Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g275 Utricularia gibba HOM05D005760 ORTHO05D007113 0.0e+00 1087.8 577 100.0
MSTRG.25441 Avicennia marina HOM05D005760 ORTHO05D007113 6.9e-166 588.2 585 55.7
SalBow7G4130 Salvia bowleyana HOM05D005760 ORTHO05D007113 1.1e-160 570.9 591 55.5
Migut.C01256 Erythranthe guttata HOM05D005760 ORTHO05D007113 2.6e-160 569.7 581 55.2
Dinv41715 Davidia involucrata HOM05D005760 ORTHO05D007113 3.9e-153 545.8 589 53.3
QL02p033685 Quercus lobata HOM05D005760 ORTHO05D007113 1.0e-148 531.2 592 52.4
SGA_v2.0_scaffold118G32485 Striga asiatica HOM05D005760 ORTHO05D007113 7.2e-147 525.0 577 52.9
Actinidia23335 Actinidia chinensis HOM05D005760 ORTHO05D007113 2.1e-146 523.5 589 51.4
Haze_22520 Corylus avellana HOM05D005760 ORTHO05D007113 2.7e-146 523.1 601 51.2
Rhsim06G0094000 Rhododendron simsii HOM05D005760 ORTHO05D007113 1.0e-145 521.2 592 51.4
Cfa013846 Carpinus fangiana HOM05D005760 ORTHO05D007113 4.4e-144 515.8 597 50.4
Psat6g094080 Pisum sativum HOM05D005760 ORTHO05D007113 4.4e-144 515.8 589 50.9
Ciclev10000028m.g Citrus clementina HOM05D005760 ORTHO05D007113 7.0e-142 508.4 587 51.1
Manes.18G101200 Manihot esculenta HOM05D005760 ORTHO05D007113 7.0e-142 508.4 595 51.6
Duzib116G0663 Durio zibethinus HOM05D005760 ORTHO05D007113 3.5e-141 506.1 594 49.7
Medtr1g050670 Medicago truncatula HOM05D005760 ORTHO05D007113 3.5e-141 506.1 589 50.4
Thecc.08G184000 Theobroma cacao HOM05D005760 ORTHO05D007113 5.9e-141 505.4 577 51.1
GSVIVG01034473001 Vitis vinifera HOM05D005760 ORTHO05D007113 5.9e-141 505.4 589 50.3
COL.COLO4_04233 Corchorus olitorius HOM05D005760 ORTHO05D007113 1.7e-140 503.8 590 49.2
Lj5g0008525 Lotus japonicus HOM05D005760 ORTHO05D007113 3.2e-139 499.6 603 48.8
arahy.Tifrunner.gnm1.ann1.H1JXTH Arachis hypogaea HOM05D005760 ORTHO05D007113 5.5e-139 498.8 587 49.7
TAR628G1581 Trochodendron aralioides HOM05D005760 ORTHO05D007113 7.2e-139 498.4 595 49.4
Ca_11749_v3 Cicer arietinum L. HOM05D005760 ORTHO05D007113 9.4e-139 498.0 591 49.2
Cc10_g10700 Coffea canephora HOM05D005760 ORTHO05D007113 1.2e-138 497.7 580 50.7
TPR.G22709 Trifolium pratense HOM05D005760 ORTHO05D007113 1.2e-138 497.7 603 49.4
Sabra19G0094600 Salix brachista HOM05D005760 ORTHO05D007113 4.7e-138 495.7 586 50.5
arahy.Tifrunner.gnm1.ann1.BNJ0D6 Arachis hypogaea HOM05D005760 ORTHO05D007113 6.1e-138 495.4 587 49.7
Gorai.009G263800 Gossypium raimondii HOM05D005760 ORTHO05D007113 1.0e-137 494.6 597 49.6
Atru.chr13.1758 Acer truncatum HOM05D005760 ORTHO05D007113 1.4e-137 494.2 576 50.2
