 Actinidia chinensis HOM05D004744 ORTHO05D005655 2.4e-95 353.6 629 38.8
Atru.chr7.2497 Acer truncatum HOM05D004744 ORTHO05D005655 2.6e-94 350.1 632 38.3
Gorai.010G116900 Gossypium raimondii HOM05D004744 ORTHO05D005655 4.2e-92 342.8 631 37.4
Lsat_1_v5_gn_1_43821 Lactuca sativa HOM05D004744 ORTHO05D005655 1.2e-91 341.3 629 36.9
ECA248G1191 Erigeron canadensis HOM05D004744 ORTHO05D005655 2.1e-91 340.5 632 37.0
TAR625G1411 Trochodendron aralioides HOM05D004744 ORTHO05D005655 2.1e-91 340.5 628 37.9
CiPaw.08G008500 Carya illinoinensis HOM05D004744 ORTHO05D005655 8.0e-91 338.6 629 36.9
Gohir.D06G101900 Gossypium hirsutum HOM05D004744 ORTHO05D005655 1.8e-90 337.4 630 37.3
Rhsim02G0205700 Rhododendron simsii HOM05D004744 ORTHO05D005655 1.8e-90 337.4 631 37.9
Ciclev10007726m.g Citrus clementina HOM05D004744 ORTHO05D005655 6.7e-90 335.5 629 36.6
GSVIVG01035922001 Vitis vinifera HOM05D004744 ORTHO05D005655 2.0e-89 334.0 628 37.6
QL02p020429 Quercus lobata HOM05D004744 ORTHO05D005655 2.6e-89 333.6 631 36.1
Nitab4.5_0002992g0040 Nicotiana tabacum HOM05D004744 ORTHO05D005655 5.7e-89 332.4 628 37.1
Psat5g030800 Pisum sativum HOM05D004744 ORTHO05D005655 2.8e-88 330.1 630 35.7
vmacro11211 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 3.7e-88 329.7 397 50.6
vmacro11210 Vaccinium macrocarpon HOM05D004744 ORTHO05D005655 8.2e-88 328.6 397 50.4
Thecc.09G019800 Theobroma cacao HOM05D004744 ORTHO05D005655 1.8e-87 327.4 629 36.2
Hund06750 Selenicereus undatus HOM05D004744 ORTHO05D005655 7.0e-87 325.5 588 37.2
Aqoxy7G03541 Aquilegia oxysepala HOM05D004744 ORTHO05D005655 1.2e-86 324.7 628 36.3
MD15G1130500 Malus domestica HOM05D004744 ORTHO05D005655 1.0e-85 321.6 630 35.4
PGR142G3966 Punica granatum HOM05D004744 ORTHO05D005655 1.0e-85 321.6 632 35.6
BcaNung03134 Brassica carinata HOM05D004744 ORTHO05D005655 2.9e-85 320.1 623 36.1
THA.LOC104805576 Tarenaya hassleriana HOM05D004744 ORTHO05D005655 5.0e-85 319.3 629 35.5
Ca_15759_v3 Cicer arietinum L. HOM05D004744 ORTHO05D005655 1.5e-84 317.8 630 34.9
Lj1g0018058 Lotus japonicus HOM05D004744 ORTHO05D005655 1.9e-84 317.4 630 34.6
FAN24G2392 Fragaria x ananassa HOM05D004744 ORTHO05D005655 4.2e-84 316.2 629 32.9
BcaC09g51994 Brassica carinata HOM05D004744 ORTHO05D005655 7.2e-84 315.5 625 36.5
BolC1t00685H Brassica oleracea HOM05D004744 ORTHO05D005655 7.2e-84 315.5 625 36.5
FAN20G1207 Fragaria x ananassa HOM05D004744 ORTHO05D005655 7.2e-84 315.5 633 32.7
C01p06880 Brassica napus HOM05D004744 ORTHO05D005655 9.4e-84 315.1 625 36.5
AUR62012029 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.6e-83 314.3 591 35.4
AUR62015365 Chenopodium quinoa HOM05D004744 ORTHO05D005655 1.6e-83 314.3 392 44.6
