Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2679 Utricularia gibba HOM05D004327 ORTHO05D005032 1.7e-189 666.0 378 100.0
MSTRG.26218 Avicennia marina HOM05D004327 ORTHO05D005032 2.9e-152 542.3 376 78.7
Migut.K00240 Erythranthe guttata HOM05D004327 ORTHO05D005032 5.0e-149 531.6 377 76.4
CSS0007595 Camellia sinensis var. sinensis HOM05D004327 ORTHO05D005032 1.2e-147 526.9 379 78.6
MSTRG.6222 Avicennia marina HOM05D004327 ORTHO05D005032 3.1e-146 522.3 375 77.1
Dinv42719 Davidia involucrata HOM05D004327 ORTHO05D005032 2.6e-145 519.2 374 75.7
Hma1.2p1_1025F.1_g249340 Hydrangea macrophylla HOM05D004327 ORTHO05D005032 4.4e-145 518.5 379 76.0
SGA_v2.0_scaffold66G22446 Striga asiatica HOM05D004327 ORTHO05D005032 8.3e-144 514.2 376 79.8
Cc06_g13210 Coffea canephora HOM05D004327 ORTHO05D005032 1.1e-143 513.8 372 78.0
GSVIVG01029211001 Vitis vinifera HOM05D004327 ORTHO05D005032 4.6e-142 508.4 368 78.3
Nn8g40460 Nelumbo nucifera HOM05D004327 ORTHO05D005032 1.0e-141 507.3 379 77.3
Dinv43382 Davidia involucrata HOM05D004327 ORTHO05D005032 2.3e-141 506.1 365 75.6
Potri.018G092000 Populus trichocarpa HOM05D004327 ORTHO05D005032 1.1e-140 503.8 368 77.7
Manes.14G154300 Manihot esculenta HOM05D004327 ORTHO05D005032 1.5e-140 503.4 352 78.7
Prupe.1G085300 Prunus persica HOM05D004327 ORTHO05D005032 2.5e-140 502.7 363 74.1
Thecc.09G176900 Theobroma cacao HOM05D004327 ORTHO05D005032 3.3e-140 502.3 352 79.8
CANSAT11G1121 Cannabis sativa HOM05D004327 ORTHO05D005032 5.6e-140 501.5 376 72.3
Solyc07g019530.3 Solanum lycopersicum HOM05D004327 ORTHO05D005032 5.6e-140 501.5 373 79.4
Sopen07g008040 Solanum pennellii HOM05D004327 ORTHO05D005032 5.6e-140 501.5 373 79.4
SalBow6G1961 Salvia bowleyana HOM05D004327 ORTHO05D005032 7.3e-140 501.1 365 79.7
Duzib150G0132 Durio zibethinus HOM05D004327 ORTHO05D005032 1.6e-139 500.0 352 81.8
TAR343G0001 Trochodendron aralioides HOM05D004327 ORTHO05D005032 4.7e-139 498.4 373 74.5
COL.COLO4_37716 Corchorus olitorius HOM05D004327 ORTHO05D005032 6.2e-139 498.0 362 77.3
Peaxi162Scf00231g00726 Petunia axillaris HOM05D004327 ORTHO05D005032 6.2e-139 498.0 363 82.1
Atru.chr7.613 Acer truncatum HOM05D004327 ORTHO05D005032 8.1e-139 497.7 354 76.3
Cpa.g.sc233.7 Carica papaya HOM05D004327 ORTHO05D005032 8.1e-139 497.7 354 77.1
Gohir.D08G093800 Gossypium hirsutum HOM05D004327 ORTHO05D005032 8.1e-139 497.7 352 80.4
ATR0580G352 Amborella trichopoda HOM05D004327 ORTHO05D005032 1.4e-138 496.9 376 76.9
Rhsim03G0264600 Rhododendron simsii HOM05D004327 ORTHO05D005032 1.4e-138 496.9 365 80.3
Migut.J01485 Erythranthe guttata HOM05D004327 ORTHO05D005032 1.8e-138 496.5 362 73.5
DCAR_017971 Daucus carota HOM05D004327 ORTHO05D005032 2.3e-138 496.1 363 74.1
Gohir.A08G084200 Gossypium hirsutum HOM05D004327 ORTHO05D005032 2.3e-138 496.1 352 80.1