Glyma.02G158100 Glycine max HOM05D005760 ORTHO05D007113 1.4e-137 494.2 592 50.0
Gohir.A05G250600 Gossypium hirsutum HOM05D005760 ORTHO05D007113 1.4e-137 494.2 601 49.1
Gohir.D05G253200 Gossypium hirsutum HOM05D005760 ORTHO05D007113 1.4e-137 494.2 597 49.1
Potri.019G083100 Populus trichocarpa HOM05D005760 ORTHO05D007113 1.8e-137 493.8 594 52.2
VMungo0720G1167 Vigna mungo HOM05D005760 ORTHO05D007113 5.2e-137 492.3 593 49.9
Hma1.2p1_0004F.1_g004045 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 6.8e-137 491.9 600 49.0
Prupe.8G057200 Prunus persica HOM05D005760 ORTHO05D007113 1.2e-136 491.1 588 51.4
Peaxi162Scf00268g01123 Petunia axillaris HOM05D005760 ORTHO05D007113 3.7e-135 486.1 588 49.3
CAN.G199.9 Capsicum annuum HOM05D005760 ORTHO05D007113 1.1e-134 484.6 597 48.7
Phvul.007G245600 Phaseolus vulgaris HOM05D005760 ORTHO05D007113 5.4e-134 482.3 592 49.7
PGR102G0553 Punica granatum HOM05D005760 ORTHO05D007113 9.1e-134 481.5 599 48.2
MD05G1041500 Malus domestica HOM05D005760 ORTHO05D007113 1.1e-131 474.6 598 49.8
MD10G1047900 Malus domestica HOM05D005760 ORTHO05D007113 4.2e-131 472.6 589 48.9
Nn1g08372 Nelumbo nucifera HOM05D005760 ORTHO05D007113 5.5e-131 472.2 601 47.6
Lalb_Chr03g0036151 Lupinus albus HOM05D005760 ORTHO05D007113 7.2e-131 471.9 604 49.3
FAN15G1969 Fragaria x ananassa HOM05D005760 ORTHO05D007113 2.1e-130 470.3 585 49.6
RcHm_v2.0_Chr6g0272031 Rosa chinensis HOM05D005760 ORTHO05D007113 8.0e-130 468.4 589 49.4
Solyc06g065360.3 Solanum lycopersicum HOM05D005760 ORTHO05D007113 1.0e-129 468.0 584 51.5
FvH4_2g11773 Fragaria vesca HOM05D005760 ORTHO05D007113 3.0e-129 466.5 589 50.1
CANSAT78G0610 Cannabis sativa HOM05D005760 ORTHO05D007113 2.0e-128 463.8 591 46.4
FAN24G1577 Fragaria x ananassa HOM05D005760 ORTHO05D007113 3.4e-128 463.0 589 49.7
Nitab4.5_0000303g0150 Nicotiana tabacum HOM05D005760 ORTHO05D007113 3.4e-128 463.0 597 48.7
Sopen06g023840 Solanum pennellii HOM05D005760 ORTHO05D007113 3.4e-128 463.0 582 51.0
Sp1g30370 Schrenkiella parvula HOM05D005760 ORTHO05D007113 4.4e-128 462.6 577 50.4
TWI34G1956 Tripterygium wilfordii HOM05D005760 ORTHO05D007113 2.8e-127 459.9 588 48.8
THA.LOC104806788 Tarenaya hassleriana HOM05D005760 ORTHO05D007113 1.8e-126 457.2 576 49.1
Nitab4.5_0002500g0010 Nicotiana tabacum HOM05D005760 ORTHO05D007113 5.4e-126 455.7 593 48.7
EL10Ac1g00088 Beta vulgaris HOM05D005760 ORTHO05D007113 7.0e-126 455.3 607 45.3
Sed0013995 Sechium edule HOM05D005760 ORTHO05D007113 1.2e-125 454.5 596 47.8
CsaV3_2G033490 Cucumis sativus L. HOM05D005760 ORTHO05D007113 2.9e-124 449.9 598 46.7