CDE05G1537 Ceratophyllum demersum HOM05D004744 ORTHO05D005655 2.1e-83 313.9 626 35.0
Cc08_g00230 Coffea canephora HOM05D004744 ORTHO05D005655 2.1e-83 313.9 635 34.5
FvH4_2g28330 Fragaria vesca HOM05D004744 ORTHO05D005655 3.6e-83 313.2 629 32.8
Glyma.02G173300 Glycine max HOM05D004744 ORTHO05D005655 4.7e-83 312.8 632 35.8
TPR.G3127 Trifolium pratense HOM05D004744 ORTHO05D005655 4.7e-83 312.8 669 33.2
Potri.018G022800 Populus trichocarpa HOM05D004744 ORTHO05D005655 1.8e-82 310.8 629 34.5
Carub.0007s0850 Capsella rubella HOM05D004744 ORTHO05D005655 3.0e-82 310.1 623 36.4
CARHR239950 Cardamine hirsuta HOM05D004744 ORTHO05D005655 3.0e-82 310.1 625 36.2
Medtr3g106410 Medicago truncatula HOM05D004744 ORTHO05D005655 3.0e-82 310.1 629 34.8
AL7G19840 Arabidopsis lyrata HOM05D004744 ORTHO05D005655 4.0e-82 309.7 623 36.9
Glyma.02G001200 Glycine max HOM05D004744 ORTHO05D005655 4.0e-82 309.7 631 35.0
Sabra18G0025200 Salix brachista HOM05D004744 ORTHO05D005655 4.0e-82 309.7 629 34.2
arahy.Tifrunner.gnm1.ann1.8I84Z2 Arachis hypogaea HOM05D004744 ORTHO05D005655 5.2e-82 309.3 630 35.6
Lalb_Chr08g0244261 Lupinus albus HOM05D004744 ORTHO05D005655 6.8e-82 308.9 629 34.0
arahy.Tifrunner.gnm1.ann1.LGG0U4 Arachis hypogaea HOM05D004744 ORTHO05D005655 1.5e-81 307.8 628 35.5
FAN27G1080 Fragaria x ananassa HOM05D004744 ORTHO05D005655 2.0e-81 307.4 629 33.1
A01p06240 Brassica napus HOM05D004744 ORTHO05D005655 2.6e-81 307.0 623 35.3
Sp7g29850 Schrenkiella parvula HOM05D004744 ORTHO05D005655 4.4e-81 306.2 621 36.2
Haze_21464 Corylus avellana HOM05D004744 ORTHO05D005655 7.5e-81 305.4 655 34.4
Aa31LG2G18030 Aethionema arabicum HOM05D004744 ORTHO05D005655 2.2e-80 303.9 618 35.4
EL10Ac3g06914 Beta vulgaris HOM05D004744 ORTHO05D005655 2.8e-80 303.5 626 34.5
BraA01t00591Z Brassica rapa HOM05D004744 ORTHO05D005655 6.3e-80 302.4 623 35.6
Thhalv10024640m.g Eutrema salsugineum HOM05D004744 ORTHO05D005655 6.3e-80 302.4 637 35.8
COL.COLO4_18910 Corchorus olitorius HOM05D004744 ORTHO05D005655 1.1e-79 301.6 397 45.6
Lj8C731T12 Lonicera japonica HOM05D004744 ORTHO05D005655 1.4e-79 301.2 571 37.5
VMungo0720G0351 Vigna mungo HOM05D004744 ORTHO05D005655 3.1e-79 300.1 631 33.4
CsaV3_4G036900 Cucumis sativus L. HOM05D004744 ORTHO05D005655 4.1e-79 299.7 626 33.7
PSO063G6514 Papaver somniferum HOM05D004744 ORTHO05D005655 5.4e-79 299.3 630 33.8
AT4G32050 Arabidopsis thaliana HOM05D004744 ORTHO05D005655 1.6e-78 297.7 622 35.4
ClCG05G016620 Citrullus lanatus HOM05D004744 ORTHO05D005655 1.6e-78 297.7 625 33.9
MELO3C016990.2 Cucumis melo HOM05D004744 ORTHO05D005655 1.6e-78 297.7 626 33.5