QL02p097831 Quercus lobata HOM05D004327 ORTHO05D005032 2.3e-138 496.1 352 79.0
ClCG11G012140 Citrullus lanatus HOM05D004327 ORTHO05D005032 3.1e-138 495.7 363 74.1
Ciclev10008675m.g Citrus clementina HOM05D004327 ORTHO05D005032 3.1e-138 495.7 352 80.7
HanXRQChr11g0322421 Helianthus annuus HOM05D004327 ORTHO05D005032 6.8e-138 494.6 373 76.7
MD13G1253000 Malus domestica HOM05D004327 ORTHO05D005032 6.8e-138 494.6 356 74.4
CiPaw.07G192500 Carya illinoinensis HOM05D004327 ORTHO05D005032 1.5e-137 493.4 352 75.9
CsaV3_2G008420 Cucumis sativus L. HOM05D004327 ORTHO05D005032 2.6e-137 492.7 352 75.3
Ca_21229_v3 Cicer arietinum L. HOM05D004327 ORTHO05D005032 9.9e-137 490.7 352 79.0
Sed0007507 Sechium edule HOM05D004327 ORTHO05D005032 1.7e-136 490.0 363 73.0
VMungo1215G1888 Vigna mungo HOM05D004327 ORTHO05D005032 1.7e-136 490.0 352 75.6
Medtr4g127970 Medicago truncatula HOM05D004327 ORTHO05D005032 2.2e-136 489.6 354 75.4
Gorai.004G099500 Gossypium raimondii HOM05D004327 ORTHO05D005032 2.9e-136 489.2 363 78.0
Duzib168G0099 Durio zibethinus HOM05D004327 ORTHO05D005032 4.9e-136 488.4 362 77.3
ECA240G0157 Erigeron canadensis HOM05D004327 ORTHO05D005032 4.9e-136 488.4 373 72.1
MD16G1257500 Malus domestica HOM05D004327 ORTHO05D005032 1.1e-135 487.3 352 74.1
FAN22G1646 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.4e-135 486.9 363 75.8
Glyma.13G096600 Glycine max HOM05D004327 ORTHO05D005032 1.4e-135 486.9 353 75.1
Glyma.17G062900 Glycine max HOM05D004327 ORTHO05D005032 1.4e-135 486.9 352 75.6
Lj4g0017259 Lotus japonicus HOM05D004327 ORTHO05D005032 1.4e-135 486.9 365 73.4
FvH4_4g08170 Fragaria vesca HOM05D004327 ORTHO05D005032 1.9e-135 486.5 363 76.0
Lalb_Chr07g0180501 Lupinus albus HOM05D004327 ORTHO05D005032 2.4e-135 486.1 352 74.7
arahy.Tifrunner.gnm1.ann1.IHC8NS Arachis hypogaea HOM05D004327 ORTHO05D005032 2.1e-134 483.0 352 74.7
arahy.Tifrunner.gnm1.ann1.UF0NDT Arachis hypogaea HOM05D004327 ORTHO05D005032 3.5e-134 482.3 365 72.9
Eucgr.C00153 Eucalyptus grandis HOM05D004327 ORTHO05D005032 3.5e-134 482.3 352 74.7
RcHm_v2.0_Chr4g0402371 Rosa chinensis HOM05D004327 ORTHO05D005032 3.0e-133 479.2 352 73.9
Phvul.003G145300 Phaseolus vulgaris HOM05D004327 ORTHO05D005032 3.9e-133 478.8 352 73.6
vmacro06012 Vaccinium macrocarpon HOM05D004327 ORTHO05D005032 6.6e-133 478.0 350 74.3
TPR.G5449 Trifolium pratense HOM05D004327 ORTHO05D005032 1.9e-132 476.5 352 77.0
Actinidia17317 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.5e-132 476.1 373 76.1
PSO063G6085 Papaver somniferum HOM05D004327 ORTHO05D005032 7.3e-132 474.6 380 71.3
PSO170G3199 Papaver somniferum HOM05D004327 ORTHO05D005032 7.3e-132 474.6 380 72.9
CDE04G3746 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 9.6e-132 474.2 369 76.2
CAN.G210.1 Capsicum annuum HOM05D004327 ORTHO05D005032 4.7e-131 471.9 349 79.9
