Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g277 Utricularia gibba HOM05D001935 ORTHO05D010109 9.1e-84 313.5 159 100.0
SalBow3G1122 Salvia bowleyana HOM05D001935 ORTHO05D010109 5.6e-25 118.2 157 44.6
Haze_05029 Corylus avellana HOM05D001935 ORTHO05D010109 1.9e-17 93.2 162 38.9
Cfa005813 Carpinus fangiana HOM05D001935 ORTHO05D010109 3.3e-17 92.4 163 36.8
Hma1.2p1_0486F.1_g163095 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 7.3e-17 91.3 159 37.1
Hma1.2p1_0486F.1_g163120 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 7.3e-17 91.3 159 37.1
Atru.chr5.1021 Acer truncatum HOM05D001935 ORTHO05D010109 9.6e-17 90.9 172 36.6
QL12p020164 Quercus lobata HOM05D001935 ORTHO05D010109 9.6e-17 90.9 160 39.4
Cpa.g.sc18.27 Carica papaya HOM05D001935 ORTHO05D010109 1.3e-16 90.5 165 37.6
Atru.chr5.1024 Acer truncatum HOM05D001935 ORTHO05D010109 1.6e-16 90.1 172 36.0
Oeu038015.2 Olea europaea HOM05D001935 ORTHO05D010109 1.6e-16 90.1 158 40.5
Duzib138G0891 Durio zibethinus HOM05D001935 ORTHO05D010109 3.6e-16 89.0 165 37.0
Gohir.A07G128000 Gossypium hirsutum HOM05D001935 ORTHO05D010109 1.1e-15 87.4 156 37.2
SGA_v2.0_scaffold376G50276 Striga asiatica HOM05D001935 ORTHO05D010109 1.4e-15 87.0 156 38.5
COL.COLO4_23245 Corchorus olitorius HOM05D001935 ORTHO05D010109 1.8e-15 86.7 164 39.0
Thecc.01G311900 Theobroma cacao HOM05D001935 ORTHO05D010109 3.1e-15 85.9 162 35.8
Gohir.D11G115100 Gossypium hirsutum HOM05D001935 ORTHO05D010109 4.0e-15 85.5 158 34.8
Gorai.008G140400 Gossypium raimondii HOM05D001935 ORTHO05D010109 5.3e-15 85.1 157 35.7
Rhsim13G0005300 Rhododendron simsii HOM05D001935 ORTHO05D010109 9.0e-15 84.3 146 38.4
Gorai.007G123300 Gossypium raimondii HOM05D001935 ORTHO05D010109 1.2e-14 84.0 158 34.2
CiPaw.07G116400 Carya illinoinensis HOM05D001935 ORTHO05D010109 2.0e-14 83.2 161 34.8
Gohir.D07G132400 Gossypium hirsutum HOM05D001935 ORTHO05D010109 2.6e-14 82.8 156 36.5
Gorai.001G143800 Gossypium raimondii HOM05D001935 ORTHO05D010109 3.4e-14 82.4 156 36.5
CSS0036092 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 4.4e-14 82.0 163 37.4
Gohir.A12G125800 Gossypium hirsutum HOM05D001935 ORTHO05D010109 4.4e-14 82.0 157 34.4
Gohir.D12G129300 Gossypium hirsutum HOM05D001935 ORTHO05D010109 5.8e-14 81.6 157 34.4
CSS0010042 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 7.6e-14 81.3 165 35.8
CSS0012652 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 7.6e-14 81.3 165 35.8
Manes.01G226900 Manihot esculenta HOM05D001935 ORTHO05D010109 9.9e-14 80.9 158 36.1
Sabra16G0129700 Salix brachista HOM05D001935 ORTHO05D010109 9.9e-14 80.9 171 32.2
TAR633G2657 Trochodendron aralioides HOM05D001935 ORTHO05D010109 1.3e-13 80.5 131 38.9
Actinidia21004 Actinidia chinensis HOM05D001136 ORTHO05D001144 2.2e-13 79.7 127 37.0
Dinv10085 Davidia involucrata HOM05D001935 ORTHO05D010109 2.2e-13 79.7 125 41.6
EL10As5g23517 Beta vulgaris HOM05D001935 ORTHO05D010109 3.8e-13 79.0 166 35.5
AUR62011822 Chenopodium quinoa HOM05D001935 ORTHO05D010109 4.9e-13 78.6 134 34.3
MELO3C015930.2 Cucumis melo HOM05D001935 ORTHO05D010109 4.9e-13 78.6 154 35.1
Dinv10084 Davidia involucrata HOM05D001935 ORTHO05D010109 4.9e-13 78.6 118 39.8
CiPaw.08G090700 Carya illinoinensis HOM05D001935 ORTHO05D010109 1.4e-12 77.0 163 35.6
Potri.016G128800 Populus trichocarpa HOM05D001935 ORTHO05D010109 1.9e-12 76.6 174 33.3
