Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2740 Utricularia gibba HOM05D006820 ORTHO05D008526 2.4e-133 478.8 237 100.0
Migut.B00016 Erythranthe guttata HOM05D006820 ORTHO05D008526 6.9e-88 327.8 232 70.3
SGA_v2.0_scaffold58G20319 Striga asiatica HOM05D006820 ORTHO05D008526 4.5e-87 325.1 240 67.9
Lj9A405G64 Lonicera japonica HOM05D006820 ORTHO05D008526 7.9e-84 314.3 234 66.2
TAR625G0986 Trochodendron aralioides HOM05D006820 ORTHO05D008526 7.9e-84 314.3 231 66.7
CiPaw.06G118200 Carya illinoinensis HOM05D006820 ORTHO05D008526 4.4e-82 308.5 227 65.2
Atru.chr5.3527 Acer truncatum HOM05D006820 ORTHO05D008526 7.4e-82 307.8 229 64.6
Manes.04G064800 Manihot esculenta HOM05D006820 ORTHO05D008526 9.7e-82 307.4 231 64.5
Nn6g31730 Nelumbo nucifera HOM05D006820 ORTHO05D008526 1.3e-81 307.0 231 65.4
PSO541G0178 Papaver somniferum HOM05D006820 ORTHO05D008526 1.1e-80 303.9 230 66.1
AL7G10240 Arabidopsis lyrata HOM05D006820 ORTHO05D008526 1.4e-80 303.5 225 65.3
THA.LOC104804082 Tarenaya hassleriana HOM05D006820 ORTHO05D008526 1.8e-80 303.1 229 63.3
Peaxi162Scf00362g00246 Petunia axillaris HOM05D006820 ORTHO05D008526 2.4e-80 302.8 234 65.0
Sp7g37400 Schrenkiella parvula HOM05D006820 ORTHO05D008526 2.4e-80 302.8 230 65.2
AT4G38370 Arabidopsis thaliana HOM05D006820 ORTHO05D008526 7.0e-80 301.2 226 65.9
PSO675G9330 Papaver somniferum HOM05D006820 ORTHO05D008526 7.0e-80 301.2 229 65.9
PGSC0003DMG400014660 Solanum tuberosum HOM05D006820 ORTHO05D008526 7.0e-80 301.2 234 62.8
BolC3t19961H Brassica oleracea HOM05D000807 ORTHO05D000662 9.1e-80 300.8 230 65.2
BraA08t34377Z Brassica rapa HOM05D000807 ORTHO05D000662 9.1e-80 300.8 229 64.6
Gorai.008G040700 Gossypium raimondii HOM05D006820 ORTHO05D008526 1.5e-79 300.1 228 64.9
Nitab4.5_0011212g0060 Nicotiana tabacum HOM05D006820 ORTHO05D008526 2.0e-79 299.7 238 63.4
TWI79G0714 Tripterygium wilfordii HOM05D006820 ORTHO05D008526 2.0e-79 299.7 227 65.2
BcaC01g00229 Brassica carinata HOM05D006820 ORTHO05D008526 2.6e-79 299.3 232 64.7
Carub.0007s0026 Capsella rubella HOM05D006820 ORTHO05D008526 3.5e-79 298.9 227 64.8
Thecc.02G045600 Theobroma cacao HOM05D006820 ORTHO05D008526 4.5e-79 298.5 231 63.2
BcaC01g00221 Brassica carinata HOM05D006820 ORTHO05D008526 5.9e-79 298.1 231 64.9
CANSAT25G2916 Cannabis sativa HOM05D006820 ORTHO05D008526 5.9e-79 298.1 231 63.6
Ciclev10029216m.g Citrus clementina HOM05D006820 ORTHO05D008526 5.9e-79 298.1 229 63.8
Solyc01g112160.4 Solanum lycopersicum HOM05D006820 ORTHO05D008526 5.9e-79 298.1 234 63.7
Aa31LG6G16790 Aethionema arabicum HOM05D006820 ORTHO05D008526 7.7e-79 297.7 229 63.3