HPP92_019412 Vanilla planifolia HOM05D004327 ORTHO05D005032 4.0e-130 468.8 376 73.1
Sabra18G0079100 Salix brachista HOM05D004327 ORTHO05D005032 1.5e-129 466.8 368 73.6
Sc14g0001280 Simmondsia chinensis HOM05D004327 ORTHO05D005032 2.6e-129 466.1 351 75.5
MBI14_g17374_MAGBIO Magnolia biondii HOM05D004327 ORTHO05D005032 5.8e-129 464.9 379 72.0
ECA236G3505 Erigeron canadensis HOM05D004327 ORTHO05D005032 1.9e-127 459.9 379 70.2
Aqoxy7G03046 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 3.2e-127 459.1 353 77.3
Lsat_1_v5_gn_7_54620 Lactuca sativa HOM05D004327 ORTHO05D005032 3.2e-127 459.1 351 76.1
THA.LOC104811786 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 9.3e-127 457.6 352 74.7
Thhalv10013843m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 7.8e-126 454.5 359 72.7
Hund09030 Selenicereus undatus HOM05D004327 ORTHO05D005032 1.0e-125 454.1 368 73.1
Psat4g169000 Pisum sativum HOM05D004327 ORTHO05D005032 1.3e-125 453.8 350 71.7
Zm00001eb178290 Zea mays HOM05D004327 ORTHO05D005032 3.0e-125 452.6 363 75.2
CARHR271210 Cardamine hirsuta HOM05D004327 ORTHO05D005032 5.1e-125 451.8 352 73.3
AL8G33390 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 6.6e-125 451.4 353 70.0
BolC3t13942H Brassica oleracea HOM05D004327 ORTHO05D005032 8.7e-125 451.1 358 71.5
Carub.0008s1793 Capsella rubella HOM05D004327 ORTHO05D005032 8.7e-125 451.1 352 72.2
BcaB01g04457 Brassica carinata HOM05D004327 ORTHO05D005032 1.5e-124 450.3 358 71.5
Dinv41244 Davidia involucrata HOM05D004327 ORTHO05D005032 1.5e-124 450.3 320 79.7
C03p15000 Brassica napus HOM05D004327 ORTHO05D005032 2.5e-124 449.5 350 73.1
CDE07G0842 Ceratophyllum demersum HOM05D004327 ORTHO05D005032 4.3e-124 448.7 355 75.2
BraA03t10592Z Brassica rapa HOM05D004327 ORTHO05D005032 5.6e-124 448.4 358 71.2
Sp6g19130 Schrenkiella parvula HOM05D004327 ORTHO05D005032 7.3e-124 448.0 352 72.7
Os08g0242900 Oryza sativa ssp. japonica HOM05D004327 ORTHO05D005032 1.6e-123 446.8 364 75.0
AT5G57410 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 2.1e-123 446.4 350 69.7
THA.LOC104813521 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 2.1e-123 446.4 387 69.8
A03p12840 Brassica napus HOM05D004327 ORTHO05D005032 3.6e-123 445.7 350 72.6
EL10Ac8g18287 Beta vulgaris HOM05D004327 ORTHO05D005032 1.4e-122 443.7 350 72.3
AUR62033220 Chenopodium quinoa HOM05D004327 ORTHO05D005032 3.1e-122 442.6 357 74.2
BcaC01g06496 Brassica carinata HOM05D004327 ORTHO05D005032 5.3e-122 441.8 355 72.4
PGR142G4100 Punica granatum HOM05D004327 ORTHO05D005032 4.5e-121 438.7 365 68.2
Aa31LG3G13300 Aethionema arabicum HOM05D004327 ORTHO05D005032 1.1e-119 434.1 372 68.0
THA.LOC104803493 Tarenaya hassleriana HOM05D004327 ORTHO05D005032 1.9e-119 433.3 367 70.3
CARHR109440 Cardamine hirsuta HOM05D004327 ORTHO05D005032 2.3e-117 426.4 358 65.9
