Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 3.7e-107 391.7 227 100.0
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 1.1e-37 161.0 224 54.5
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 4.1e-37 159.1 234 50.9
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 2.2e-35 153.3 222 47.7
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 3.0e-32 142.9 246 45.9
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 8.0e-25 118.2 225 41.8
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 3.1e-21 106.3 221 39.4
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 7.0e-21 105.1 228 40.4
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 9.1e-21 104.8 238 37.4
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.6e-20 104.0 235 36.2
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 2.0e-20 103.6 239 37.7
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 5.9e-20 102.1 227 35.7
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 1.7e-19 100.5 250 37.6
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 2.3e-19 100.1 221 37.1
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 5.0e-19 99.0 219 35.2
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 3.3e-18 96.3 251 38.6
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 9.5e-18 94.7 169 41.4
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 9.5e-18 94.7 178 37.6
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 3.6e-17 92.8 236 35.6
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 6.1e-17 92.0 245 35.5
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 8.0e-17 91.7 256 37.9
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 1.4e-16 90.9 247 32.4
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.4e-16 90.9 177 39.0
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 1.8e-16 90.5 144 41.0
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 2.3e-16 90.1 154 39.6
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 3.0e-16 89.7 145 44.8
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 4.0e-16 89.4 148 39.2
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 4.0e-16 89.4 257 35.0
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 4.0e-16 89.4 177 38.4
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 5.2e-16 89.0 241 32.8
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.2e-15 87.8 176 39.2
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.5e-15 87.4 152 36.8
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 3.4e-15 86.3 69 58.0
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 3.4e-15 86.3 246 31.7
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 4.4e-15 85.9 190 37.9
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 4.4e-15 85.9 199 41.7
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 5.7e-15 85.5 152 35.5
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 5.7e-15 85.5 152 35.5
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 5.7e-15 85.5 160 45.0
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 5.7e-15 85.5 138 41.3
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 9.8e-15 84.7 187 34.8
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.3e-14 84.3 246 32.9
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 1.3e-14 84.3 210 33.8
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 1.7e-14 84.0 64 65.6
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.7e-14 84.0 244 36.9
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.2e-14 83.6 67 64.2
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.2e-14 83.6 77 58.4
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 2.2e-14 83.6 75 54.7
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 2.9e-14 83.2 248 32.7
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 4.9e-14 82.4 246 31.3
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 8.3e-14 81.6 63 60.3
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.1e-13 81.3 128 39.1
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 1.8e-13 80.5 72 58.3
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 1.8e-13 80.5 61 65.6
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 2.4e-13 80.1 59 69.5
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 2.4e-13 80.1 247 33.2
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 3.2e-13 79.7 229 34.1
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 4.1e-13 79.3 225 32.0
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 9.2e-13 78.2 265 30.2
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 1.2e-12 77.8 240 32.1
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.2e-12 77.8 213 34.3
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.2e-12 77.8 231 33.3
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 1.6e-12 77.4 225 31.1
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 2.0e-12 77.0 225 30.7
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.5e-12 76.3 163 33.1
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 4.6e-12 75.9 225 33.8
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 4.6e-12 75.9 183 31.7
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 5.9e-12 75.5 260 31.5
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 5.9e-12 75.5 224 31.7
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 1.0e-11 74.7 223 32.3
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 2.3e-11 73.6 242 31.0
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 5.0e-11 72.4 58 65.5
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 1.6e-09 67.4 75 52.0
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 3.6e-09 66.2 207 33.3
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 8.0e-09 65.1 77 45.5
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 1.0e-08 64.7 225 31.1
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.4e-08 64.3 70 52.9
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.4e-08 64.3 70 52.9
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.8e-08 63.9 194 33.0
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 4.0e-08 62.8 223 30.9
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 5.2e-08 62.4 226 32.7
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.2e-07 61.2 199 37.7
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.2e-07 61.2 75 45.3
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 2.0e-07 60.5 221 30.8
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 5.8e-07 58.9 225 28.9
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 9.8e-07 58.2 228 30.3
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 1.3e-06 57.8 187 30.5
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 1.7e-06 57.4 216 32.4


User provided reference genes

Program Settings