Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g257 Utricularia gibba HOM05D001122 ORTHO05D025317 1.9e-187 659.1 347 100.0
unitig_2.g29668 Utricularia gibba HOM05D001122 ORTHO05D025317 1.0e-34 151.8 235 46.4
unitig_747.g21402 Utricularia gibba HOM05D001122 ORTHO05D025317 1.0e-34 151.8 235 46.4
unitig_62.g23925 Utricularia gibba HOM05D001122 ORTHO05D025317 1.4e-23 114.8 247 38.9
Migut.F01261 Erythranthe guttata HOM05D001122 ORTHO05D001877 3.7e-21 106.7 221 38.5
Migut.F00587 Erythranthe guttata HOM05D001122 ORTHO05D025317 1.8e-20 104.4 172 40.1
PGSC0003DMG400029079 Solanum tuberosum HOM05D001122 ORTHO05D001877 1.3e-18 98.2 250 36.0
MSTRG.8901 Avicennia marina HOM05D001122 ORTHO05D001877 3.8e-18 96.7 251 35.9
Nitab4.5_0002713g0010 Nicotiana tabacum HOM05D001122 ORTHO05D001877 5.0e-18 96.3 265 35.1
Hma1.2p1_1240F.1_g269540 Hydrangea macrophylla HOM05D001122 ORTHO05D001877 4.2e-17 93.2 217 36.9
Oeu054430.1 Olea europaea HOM05D001122 ORTHO05D001877 4.2e-17 93.2 191 38.2
Oeu054431.1 Olea europaea HOM05D001122 ORTHO05D001877 7.2e-17 92.4 234 34.2
CAN.G111.30 Capsicum annuum HOM05D001122 ORTHO05D001877 1.2e-16 91.7 240 35.0
Solyc06g050350.3 Solanum lycopersicum HOM05D001122 ORTHO05D001877 1.2e-16 91.7 224 36.6
Sopen06g015840 Solanum pennellii HOM05D001122 ORTHO05D001877 1.2e-16 91.7 224 36.2
SGA_v2.0_scaffold60G20914 Striga asiatica HOM05D001122 ORTHO05D001877 1.2e-16 91.7 259 33.6
Lj1A965T41 Lonicera japonica HOM05D001122 ORTHO05D001877 4.7e-16 89.7 266 32.0
Nitab4.5_0000263g0240 Nicotiana tabacum HOM05D001122 ORTHO05D001877 4.7e-16 89.7 246 33.7
Peaxi162Scf00464g00002 Petunia axillaris HOM05D001122 ORTHO05D001877 1.8e-15 87.8 221 34.8
Oeu058655.1 Olea europaea HOM05D001122 ORTHO05D001877 3.9e-15 86.7 238 35.3
Cc02_g05600 Coffea canephora HOM05D001122 ORTHO05D001877 5.7e-14 82.8 318 28.6
HanXRQChr09g0251501 Helianthus annuus HOM05D001122 ORTHO05D001877 2.2e-13 80.9 208 35.1
HanXRQChr15g0493811 Helianthus annuus HOM05D001122 ORTHO05D001877 6.3e-13 79.3 212 33.5
unitig_46.g18742 Utricularia gibba HOM05D001122 ORTHO05D001877 1.1e-12 78.6 232 30.2
Dinv10548 Davidia involucrata HOM05D001122 ORTHO05D001877 1.4e-12 78.2 243 30.9
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 1.8e-12 77.8 205 33.2
Dinv21822 Davidia involucrata HOM05D001122 ORTHO05D001877 2.0e-11 74.3 253 30.8
Lsat_1_v5_gn_9_59180 Lactuca sativa HOM05D001122 ORTHO05D001877 3.5e-11 73.6 215 32.6
Actinidia29745 Actinidia chinensis HOM05D001122 ORTHO05D001877 1.0e-10 72.0 217 31.8
CSS0014462 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 1.7e-10 71.2 234 29.9
GSVIVG01032713001 Vitis vinifera HOM05D001122 ORTHO05D001877 2.9e-10 70.5 215 30.7
A09p44840 Brassica napus HOM05D001122 ORTHO05D001877 6.5e-10 69.3 175 34.9
CSS0020386 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 6.5e-10 69.3 254 29.1
CSS0026092 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 6.5e-10 69.3 234 30.3
MSTRG.27279 Avicennia marina HOM05D001122 ORTHO05D001877 1.9e-09 67.8 211 32.2