Carub.0003s3311 Capsella rubella HOM05D004327 ORTHO05D005032 3.0e-117 426.0 352 71.6
AL3G53050 Arabidopsis lyrata HOM05D004327 ORTHO05D005032 1.1e-116 424.1 352 66.8
Sp3g32340 Schrenkiella parvula HOM05D004327 ORTHO05D005032 4.3e-116 422.2 350 69.7
BcaC04g22882 Brassica carinata HOM05D004327 ORTHO05D005032 1.6e-115 420.2 356 69.9
C09p14270 Brassica napus HOM05D004327 ORTHO05D005032 1.6e-115 420.2 356 69.9
BcaB07g31641 Brassica carinata HOM05D004327 ORTHO05D005032 6.2e-115 418.3 350 70.9
A09p12090 Brassica napus HOM05D004327 ORTHO05D005032 6.2e-115 418.3 356 68.8
BolC9t54328H Brassica oleracea HOM05D004327 ORTHO05D005032 6.2e-115 418.3 350 66.6
BraA09t36853Z Brassica rapa HOM05D004327 ORTHO05D005032 8.1e-115 417.9 361 68.1
AUR62021302 Chenopodium quinoa HOM05D004327 ORTHO05D005032 3.1e-114 416.0 359 71.3
Sed0007415 Sechium edule HOM05D004327 ORTHO05D005032 9.0e-114 414.5 363 64.7
SHI02909 Sapria himalayana HOM05D004327 ORTHO05D005032 1.5e-113 413.7 356 68.5
Lalb_Chr13g0300201 Lupinus albus HOM05D004327 ORTHO05D005032 2.0e-113 413.3 343 67.6
CiPaw.08G036000 Carya illinoinensis HOM05D004327 ORTHO05D005032 3.4e-113 412.5 367 63.8
Aa31LG8G15970 Aethionema arabicum HOM05D004327 ORTHO05D005032 5.8e-113 411.8 353 72.0
AagrBONN_evm.TU.Sc2ySwM_117.785 Anthoceros agrestis HOM05D004327 ORTHO05D005032 1.3e-112 410.6 395 59.0
Thhalv10022742m.g Eutrema salsugineum HOM05D004327 ORTHO05D005032 3.2e-111 406.0 350 65.4
SMO352G0043 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 8.7e-109 397.9 337 63.8
Nitab4.5_0005945g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 1.8e-106 390.2 373 66.5
Nitab4.5_0004572g0010 Nicotiana tabacum HOM05D004327 ORTHO05D005032 4.0e-106 389.0 374 67.4
TAR636G3612 Trochodendron aralioides HOM05D000809 ORTHO05D001196 9.0e-106 387.9 303 78.2
Pp3c12_10100 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.2e-102 377.5 365 58.4
MELO3C004022.2 Cucumis melo HOM05D004327 ORTHO05D005032 6.0e-102 375.2 296 70.9
FAN17G0468 Fragaria x ananassa HOM05D004327 ORTHO05D005032 1.0e-101 374.4 304 71.4
SMO137G0257 Selaginella moellendorffii HOM05D004327 ORTHO05D005032 5.1e-101 372.1 340 60.6
Lj9A24G29 Lonicera japonica HOM05D004327 ORTHO05D005032 1.1e-100 370.9 280 73.9
Actinidia38633 Actinidia chinensis HOM05D004327 ORTHO05D005032 2.1e-99 366.7 282 72.0
Pp3c5_23860 Physcomitrium patens HOM05D004327 ORTHO05D005032 3.1e-98 362.8 348 58.3
Mapoly0023s0050 Marchantia polymorpha HOM05D004327 ORTHO05D005032 2.5e-92 343.2 362 55.2
Pp3c3_22200 Physcomitrium patens HOM05D004327 ORTHO05D005032 5.7e-92 342.0 345 55.9
Duzib170G0255 Durio zibethinus HOM05D004327 ORTHO05D005032 1.4e-90 337.4 229 80.8
Actinidia27011 Actinidia chinensis HOM05D004327 ORTHO05D005032 5.3e-90 335.5 305 71.1
Pp3c16_10790 Physcomitrium patens HOM05D004327 ORTHO05D005032 2.0e-89 333.6 354 55.4