CANSAT01G0649 Cannabis sativa HOM05D004744 ORTHO05D005655 2.7e-78 297.0 629 33.4
RcHm_v2.0_Chr6g0297241 Rosa chinensis HOM05D004744 ORTHO05D005655 1.3e-77 294.7 630 33.0
Sed0024238 Sechium edule HOM05D004744 ORTHO05D005655 5.0e-77 292.7 628 32.5
Phvul.007G279700 Phaseolus vulgaris HOM05D004744 ORTHO05D005655 5.5e-76 289.3 647 32.9
TWI32G0623 Tripterygium wilfordii HOM05D004744 ORTHO05D005655 7.2e-76 288.9 586 35.7
Peaxi162Scf00116g00091 Petunia axillaris HOM05D004744 ORTHO05D005655 2.1e-75 287.3 358 46.6
Cfa013106 Carpinus fangiana HOM05D004744 ORTHO05D005655 1.0e-74 285.0 560 35.2
CAN.G435.2 Capsicum annuum HOM05D004744 ORTHO05D005655 7.5e-73 278.9 396 43.7
Cpa.g.sc187.24 Carica papaya HOM05D004744 ORTHO05D005655 2.2e-72 277.3 386 43.8
Prupe.1G485900 Prunus persica HOM05D004744 ORTHO05D005655 9.2e-71 271.9 540 35.4
Os02g0798700 Oryza sativa ssp. japonica HOM05D004744 ORTHO05D005655 2.9e-69 266.9 625 29.9
Manes.03G012200 Manihot esculenta HOM05D004744 ORTHO05D005655 4.3e-68 263.1 574 33.1
Dinv18156 Davidia involucrata HOM05D004744 ORTHO05D005655 5.2e-66 256.1 525 35.6
HPP92_003269 Vanilla planifolia HOM05D004744 ORTHO05D005655 9.8e-65 251.9 627 31.1
ATR0767G197 Amborella trichopoda HOM05D004744 ORTHO05D005655 1.3e-64 251.5 630 30.3
Sc20g0001320 Simmondsia chinensis HOM05D004744 ORTHO05D005655 1.3e-64 251.5 513 35.7
TPR.G21279 Trifolium pratense HOM05D004744 ORTHO05D005655 4.9e-64 249.6 596 32.0
BcaC06g30946 Brassica carinata HOM05D004744 ORTHO05D005655 5.9e-62 242.7 621 31.6
DCAR_000582 Daucus carota HOM05D004744 ORTHO05D005655 5.6e-60 236.1 627 32.1
Nitab4.5_0005958g0020 Nicotiana tabacum HOM05D004744 ORTHO05D005655 7.3e-60 235.7 551 32.8
Eucgr.C01702 Eucalyptus grandis HOM05D004744 ORTHO05D005655 2.1e-59 234.2 535 32.9
TPR.G21273 Trifolium pratense HOM05D004744 ORTHO05D005655 1.0e-53 215.3 558 31.0
TPR.G18367 Trifolium pratense HOM05D004744 ORTHO05D005655 1.3e-53 214.9 382 38.5
Lj1g0024423 Lotus japonicus HOM05D004744 ORTHO05D005655 6.6e-53 212.6 618 30.3
Nn8g39704 Nelumbo nucifera HOM05D004744 ORTHO05D005655 4.7e-51 206.5 473 32.6
RcHm_v2.0_Chr2g0139901 Rosa chinensis HOM05D004744 ORTHO05D005655 4.7e-51 206.5 405 36.0
Gohir.A06G099700 Gossypium hirsutum HOM05D004744 ORTHO05D005655 3.7e-48 196.8 469 33.0
Eucgr.C01625 Eucalyptus grandis HOM05D004744 ORTHO05D005655 1.5e-44 184.9 394 34.8
Mapoly0033s0067 Marchantia polymorpha HOM05D004744 ORTHO05D005655 4.9e-40 169.9 412 31.3
Pp3c12_9830 Physcomitrium patens HOM05D004744 ORTHO05D005655 1.1e-36 158.7 400 28.8
SMO134G0198 Selaginella moellendorffii HOM05D004744 ORTHO05D005655 7.3e-36 156.0 399 29.3
Zm00001eb257970 Zea mays HOM05D004744 ORTHO05D005655 1.1e-34 152.1 401 30.4