Sc23g0001270 Simmondsia chinensis HOM05D005760 ORTHO05D007113 3.3e-123 446.4 589 46.0
CiPaw.08G058900 Carya illinoinensis HOM05D005760 ORTHO05D007113 4.3e-123 446.0 593 46.9
ClCG11G008140 Citrullus lanatus HOM05D005760 ORTHO05D007113 3.6e-122 443.0 590 46.6
Hund27088 Selenicereus undatus HOM05D005760 ORTHO05D007113 1.4e-121 441.0 611 44.0
Aa31LG6G8840 Aethionema arabicum HOM05D005760 ORTHO05D007113 2.3e-121 440.3 577 49.7
ATR0003G012 Amborella trichopoda HOM05D005760 ORTHO05D007113 2.6e-120 436.8 581 46.6
AL1G50540 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 5.8e-120 435.6 577 48.4
AUR62004640 Chenopodium quinoa HOM05D005760 ORTHO05D007113 5.8e-120 435.6 609 44.5
vmacro12489 Vaccinium macrocarpon HOM05D005760 ORTHO05D007113 3.7e-119 433.0 578 46.0
Hma1.2p1_0004F.1_g004050 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 4.1e-118 429.5 488 51.0
DCAR_001048 Daucus carota HOM05D005760 ORTHO05D007113 5.4e-118 429.1 581 45.1
Thhalv10001809m.g Eutrema salsugineum HOM05D005760 ORTHO05D007113 5.4e-118 429.1 576 45.5
AT1G35660 Arabidopsis thaliana HOM05D005760 ORTHO05D007113 7.0e-118 428.7 577 48.4
Carub.0001s3325 Capsella rubella HOM05D005760 ORTHO05D007113 1.2e-117 427.9 581 47.5
CARHR034440 Cardamine hirsuta HOM05D005760 ORTHO05D007113 2.7e-117 426.8 581 48.9
PSO170G3854 Papaver somniferum HOM05D005760 ORTHO05D007113 7.8e-117 425.2 585 45.5
AUR62022696 Chenopodium quinoa HOM05D005760 ORTHO05D007113 1.0e-116 424.9 611 43.0
Aqoxy6G00127 Aquilegia oxysepala HOM05D005760 ORTHO05D007113 6.6e-116 422.2 599 46.4
Ah.05g178160 Amaranthus hybridus HOM05D005760 ORTHO05D007113 1.9e-115 420.6 605 43.5
PSO782G3241 Papaver somniferum HOM05D005760 ORTHO05D007113 2.1e-114 417.2 583 46.7
Lsat_1_v5_gn_1_10440 Lactuca sativa HOM05D005760 ORTHO05D007113 3.6e-114 416.4 577 44.4
Lj4A496G12 Lonicera japonica HOM05D005760 ORTHO05D007113 3.6e-114 416.4 433 54.7
BcaC08g43328 Brassica carinata HOM05D005760 ORTHO05D007113 2.3e-113 413.7 575 46.3
C06p06840 Brassica napus HOM05D005760 ORTHO05D007113 2.3e-113 413.7 578 46.2
BolC6t35790H Brassica oleracea HOM05D005760 ORTHO05D007113 2.3e-113 413.7 578 46.2
Eucgr.F04123 Eucalyptus grandis HOM05D005760 ORTHO05D007113 2.3e-113 413.7 497 49.9
BcaB07g33624 Brassica carinata HOM05D005760 ORTHO05D007113 6.8e-113 412.1 577 46.1
A06p02320 Brassica napus HOM05D005760 ORTHO05D007113 2.9e-111 406.8 577 46.1
ECA152G0004 Erigeron canadensis HOM05D005760 ORTHO05D007113 2.9e-111 406.8 577 45.9
