Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 9.7e-209 729.9 378 100.0
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.1e-148 530.4 380 72.6
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.5e-148 530.0 380 72.1
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.5e-148 529.3 381 71.9
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 2.1e-147 526.2 378 70.9
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 2.2e-144 516.2 405 67.7
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 3.7e-144 515.4 380 68.7
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.1e-143 513.8 380 71.3
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.1e-142 509.6 378 68.5
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 2.7e-142 509.2 381 69.3
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.7e-142 509.2 378 69.8
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 3.5e-142 508.8 380 68.7
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 2.3e-141 506.1 379 68.3
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.5e-140 503.4 380 68.9
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.2e-139 500.4 380 68.4
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.6e-139 500.0 380 67.1
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 8.1e-139 497.7 380 67.9
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 1.1e-138 497.3 378 68.5
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 1.4e-138 496.9 379 68.1
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 3.1e-138 495.7 380 67.6
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 4.0e-138 495.4 379 68.3
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.0e-138 495.4 379 67.5
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 8.9e-138 494.2 380 67.4
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 1.5e-137 493.4 380 67.6
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.5e-137 493.4 378 68.8
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.0e-137 493.0 383 66.1
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 4.4e-137 491.9 381 67.5
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 4.4e-137 491.9 380 67.9
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 5.8e-137 491.5 381 67.2
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 7.6e-137 491.1 379 66.2
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 7.6e-137 491.1 437 61.8
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.7e-136 490.0 388 66.5
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.9e-136 489.2 380 67.1
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.9e-136 488.4 380 66.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 6.4e-136 488.0 380 65.3
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 2.4e-135 486.1 380 65.8
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 2.4e-135 486.1 381 66.9
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.4e-135 486.1 380 65.8
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 2.4e-135 486.1 385 64.9
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 2.4e-135 486.1 384 65.9
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 4.1e-135 485.3 380 65.5
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 5.4e-135 485.0 380 66.1
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 5.4e-135 485.0 381 65.6
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 7.1e-135 484.6 404 63.4
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.2e-134 483.8 410 62.7
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.2e-134 483.8 378 64.6
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 1.6e-134 483.4 400 64.8
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 2.7e-134 482.6 381 65.6
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 3.5e-134 482.3 381 65.4
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.3e-133 480.3 378 64.6
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 1.3e-133 480.3 378 64.0
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 1.3e-133 480.3 380 65.5
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-133 479.9 392 63.0
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 2.3e-133 479.6 378 64.6
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 2.3e-133 479.6 381 65.4
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 3.0e-133 479.2 384 65.4
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 5.1e-133 478.4 376 64.4
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 5.1e-133 478.4 381 65.1
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 8.6e-133 477.6 379 64.6
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.1e-132 477.2 380 65.0
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.9e-132 476.5 380 64.2
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 4.3e-132 475.3 379 64.4
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 5.6e-132 474.9 378 63.8
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 5.6e-132 474.9 380 65.8
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 7.3e-132 474.6 379 64.6
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 9.6e-132 474.2 378 64.0
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 9.6e-132 474.2 408 62.5
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 2.1e-131 473.0 435 59.3
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 2.8e-131 472.6 384 64.8
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 3.6e-131 472.2 378 63.2
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 4.7e-131 471.9 379 63.9
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 8.1e-131 471.1 385 64.7
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.1e-130 470.7 378 63.5
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.1e-130 470.7 433 61.0
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 2.4e-130 469.5 379 63.3
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 2.4e-130 469.5 379 63.3
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 4.0e-130 468.8 374 63.6
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 1.2e-129 467.2 381 63.8
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 3.4e-129 465.7 380 62.6
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 3.4e-129 465.7 378 64.6
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 7.6e-129 464.5 363 68.0
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.2e-128 463.0 379 62.8
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 1.4e-127 460.3 374 63.1
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 7.1e-127 458.0 355 66.2
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 7.1e-127 458.0 387 61.8
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 1.6e-126 456.8 396 60.4
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 1.7e-125 453.4 383 62.1
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 3.9e-125 452.2 383 61.9
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 4.3e-124 448.7 388 61.3
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 7.3e-124 448.0 413 58.1
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.1e-123 446.4 380 61.1
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 4.9e-120 435.3 331 67.7
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 2.3e-117 426.4 383 60.1
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.3e-117 426.4 379 58.0
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 3.0e-117 426.0 384 59.6
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 5.1e-117 425.2 460 51.5
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.4e-114 417.2 380 59.2
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.3e-112 410.6 323 64.1
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 3.5e-110 402.5 276 74.3
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 1.3e-109 400.6 385 55.8
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 4.3e-108 395.6 383 57.2
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 6.2e-107 391.7 383 56.1
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 1.4e-103 380.6 411 53.8
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.2e-102 377.5 388 55.4
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 4.6e-102 375.6 277 68.2
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 5.3e-74 282.3 244 60.2
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 7.2e-63 245.4 413 36.8
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.0e-56 224.9 456 33.6
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.5e-55 220.3 158 66.5
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 3.6e-54 216.5 167 63.5
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 6.1e-54 215.7 158 65.8
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 1.2e-46 191.4 339 37.2
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.3e-43 181.4 167 55.1
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.8e-41 172.2 147 60.5
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 2.5e-39 167.2 129 65.9
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 1.4e-37 161.4 140 55.7
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 5.8e-36 156.0 126 62.7
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 3.2e-34 150.2 109 71.6
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 9.2e-26 122.1 103 57.3
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 1.6e-25 121.3 85 68.2
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 4.3e-23 113.2 103 56.3
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.5e-20 104.8 95 54.7
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.2e-09 68.6 160 30.0
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 1.3e-08 65.1 39 76.9
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 1.7e-08 64.7 124 34.7
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 3.0e-08 63.9 39 74.4
Lj9A174G23 Lonicera japonica HOM05D002866 ORTHO05D234197 5.6e-07 59.7 116 37.1


User provided reference genes

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