AagrBONN_evm.TU.Sc2ySwM_117.465 Anthoceros agrestis HOM05D004744 ORTHO05D005655 6.4e-32 142.9 401 28.4
C07p37210 Brassica napus HOM05D004744 ORTHO05D005655 1.6e-30 138.3 433 28.9
BolC7t44231H Brassica oleracea HOM05D004744 ORTHO05D005655 1.6e-30 138.3 433 28.9
Ah.14g079380 Amaranthus hybridus HOM05D004744 ORTHO05D005655 1.0e-29 135.6 192 38.5
CBR_g34813 Chara braunii HOM05D004744 ORTHO05D005655 3.3e-28 130.6 384 27.3
GSVIVG01011258001 Vitis vinifera HOM05D004744 ORTHO05D005655 5.4e-23 113.2 128 51.6
Ah.14g079390 Amaranthus hybridus HOM05D004744 ORTHO05D005655 7.1e-23 112.8 177 38.4
SEGI_40333 Sequoiadendron giganteum HOM05D004744 ORTHO05D005655 1.9e-20 104.8 128 46.1
Peaxi162Scf00116g00915 Petunia axillaris HOM05D004744 ORTHO05D005655 2.1e-19 101.3 241 33.6
PGSC0003DMG400015627 Solanum tuberosum HOM05D004744 ORTHO05D005655 6.2e-19 99.8 125 44.8
FAN09G4690 Fragaria x ananassa HOM05D004744 ORTHO05D005655 1.4e-18 98.6 335 30.1
DCAR_000575 Daucus carota HOM05D004744 ORTHO05D005655 4.0e-18 97.1 104 54.8
FAN14G1088 Fragaria x ananassa HOM05D004744 ORTHO05D005655 8.4e-16 89.4 361 26.0
BcaC06g33762 Brassica carinata HOM05D004744 ORTHO05D005655 1.4e-15 88.6 159 37.1
C08p49950 Brassica napus HOM05D004744 ORTHO05D005655 1.6e-14 85.1 142 41.5
FvH4_6g32120 Fragaria vesca HOM05D004744 ORTHO05D005655 3.5e-14 84.0 192 34.4
BolC8t47068H Brassica oleracea HOM05D004744 ORTHO05D005655 4.6e-14 83.6 127 44.1
BraA06t26993Z Brassica rapa HOM05D004744 ORTHO05D005655 1.0e-13 82.4 266 31.2
A06p40720 Brassica napus HOM05D004744 ORTHO05D005655 8.7e-13 79.3 266 30.8
BcaC06g30944 Brassica carinata HOM05D004744 ORTHO05D005655 2.8e-11 74.3 122 37.7
DCAR_000578 Daucus carota HOM05D004744 ORTHO05D005655 8.1e-11 72.8 102 46.1
DCAR_000580 Daucus carota HOM05D004744 ORTHO05D005655 8.1e-11 72.8 102 45.1
SHI18507 Sapria himalayana HOM05D004744 ORTHO05D005655 1.8e-10 71.6 88 40.9
BcaC07g41939 Brassica carinata HOM05D004744 ORTHO05D005655 1.2e-09 68.9 105 41.9
Cpa.g.sc187.23 Carica papaya HOM05D004744 ORTHO05D005655 2.6e-09 67.8 90 36.7
COL.COLO4_18909 Corchorus olitorius HOM05D004744 ORTHO05D005655 4.9e-08 63.5 82 42.7
SHI18506 Sapria himalayana HOM05D004744 ORTHO05D005655 4.9e-08 63.5 56 57.1
unitig_60.g25872 Utricularia gibba HOM05D004744 ORTHO05D005655 8.4e-08 62.8 39 84.6
unitig_748.g7861 Utricularia gibba HOM05D004744 ORTHO05D005655 1.4e-07 62.0 35 94.3
vmacro12150 Vaccinium macrocarpon HOM05D000172 ORTHO05D000781 1.9e-07 61.6 348 25.0
Eucgr.L02780 Eucalyptus grandis HOM05D004744 ORTHO05D005655 2.5e-07 61.2 55 54.5


User provided reference genes

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