Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2588 Utricularia gibba HOM05D000786 ORTHO05D000779 1.4e-30 135.6 67 100.0
Actinidia15584 Actinidia chinensis HOM05D001250 ORTHO05D000627 2.0e-08 62.0 46 52.2
CSS0019123 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 3.4e-08 61.2 41 58.5
Cc03_g01160 Coffea canephora HOM05D000786 ORTHO05D000779 5.8e-08 60.5 66 40.9
Rhsim04G0232400 Rhododendron simsii HOM05D000786 ORTHO05D000779 1.7e-07 58.9 46 47.8
Carub.0005s2930 Capsella rubella HOM05D000786 ORTHO05D000779 2.2e-07 58.5 42 54.8
Migut.O00780 Erythranthe guttata HOM05D000786 ORTHO05D045293 2.2e-07 58.5 42 57.1
Migut.O00976 Erythranthe guttata HOM05D000786 ORTHO05D045293 2.2e-07 58.5 42 57.1
Eucgr.H01070 Eucalyptus grandis HOM05D000786 ORTHO05D000779 3.8e-07 57.8 41 58.5
GSVIVG01035043001 Vitis vinifera HOM05D000786 ORTHO05D000779 3.8e-07 57.8 41 58.5
BcaB02g08768 Brassica carinata HOM05D000786 ORTHO05D000779 1.4e-06 55.8 42 52.4
CARHR172910 Cardamine hirsuta HOM05D000786 ORTHO05D000779 1.4e-06 55.8 42 50.0
THA.LOC104817471 Tarenaya hassleriana HOM05D000786 ORTHO05D000779 1.4e-06 55.8 42 57.1
PGR119G0416 Punica granatum HOM05D000786 ORTHO05D000779 1.9e-06 55.5 41 53.7
Manes.03G201501 Manihot esculenta HOM05D000786 ORTHO05D000779 2.5e-06 55.1 42 47.6
Sopen06g022250 Solanum pennellii HOM05D000786 ORTHO05D000779 2.5e-06 55.1 41 48.8
SGA_v2.0_scaffold192G40624 Striga asiatica HOM05D000786 ORTHO05D000779 3.2e-06 54.7 41 46.3
vmacro02416 Vaccinium macrocarpon HOM05D000786 ORTHO05D000779 3.2e-06 54.7 41 53.7
vmacro03014 Vaccinium macrocarpon HOM05D000786 ORTHO05D000779 3.2e-06 54.7 41 53.7
AL6G22750 Arabidopsis lyrata HOM05D000786 ORTHO05D000779 4.2e-06 54.3 56 41.1
AT5G11970 Arabidopsis thaliana HOM05D000786 ORTHO05D000779 4.2e-06 54.3 56 41.1
MSTRG.21668 Avicennia marina HOM05D000786 ORTHO05D000779 4.2e-06 54.3 41 53.7
AL5G45390 Arabidopsis lyrata HOM05D000786 ORTHO05D000779 5.5e-06 53.9 42 50.0
C04p00400 Brassica napus HOM05D000786 ORTHO05D000779 5.5e-06 53.9 42 50.0
BolC4t21685H Brassica oleracea HOM05D000786 ORTHO05D000779 5.5e-06 53.9 42 50.0
CSS0020676 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 5.5e-06 53.9 41 46.3
Cpa.g.sc25.79 Carica papaya HOM05D000786 ORTHO05D000779 5.5e-06 53.9 43 44.2
DCAR_002871 Daucus carota HOM05D000786 ORTHO05D000779 5.5e-06 53.9 41 53.7
PGSC0003DMG400004908 Solanum tuberosum HOM05D000786 ORTHO05D000779 5.5e-06 53.9 41 46.3
PGSC0003DMG400004909 Solanum tuberosum HOM05D000786 ORTHO05D000779 5.5e-06 53.9 41 46.3
TWI12G0435 Tripterygium wilfordii HOM05D000786 ORTHO05D000779 5.5e-06 53.9 41 46.3
A05p00450 Brassica napus HOM05D000786 ORTHO05D000779 7.1e-06 53.5 42 50.0
BraA05t19043Z Brassica rapa HOM05D000786 ORTHO05D000779 7.1e-06 53.5 42 50.0
Cpa.g.sc9.97 Carica papaya HOM05D000786 ORTHO05D000779 7.1e-06 53.5 42 45.2
Duzib138G1722 Durio zibethinus HOM05D000786 ORTHO05D000779 7.1e-06 53.5 41 51.2
Migut.D00955 Erythranthe guttata HOM05D000786 ORTHO05D000779 7.1e-06 53.5 44 47.7
Peaxi162Scf00207g01313 Petunia axillaris HOM05D000786 ORTHO05D000779 7.1e-06 53.5 44 47.7
SGA_v2.0_scaffold376G50264 Striga asiatica HOM05D000786 ORTHO05D000779 7.1e-06 53.5 41 51.2
AT3G62640 Arabidopsis thaliana HOM05D000786 ORTHO05D000779 9.3e-06 53.1 42 50.0
CSS0023598 Camellia sinensis var. sinensis HOM05D000786 ORTHO05D000779 9.3e-06 53.1 41 51.2
Haze_25937 Corylus avellana HOM05D000786 ORTHO05D000779 9.3e-06 53.1 41 48.8
Eucgr.A02612 Eucalyptus grandis HOM05D000786 ORTHO05D000779 9.3e-06 53.1 48 43.8
Thhalv10001686m.g Eutrema salsugineum HOM05D000786 ORTHO05D000779 9.3e-06 53.1 42 47.6
Nn3g21623 Nelumbo nucifera HOM05D000786 ORTHO05D000779 9.3e-06 53.1 61 39.3
Nn8g38795 Nelumbo nucifera HOM05D000786 ORTHO05D000779 9.3e-06 53.1 44 45.5
Potri.010G140800 Populus trichocarpa HOM05D000786 ORTHO05D000779 9.3e-06 53.1 48 41.7


User provided reference genes

Program Settings