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 3.2e-12 75.9 118 36.4
AUR62024666 Chenopodium quinoa HOM05D001935 ORTHO05D010109 4.2e-12 75.5 138 33.3
Ciclev10022487m.g Citrus clementina HOM05D001935 ORTHO05D010109 4.2e-12 75.5 115 43.5
Rhsim13G0005200 Rhododendron simsii HOM05D001935 ORTHO05D010109 7.1e-12 74.7 144 35.4
TAR362G0690 Trochodendron aralioides HOM05D001136 ORTHO05D010109 7.1e-12 74.7 130 35.4
Ah.11g049310 Amaranthus hybridus HOM05D001935 ORTHO05D010109 9.3e-12 74.3 167 34.7
Zm00001eb340260 Zea mays HOM05D001935 ORTHO05D010109 9.3e-12 74.3 158 32.3
Os01g0304400 Oryza sativa ssp. japonica HOM05D001935 ORTHO05D010109 2.1e-11 73.2 132 36.4
Sed0028026 Sechium edule HOM05D001935 ORTHO05D010109 2.1e-11 73.2 150 32.0
Potri.006G105500 Populus trichocarpa HOM05D001935 ORTHO05D010109 2.7e-11 72.8 169 32.0
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 7.9e-11 71.2 105 38.1
Potri.006G105600 Populus trichocarpa HOM05D001935 ORTHO05D010109 7.9e-11 71.2 168 31.0
GSVIVG01028106001 Vitis vinifera HOM05D001935 ORTHO05D010109 1.7e-10 70.1 120 39.2
Ah.02g112210 Amaranthus hybridus HOM05D001935 ORTHO05D010109 3.0e-10 69.3 164 31.7
Sabra06G0082000 Salix brachista HOM05D001935 ORTHO05D010109 8.7e-10 67.8 165 33.3
ClCG09G005160 Citrullus lanatus HOM05D001935 ORTHO05D010109 1.1e-09 67.4 111 39.6
Sed0011579 Sechium edule HOM05D001935 ORTHO05D010109 1.5e-09 67.0 156 31.4
TWI36G1013 Tripterygium wilfordii HOM05D001935 ORTHO05D010109 1.5e-09 67.0 128 33.6
Psat3g020520 Pisum sativum HOM05D001935 ORTHO05D010109 4.3e-09 65.5 148 33.1
EL10As5g23516 Beta vulgaris HOM05D001935 ORTHO05D010109 5.6e-09 65.1 170 31.2
Glyma.03G218900 Glycine max HOM05D001935 ORTHO05D010109 7.3e-09 64.7 147 32.0
MBI16_g21181_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 7.3e-09 64.7 178 29.8
Peaxi162Scf00119g00143 Petunia axillaris HOM05D001935 ORTHO05D001700 9.6e-09 64.3 170 31.2
Medtr7g109420 Medicago truncatula HOM05D001935 ORTHO05D010109 1.3e-08 63.9 154 28.6
Aqoxy2G01830 Aquilegia oxysepala HOM05D001935 ORTHO05D010109 1.6e-08 63.5 161 31.1
Gohir.D05G318900 Gossypium hirsutum HOM05D001935 ORTHO05D001700 2.8e-08 62.8 164 30.5
Gorai.009G341800 Gossypium raimondii HOM05D001935 ORTHO05D001700 2.8e-08 62.8 164 30.5
TPR.G4060 Trifolium pratense HOM05D001935 ORTHO05D010109 3.6e-08 62.4 152 32.9
ATR0706G209 Amborella trichopoda HOM05D001935 ORTHO05D010109 6.2e-08 61.6 163 32.5
Nn3g18024 Nelumbo nucifera HOM05D001935 ORTHO05D001700 6.2e-08 61.6 122 34.4
SEGI_39105 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 6.2e-08 61.6 189 31.2
TAR622G0514 Trochodendron aralioides HOM05D001935 ORTHO05D001700 6.2e-08 61.6 127 33.9
Lj1g0023097 Lotus japonicus HOM05D001935 ORTHO05D010109 8.1e-08 61.2 132 32.6
Ca_09205_v3 Cicer arietinum L. HOM05D001935 ORTHO05D010109 1.1e-07 60.8 142 33.1
Gohir.A05G317100 Gossypium hirsutum HOM05D001935 ORTHO05D001700 1.1e-07 60.8 164 30.5
Phvul.001G212300 Phaseolus vulgaris HOM05D001935 ORTHO05D010109 1.4e-07 60.5 170 28.2
EL10Ac2g04515 Beta vulgaris HOM05D001935 ORTHO05D001700 1.8e-07 60.1 161 30.4
TPR.G25253 Trifolium pratense HOM05D001935 ORTHO05D001700 1.8e-07 60.1 135 31.9
MSTRG.2193 Avicennia marina HOM05D001935 ORTHO05D001700 2.4e-07 59.7 164 29.3
Nn1g02733 Nelumbo nucifera HOM05D001935 ORTHO05D001700 2.4e-07 59.7 129 32.6
MSTRG.15313 Avicennia marina HOM05D001935 ORTHO05D001700 3.1e-07 59.3 174 30.5