BraA08t34346Z Brassica rapa HOM05D006820 ORTHO05D008526 7.7e-79 297.7 231 65.4
Aqoxy6G01707 Aquilegia oxysepala HOM05D006820 ORTHO05D008526 1.0e-78 297.4 228 63.6
GSVIVG01023895001 Vitis vinifera HOM05D006820 ORTHO05D008526 1.0e-78 297.4 231 63.6
Eucgr.I01511 Eucalyptus grandis HOM05D006820 ORTHO05D008526 1.3e-78 297.0 226 65.0
Sopen01g054210 Solanum pennellii HOM05D006820 ORTHO05D008526 1.3e-78 297.0 234 63.7
CAN.G1725.10 Capsicum annuum HOM05D006820 ORTHO05D008526 1.7e-78 296.6 238 62.2
DCAR_015665 Daucus carota HOM05D006820 ORTHO05D008526 2.9e-78 295.8 230 62.2
Duzib132G0878 Durio zibethinus HOM05D006820 ORTHO05D008526 2.9e-78 295.8 231 63.2
Potri.009G165400 Populus trichocarpa HOM05D006820 ORTHO05D008526 3.8e-78 295.4 225 64.0
CSS0042496 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 6.5e-78 294.7 231 63.2
Haze_02054 Corylus avellana HOM05D006820 ORTHO05D008526 8.5e-78 294.3 245 59.6
PGR142G1762 Punica granatum HOM05D006820 ORTHO05D008526 1.1e-77 293.9 229 62.0
Thhalv10004876m.g Eutrema salsugineum HOM05D006820 ORTHO05D008526 1.9e-77 293.1 230 63.9
CARHR294110 Cardamine hirsuta HOM05D006820 ORTHO05D008526 9.4e-77 290.8 229 61.1
TPR.G18648 Trifolium pratense HOM05D006820 ORTHO05D008526 3.6e-76 288.9 229 60.7
Prupe.8G177600 Prunus persica HOM05D006820 ORTHO05D008526 6.1e-76 288.1 231 63.2
AUR62012929 Chenopodium quinoa HOM05D006820 ORTHO05D008526 8.0e-76 287.7 231 61.0
MD10G1138800 Malus domestica HOM05D006820 ORTHO05D008526 8.0e-76 287.7 232 62.9
Phvul.008G291600 Phaseolus vulgaris HOM05D006820 ORTHO05D008526 1.0e-75 287.3 231 60.2
Sc18g0005950 Simmondsia chinensis HOM05D006820 ORTHO05D008526 1.0e-75 287.3 231 62.8
CsaV3_5G012520 Cucumis sativus L. HOM05D006820 ORTHO05D008526 1.4e-75 287.0 232 62.5
QL11p053925 Quercus lobata HOM05D006820 ORTHO05D008526 1.4e-75 287.0 246 60.2
FvH4_2g16540 Fragaria vesca HOM05D006820 ORTHO05D008526 1.8e-75 286.6 231 60.6
Lsat_1_v5_gn_8_120400 Lactuca sativa HOM05D006820 ORTHO05D008526 2.3e-75 286.2 231 60.6
Glyma.14G001800 Glycine max HOM05D006820 ORTHO05D008526 3.0e-75 285.8 231 61.0
vmacro17294 Vaccinium macrocarpon HOM05D006820 ORTHO05D008526 3.0e-75 285.8 232 63.4
AUR62011713 Chenopodium quinoa HOM05D006820 ORTHO05D008526 3.9e-75 285.4 231 61.0
PSO017G7138 Papaver somniferum HOM05D006820 ORTHO05D008526 1.1e-74 283.9 228 62.7
ECA233G1752 Erigeron canadensis HOM05D006820 ORTHO05D008526 2.0e-74 283.1 213 64.3
FAN24G1561 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.0e-74 283.1 229 59.8
Medtr5g099030 Medicago truncatula HOM05D006820 ORTHO05D008526 2.6e-74 282.7 229 59.8
Actinidia32013 Actinidia chinensis HOM05D006820 ORTHO05D008526 3.3e-74 282.3 231 61.0