Haze_22092 Corylus avellana HOM05D004327 ORTHO05D005032 2.9e-88 329.7 244 73.4
Pp3c10_16450 Physcomitrium patens HOM05D004327 ORTHO05D005032 8.5e-88 328.2 321 56.4
CBR_g4121 Chara braunii HOM05D004327 ORTHO05D005032 4.2e-87 325.9 354 58.8
CBR_g34541 Chara braunii HOM05D004327 ORTHO05D005032 6.1e-86 322.0 368 51.6
Actinidia02748 Actinidia chinensis HOM05D004327 ORTHO05D005032 4.4e-84 315.8 235 76.2
AT2G18876 Arabidopsis thaliana HOM05D004327 ORTHO05D005032 1.3e-83 314.3 257 70.0
BcaB01g04461 Brassica carinata HOM05D004327 ORTHO05D005032 1.4e-77 294.3 297 60.6
BcaC01g06490 Brassica carinata HOM05D004327 ORTHO05D005032 1.2e-60 238.0 181 70.7
Oeu042171.1 Olea europaea HOM05D004327 ORTHO05D005032 1.9e-47 194.1 130 80.0
Aqoxy4G01695 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 1.2e-46 191.4 136 78.7
FAN17G0800 Fragaria x ananassa HOM05D004327 ORTHO05D005032 2.1e-38 164.1 129 68.2
Haze_22093 Corylus avellana HOM05D004327 ORTHO05D005032 2.0e-36 157.5 131 67.9
BcaC01g06489 Brassica carinata HOM05D004327 ORTHO05D005032 1.2e-33 148.3 118 73.7
Lj9A25T20 Lonicera japonica HOM05D004327 ORTHO05D005032 7.3e-31 139.0 97 74.2
SEGI_01506 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 1.4e-26 124.8 105 63.8
HanXRQChr08g0229701 Helianthus annuus HOM05D000502 ORTHO05D005032 6.6e-24 115.9 67 76.1
HanXRQChr09g0245491 Helianthus annuus HOM05D000502 ORTHO05D005032 6.6e-24 115.9 67 76.1
HanXRQChr13g0404041 Helianthus annuus HOM05D000502 ORTHO05D005032 9.5e-23 112.1 67 74.6
Pp3c26_7180 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.7e-19 101.3 78 57.7
SEGI_38031 Sequoiadendron giganteum HOM05D004327 ORTHO05D005032 7.1e-18 95.9 56 89.3
Aqoxy7G03035 Aquilegia oxysepala HOM05D004327 ORTHO05D005032 8.7e-16 89.0 141 44.7
CiPaw.01G111100 Carya illinoinensis HOM05D002292 ORTHO05D005032 1.1e-15 88.6 58 79.3
BraA02t05921Z Brassica rapa HOM05D004327 ORTHO05D005032 1.9e-15 87.8 90 58.9
BcaB05g22345 Brassica carinata HOM05D004327 ORTHO05D005032 1.1e-13 82.0 92 54.3
COL.COLO4_28287 Corchorus olitorius HOM05D004327 ORTHO05D005032 4.0e-13 80.1 54 75.9
Oeu003512.1 Olea europaea HOM05D004327 ORTHO05D005032 6.4e-11 72.8 43 86.0
Pp3c25_9090 Physcomitrium patens HOM05D004327 ORTHO05D005032 1.9e-10 71.2 108 45.4
C02p14250 Brassica napus HOM05D004327 ORTHO05D032179 5.4e-10 69.7 132 37.9
BolC9t54329H Brassica oleracea HOM05D004327 ORTHO05D005032 1.0e-08 65.5 57 64.9
Glyma.09G140000 Glycine max HOM05D004327 ORTHO05D005032 3.9e-08 63.5 57 54.4
BcaC03g14154 Brassica carinata HOM05D004327 ORTHO05D032179 8.7e-08 62.4 76 44.7
MCO09G810 Micromonas commoda HOM05D004327 ORTHO05D005032 3.6e-06 57.0 75 38.7
CiPaw.16G058000 Carya illinoinensis HOM05D002292 ORTHO05D003256 6.2e-06 56.2 38 73.7


User provided reference genes

Program Settings