Dinv16185 Davidia involucrata HOM05D001935 ORTHO05D001700 3.1e-07 59.3 116 34.5
Thecc.02G277900 Theobroma cacao HOM05D001935 ORTHO05D001700 4.0e-07 58.9 128 32.8
VMungo1383G2590 Vigna mungo HOM05D001935 ORTHO05D010109 4.0e-07 58.9 127 30.7
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 5.3e-07 58.5 164 29.3
CsaV3_7G029910 Cucumis sativus L. HOM05D001935 ORTHO05D010109 5.3e-07 58.5 78 42.3
Lj6P749T50 Lonicera japonica HOM05D001935 ORTHO05D001700 5.3e-07 58.5 173 31.2
MBI10_g37756_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 5.3e-07 58.5 167 30.5
TAR374G0867 Trochodendron aralioides HOM05D001935 ORTHO05D001700 6.9e-07 58.2 173 30.1
Peaxi162Scf39498g00005 Petunia axillaris HOM05D001935 ORTHO05D001700 9.0e-07 57.8 146 31.5
PGR044G2318 Punica granatum HOM05D001935 ORTHO05D010109 9.0e-07 57.8 161 30.4
Duzib251G0665 Durio zibethinus HOM05D001935 ORTHO05D001700 1.2e-06 57.4 115 33.0
Glyma.20G124200 Glycine max HOM05D001935 ORTHO05D001700 1.2e-06 57.4 119 33.6
Sc10g0000980 Simmondsia chinensis HOM05D001935 ORTHO05D001700 1.2e-06 57.4 142 31.0
PGR042G0803 Punica granatum HOM05D001935 ORTHO05D001700 1.5e-06 57.0 177 27.7
SGA_v2.0_scaffold14G06923 Striga asiatica HOM05D001935 ORTHO05D001700 1.5e-06 57.0 164 29.3
Actinidia36351 Actinidia chinensis HOM05D001935 ORTHO05D001700 2.0e-06 56.6 168 32.1
Lsat_1_v5_gn_4_15421 Lactuca sativa HOM05D001935 ORTHO05D001700 2.0e-06 56.6 168 28.0
Phvul.007G035500 Phaseolus vulgaris HOM05D001935 ORTHO05D001700 2.0e-06 56.6 116 34.5
Sabra08G0096000 Salix brachista HOM05D001935 ORTHO05D001700 2.0e-06 56.6 119 31.9
Glyma.10G266300 Glycine max HOM05D001935 ORTHO05D001700 2.6e-06 56.2 129 29.5
Manes.14G136100 Manihot esculenta HOM05D001935 ORTHO05D001700 2.6e-06 56.2 132 31.8
Eucgr.F02810 Eucalyptus grandis HOM05D001935 ORTHO05D001700 3.4e-06 55.8 124 32.3
AUR62023260 Chenopodium quinoa HOM05D001935 ORTHO05D001700 4.5e-06 55.5 174 31.6
MBI10_g41075_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 4.5e-06 55.5 87 35.6
Nitab4.5_0001648g0030 Nicotiana tabacum HOM05D001935 ORTHO05D001700 4.5e-06 55.5 171 30.4
Prupe.3G150600 Prunus persica HOM05D001935 ORTHO05D001700 4.5e-06 55.5 155 27.7
PGR102G2009 Punica granatum HOM05D001935 ORTHO05D001700 4.5e-06 55.5 103 31.1
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 4.5e-06 55.5 158 27.2
AUR62024667 Chenopodium quinoa HOM05D001935 ORTHO05D010109 5.8e-06 55.1 141 29.1
ECA248G0856 Erigeron canadensis HOM05D001935 ORTHO05D001700 5.8e-06 55.1 134 27.6
Solyc01g009490.1 Solanum lycopersicum HOM05D001935 ORTHO05D001700 5.8e-06 55.1 108 32.4
HanXRQChr15g0477371 Helianthus annuus HOM05D001935 ORTHO05D001700 7.6e-06 54.7 101 30.7
HanXRQChr17g0567051 Helianthus annuus HOM05D001935 ORTHO05D001700 7.6e-06 54.7 166 24.7
Manes.06G062400 Manihot esculenta HOM05D001935 ORTHO05D001700 7.6e-06 54.7 134 31.3
Potri.008G127200 Populus trichocarpa HOM05D001935 ORTHO05D001700 7.6e-06 54.7 119 31.1
RcHm_v2.0_Chr3g0493681 Rosa chinensis HOM05D001935 ORTHO05D001700 7.6e-06 54.7 99 32.3
SEGI_32719 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 7.6e-06 54.7 147 25.2
MSTRG.3539 Avicennia marina HOM05D001935 ORTHO05D001700 9.9e-06 54.3 171 31.0
CDE06G0938 Ceratophyllum demersum HOM05D001935 ORTHO05D001700 9.9e-06 54.3 137 27.7
Lalb_Chr10g0096321 Lupinus albus HOM05D001935 ORTHO05D001700 9.9e-06 54.3 126 32.5


User provided reference genes

Program Settings