Ah.01g007660 Amaranthus hybridus HOM05D006820 ORTHO05D008526 4.4e-74 282.0 232 59.5
FAN15G1990 Fragaria x ananassa HOM05D006820 ORTHO05D008526 4.4e-74 282.0 231 60.2
VMungo0647G2489 Vigna mungo HOM05D006820 ORTHO05D008526 4.4e-74 282.0 231 60.2
RcHm_v2.0_Chr6g0280561 Rosa chinensis HOM05D006820 ORTHO05D008526 9.7e-74 280.8 231 60.2
LjContig00081g0000354 Lotus japonicus HOM05D006820 ORTHO05D008526 1.7e-73 280.0 228 61.0
EL10Ac9g21258 Beta vulgaris HOM05D006820 ORTHO05D008526 3.7e-73 278.9 237 58.2
arahy.Tifrunner.gnm1.ann1.6J1J15 Arachis hypogaea HOM05D006820 ORTHO05D008526 4.8e-73 278.5 228 60.1
FAN27G3410 Fragaria x ananassa HOM05D006820 ORTHO05D008526 6.3e-73 278.1 231 59.7
ATR0661G540 Amborella trichopoda HOM05D006820 ORTHO05D008526 1.1e-72 277.3 226 60.6
HanXRQChr14g0459061 Helianthus annuus HOM05D006820 ORTHO05D008526 2.4e-72 276.2 236 59.3
Hund06169 Selenicereus undatus HOM05D006820 ORTHO05D008526 9.1e-72 274.2 225 58.7
arahy.Tifrunner.gnm1.ann1.696HI2 Arachis hypogaea HOM05D006820 ORTHO05D008526 2.6e-71 272.7 228 59.2
CDE07G0154 Ceratophyllum demersum HOM05D006820 ORTHO05D008526 7.7e-71 271.2 228 58.8
RcHm_v2.0_Chr1g0329291 Rosa chinensis HOM05D006820 ORTHO05D008526 7.7e-71 271.2 232 58.6
Lalb_Chr10g0095311 Lupinus albus HOM05D006820 ORTHO05D008526 8.5e-70 267.7 229 58.5
PSO675G0855 Papaver somniferum HOM05D006820 ORTHO05D008526 8.0e-68 261.2 243 57.6
Gohir.A12G033700 Gossypium hirsutum HOM05D006820 ORTHO05D008526 1.0e-67 260.8 227 57.7
FvH4_7g04340 Fragaria vesca HOM05D006820 ORTHO05D008526 5.2e-67 258.5 232 56.5
PSO541G2729 Papaver somniferum HOM05D006820 ORTHO05D008526 8.8e-67 257.7 243 56.4
FAN01G0447 Fragaria x ananassa HOM05D006820 ORTHO05D008526 2.4e-64 249.6 250 52.8
Oeu021963.1 Olea europaea HOM05D006820 ORTHO05D008526 4.1e-64 248.8 219 59.4
FAN06G4449 Fragaria x ananassa HOM05D006820 ORTHO05D008526 3.5e-63 245.7 250 52.0
FAN03G3185 Fragaria x ananassa HOM05D006820 ORTHO05D008526 5.9e-63 245.0 250 52.0
SalBow1G3348 Salvia bowleyana HOM05D006820 ORTHO05D008526 2.5e-61 239.6 169 68.6
Gohir.D12G038800 Gossypium hirsutum HOM05D006820 ORTHO05D008526 1.6e-60 236.9 166 66.3
Zm00001eb088270 Zea mays HOM05D006820 ORTHO05D008526 6.1e-60 235.0 253 50.2
Os04g0224600 Oryza sativa ssp. japonica HOM05D006820 ORTHO05D008526 2.3e-59 233.0 228 53.1
MELO3C022591.2 Cucumis melo HOM05D006820 ORTHO05D008526 1.7e-57 226.9 166 65.1
Dinv41882 Davidia involucrata HOM05D006820 ORTHO05D008526 3.7e-57 225.7 149 70.5
Psat2g001280 Pisum sativum HOM05D006820 ORTHO05D008526 1.8e-56 223.4 164 64.6
Pp3c6_22700 Physcomitrium patens HOM05D006820 ORTHO05D008526 3.1e-56 222.6 233 52.8