Thhalv10010401m.g Eutrema salsugineum HOM05D001122 ORTHO05D001877 1.9e-09 67.8 193 31.6
AT3G51720 Arabidopsis thaliana HOM05D001122 ORTHO05D001877 3.2e-09 67.0 194 29.4
BraA09t39946Z Brassica rapa HOM05D001122 ORTHO05D001877 4.2e-09 66.6 175 34.3
BcaB01g00426 Brassica carinata HOM05D001122 ORTHO05D001877 1.2e-08 65.1 192 32.8
BraA03t11360Z Brassica rapa HOM05D001122 ORTHO05D001877 1.2e-08 65.1 224 31.7
Carub.0005s1806 Capsella rubella HOM05D001122 ORTHO05D001877 1.6e-08 64.7 183 32.8
BcaB01g00493 Brassica carinata HOM05D001122 ORTHO05D001877 3.6e-08 63.5 178 33.1
BolC8t50306H Brassica oleracea HOM05D001122 ORTHO05D001877 3.6e-08 63.5 178 33.1
Rhsim03G0150400 Rhododendron simsii HOM05D001122 ORTHO05D001877 4.7e-08 63.2 337 25.8
A03p21230 Brassica napus HOM05D001122 ORTHO05D001877 6.1e-08 62.8 224 31.2
C08p26890 Brassica napus HOM05D001122 ORTHO05D001877 8.0e-08 62.4 178 33.1
CSS0044199 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 8.0e-08 62.4 264 27.7
THA.LOC104806079 Tarenaya hassleriana HOM05D001122 ORTHO05D001877 8.0e-08 62.4 217 30.9
Actinidia29048 Actinidia chinensis HOM05D001122 ORTHO05D001877 1.8e-07 61.2 243 28.8
BcaB01g00491 Brassica carinata HOM05D001122 ORTHO05D001877 2.3e-07 60.8 171 32.2
CSS0030369 Camellia sinensis var. sinensis HOM05D001122 ORTHO05D001877 2.3e-07 60.8 239 29.7
CARHR135600 Cardamine hirsuta HOM05D001122 ORTHO05D001877 2.3e-07 60.8 228 28.9
Thhalv10016492m.g Eutrema salsugineum HOM05D001122 ORTHO05D001877 2.3e-07 60.8 236 26.3
Manes.10G005500 Manihot esculenta HOM05D001122 ORTHO05D001877 2.3e-07 60.8 240 28.3
Glyma.03G037500 Glycine max HOM05D001122 ORTHO05D001877 4.0e-07 60.1 265 26.4
Manes.07G138300 Manihot esculenta HOM05D001122 ORTHO05D001877 5.2e-07 59.7 240 28.8
Migut.J00063 Erythranthe guttata HOM05D001122 ORTHO05D001877 6.7e-07 59.3 239 28.0
HanXRQChr10g0298251 Helianthus annuus HOM05D001122 ORTHO05D001877 6.7e-07 59.3 249 26.1
Sp4g20690 Schrenkiella parvula HOM05D001122 ORTHO05D001877 6.7e-07 59.3 243 27.2
Sc10g0002870 Simmondsia chinensis HOM05D001122 ORTHO05D001877 6.7e-07 59.3 370 25.7
CARHR161330 Cardamine hirsuta HOM05D001122 ORTHO05D001877 8.8e-07 58.9 177 31.1
Glyma.01G131300 Glycine max HOM05D001122 ORTHO05D001877 1.5e-06 58.2 261 25.7
Cfa017062 Carpinus fangiana HOM05D001122 ORTHO05D001877 2.0e-06 57.8 269 26.8
Atru.chr8.2373 Acer truncatum HOM05D001122 ORTHO05D001877 2.6e-06 57.4 267 27.7
Cpa.g.sc86.25 Carica papaya HOM05D001122 ORTHO05D001877 3.3e-06 57.0 209 28.7
MBI15_g27352_MAGBIO Magnolia biondii HOM05D001122 ORTHO05D001877 3.3e-06 57.0 271 25.5
Os03g0339700 Oryza sativa ssp. japonica HOM05D001122 ORTHO05D001877 3.3e-06 57.0 242 28.5
Actinidia11525 Actinidia chinensis HOM05D001122 ORTHO05D001877 5.7e-06 56.2 267 25.8
Nn2g11099 Nelumbo nucifera HOM05D001122 ORTHO05D001877 7.5e-06 55.8 264 25.0
Rhsim05G0228900 Rhododendron simsii HOM05D001122 ORTHO05D001877 7.5e-06 55.8 243 28.0
TAR636G1426 Trochodendron aralioides HOM05D001122 ORTHO05D001877 9.7e-06 55.5 265 26.4


User provided reference genes

Program Settings