BraA06t23439Z Brassica rapa HOM05D005760 ORTHO05D007113 1.1e-110 404.8 577 45.9
Os01g0873800 Oryza sativa ssp. japonica HOM05D005760 ORTHO05D007113 1.5e-107 394.4 582 43.1
HanXRQChr04g0107521 Helianthus annuus HOM05D005760 ORTHO05D007113 2.8e-106 390.2 576 43.4
Zm00001eb146280 Zea mays HOM05D005760 ORTHO05D007113 3.4e-104 383.3 579 43.4
SHI09011 Sapria himalayana HOM05D005760 ORTHO05D007113 8.3e-103 378.6 578 42.2
QL02p033674 Quercus lobata HOM05D005760 ORTHO05D007113 2.7e-101 373.6 537 44.5
Lj4C503G3 Lonicera japonica HOM05D005760 ORTHO05D007113 2.3e-100 370.5 478 48.1
MELO3C008121.2 Cucumis melo HOM05D005760 ORTHO05D007113 2.6e-96 357.1 591 40.3
SpUn0216_0010 Schrenkiella parvula HOM05D005760 ORTHO05D007113 6.9e-89 332.4 432 49.5
SEGI_03904 Sequoiadendron giganteum HOM05D005760 ORTHO05D007113 1.5e-88 331.3 543 40.5
Oeu000547.3 Olea europaea HOM05D005760 ORTHO05D007113 9.9e-88 328.6 374 52.7
CSS0014231 Camellia sinensis var. sinensis HOM05D005760 ORTHO05D007113 7.3e-83 312.4 384 50.8
BolC6t35788H Brassica oleracea HOM05D005760 ORTHO05D007113 2.4e-73 280.8 338 50.0
Mapoly0036s0148 Marchantia polymorpha HOM05D005760 ORTHO05D007113 1.2e-69 268.5 602 35.7
AagrBONN_evm.TU.Sc2ySwM_117.2253 Anthoceros agrestis HOM05D005760 ORTHO05D007113 7.6e-64 249.2 546 35.5
Pp3c15_6380 Physcomitrium patens HOM05D005760 ORTHO05D007113 9.3e-62 242.3 597 32.5
Pp3c15_6360 Physcomitrium patens HOM05D005760 ORTHO05D007113 2.2e-58 231.1 552 33.7
CDE08G0174 Ceratophyllum demersum HOM05D003774 ORTHO05D009174 4.5e-56 223.4 264 47.0
CBR_g40969 Chara braunii HOM05D005760 ORTHO05D007113 1.2e-45 188.7 659 29.4
QL02p033652 Quercus lobata HOM05D005760 ORTHO05D007113 1.9e-38 164.9 417 31.9
Carub.0001s0936 Capsella rubella HOM05D005760 ORTHO05D007113 7.2e-38 162.9 464 28.7
AL1G47130 Arabidopsis lyrata HOM05D005760 ORTHO05D007113 1.0e-23 115.9 426 27.0
Cpa.g.sc66.39 Carica papaya HOM05D005760 ORTHO05D007113 1.9e-22 111.7 233 36.5
ATR1101G015 Amborella trichopoda HOM05D005760 ORTHO05D007113 4.7e-13 80.5 69 59.4
Cpa.g.sc66.40 Carica papaya HOM05D005760 ORTHO05D007113 1.7e-10 72.0 45 71.1
Hma1.2p1_0004F.1_g004060 Hydrangea macrophylla HOM05D005760 ORTHO05D007113 2.2e-10 71.6 100 41.0
HPP92_025156 Vanilla planifolia HOM05D005760 ORTHO05D007113 8.3e-10 69.7 77 48.1
Lj4C496G3 Lonicera japonica HOM05D005760 ORTHO05D007113 9.2e-09 66.2 40 80.0
CDE08G1571 Ceratophyllum demersum HOM05D005760 ORTHO05D007113 1.6e-08 65.5 66 51.5
Lj4C503T2 Lonicera japonica HOM05D005760 ORTHO05D007113 4.3e-06 57.4 96 39.6


User provided reference genes

Program Settings