Sed0016165 Sechium edule HOM05D006820 ORTHO05D008526 1.2e-55 220.7 169 63.9
ClCG02G009990 Citrullus lanatus HOM05D006820 ORTHO05D008526 3.8e-54 215.7 170 61.2
COL.COLO4_17938 Corchorus olitorius HOM05D006820 ORTHO05D008526 5.0e-54 215.3 169 61.5
Rhsim05G0047800 Rhododendron simsii HOM05D006820 ORTHO05D008526 8.0e-52 208.0 239 48.5
PSO170G2156 Papaver somniferum HOM05D006820 ORTHO05D008526 1.4e-51 207.2 168 60.1
RhsimUnG0142100 Rhododendron simsii HOM05D006820 ORTHO05D008526 6.8e-51 204.9 239 48.1
SMO347G0521 Selaginella moellendorffii HOM05D006820 ORTHO05D008526 6.8e-51 204.9 225 48.4
HPP92_025502 Vanilla planifolia HOM05D006820 ORTHO05D008526 8.9e-51 204.5 165 57.6
HPP92_025534 Vanilla planifolia HOM05D006820 ORTHO05D008526 7.5e-50 201.4 165 57.0
AagrBONN_evm.TU.Sc2ySwM_344.5004 Anthoceros agrestis HOM05D006820 ORTHO05D008526 2.8e-49 199.5 233 46.4
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 4.9e-49 198.7 231 46.3
Mapoly0119s0027 Marchantia polymorpha HOM05D006820 ORTHO05D008526 3.2e-48 196.1 229 47.6
C03p77090 Brassica napus HOM05D000564 ORTHO05D002780 2.9e-41 172.9 125 65.6
A08p24230 Brassica napus HOM05D000564 ORTHO05D002780 3.2e-40 169.5 125 63.2
CBR_g8644 Chara braunii HOM05D006820 ORTHO05D008526 2.7e-39 166.4 250 39.2
arahy.Tifrunner.gnm1.ann1.MXMJ8X Arachis hypogaea HOM05D006820 ORTHO05D008526 3.0e-38 162.9 149 54.4
Cc09_g10680 Coffea canephora HOM05D006820 ORTHO05D008526 2.0e-34 150.2 105 66.7
Cpa.g.sc20.200 Carica papaya HOM05D006820 ORTHO05D008526 1.1e-32 144.4 125 56.8
MD10G1042800 Malus domestica HOM05D006820 ORTHO05D008526 6.0e-31 138.7 152 52.6
MD05G1133800 Malus domestica HOM05D006820 ORTHO05D008526 1.9e-29 133.7 144 54.2
CSS0041656 Camellia sinensis var. sinensis HOM05D006820 ORTHO05D008526 1.1e-27 127.9 116 57.8
arahy.Tifrunner.gnm1.ann1.JU0VI1 Arachis hypogaea HOM05D006820 ORTHO05D008526 2.0e-26 123.6 106 58.5
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 4.4e-26 122.5 231 37.7
A09p68760 Brassica napus HOM05D006820 ORTHO05D008526 2.7e-15 86.7 102 44.1
BraA09t42215Z Brassica rapa HOM05D006820 ORTHO05D008526 2.7e-15 86.7 102 44.1
Cc00_g33760 Coffea canephora HOM05D006820 ORTHO05D008526 6.0e-15 85.5 64 60.9
Cc09_g10670 Coffea canephora HOM05D006820 ORTHO05D008526 6.0e-15 85.5 64 60.9
AUR62010100 Chenopodium quinoa HOM05D000002 ORTHO05D000001 5.1e-14 82.4 60 65.0
arahy.Tifrunner.gnm1.ann1.E18LML Arachis hypogaea HOM05D006820 ORTHO05D008526 1.4e-08 64.3 47 61.7
ClCG02G010000 Citrullus lanatus HOM05D006820 ORTHO05D008526 3.9e-06 56.2 27 81.5


User provided reference genes

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