Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 2.1e-91 339.0 168 100.0
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 1.7e-51 206.5 162 60.5
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 2.0e-49 199.5 158 61.4
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 2.2e-48 196.1 158 58.9
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.9e-47 193.0 131 68.7
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 6.1e-46 188.0 141 63.1
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 1.0e-45 187.2 138 63.0
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 1.4e-45 186.8 141 62.4
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 3.0e-45 185.7 160 57.5
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 5.1e-45 184.9 128 65.6
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 1.1e-44 183.7 163 57.1
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 1.1e-44 183.7 135 64.4
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 1.1e-44 183.7 142 61.3
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.5e-44 183.3 148 61.5
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 1.5e-44 183.3 148 61.5
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 2.0e-44 183.0 164 56.1
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 2.6e-44 182.6 153 59.5
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 3.3e-44 182.2 147 59.9
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 9.7e-44 180.6 148 58.8
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.7e-43 179.9 162 56.8
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 2.8e-43 179.1 153 56.9
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 3.7e-43 178.7 160 57.5
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 3.7e-43 178.7 139 59.7
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 3.7e-43 178.7 152 58.6
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 4.8e-43 178.3 147 57.8
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 4.8e-43 178.3 168 56.0
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 4.8e-43 178.3 160 58.1
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 8.2e-43 177.6 152 57.9
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 1.1e-42 177.2 139 59.7
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 1.4e-42 176.8 159 58.5
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 1.8e-42 176.4 139 62.6
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.8e-42 176.4 155 54.8
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 5.3e-42 174.9 142 59.2
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 7.0e-42 174.5 139 63.3
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 7.0e-42 174.5 158 57.0
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 7.0e-42 174.5 130 61.5
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 9.1e-42 174.1 156 57.1
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 1.2e-41 173.7 144 59.0
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.6e-41 173.3 138 59.4
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 2.0e-41 172.9 130 66.2
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 2.0e-41 172.9 128 64.8
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 2.6e-41 172.6 157 57.3
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 3.5e-41 172.2 135 58.5
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 4.5e-41 171.8 139 59.7
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 4.5e-41 171.8 155 56.1
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 5.9e-41 171.4 136 63.2
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 5.9e-41 171.4 157 55.4
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 7.7e-41 171.0 134 62.7
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 1.0e-40 170.6 141 60.3
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 1.7e-40 169.9 141 59.6
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 3.8e-40 168.7 141 58.2
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 3.8e-40 168.7 157 54.8
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 5.0e-40 168.3 125 64.8
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 5.0e-40 168.3 141 58.2
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 6.5e-40 167.9 160 56.9
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 6.5e-40 167.9 135 62.2
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 8.5e-40 167.5 162 53.1
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 8.5e-40 167.5 136 60.3
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 8.5e-40 167.5 131 64.9
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.1e-39 167.2 140 55.7
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 1.5e-39 166.8 135 63.0
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 1.9e-39 166.4 133 64.7
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 1.9e-39 166.4 158 51.3
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 1.9e-39 166.4 157 54.1
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 1.9e-39 166.4 142 57.0
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 4.2e-39 165.2 141 58.2
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 4.2e-39 165.2 130 60.0
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 5.5e-39 164.9 119 65.5
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 1.2e-38 163.7 141 59.6
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 1.6e-38 163.3 136 59.6
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 4.7e-38 161.8 145 54.5
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 6.1e-38 161.4 134 59.0
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 8.0e-38 161.0 116 67.2
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 8.0e-38 161.0 133 57.1
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 8.0e-38 161.0 141 58.9
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.0e-37 160.6 134 59.7
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 1.0e-37 160.6 136 60.3
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 1.0e-37 160.6 157 54.8
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 1.4e-37 160.2 137 56.2
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 2.3e-37 159.5 157 55.4
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 2.3e-37 159.5 122 62.3
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 6.7e-37 157.9 141 52.5
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 1.1e-36 157.1 136 58.8
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 1.1e-36 157.1 141 56.0
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 1.5e-36 156.8 142 53.5
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 1.5e-36 156.8 137 54.7
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 2.6e-36 156.0 159 52.2
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 5.7e-36 154.8 157 52.2
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 7.5e-36 154.5 137 54.0
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 9.7e-36 154.1 157 51.6
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.3e-35 153.7 136 61.0
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 2.2e-35 152.9 114 61.4
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 4.8e-35 151.8 120 62.5
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 4.1e-34 148.7 155 51.0
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 5.3e-34 148.3 154 51.9
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 5.3e-34 148.3 154 51.9
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 5.3e-34 148.3 154 51.9
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 7.0e-34 147.9 137 56.9
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 7.7e-33 144.4 133 57.9
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 1.1e-31 140.6 137 53.3
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 7.2e-31 137.9 133 52.6
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.2e-30 137.1 146 51.4
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 1.6e-30 136.7 117 59.8
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 4.7e-30 135.2 117 59.8
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 1.8e-29 133.3 163 45.4
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 8.8e-29 131.0 118 57.6
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 1.2e-28 130.6 123 56.9
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 2.6e-28 129.4 117 56.4
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 3.7e-27 125.6 162 42.6
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 4.1e-26 122.1 141 47.5
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 5.9e-25 118.2 122 54.1
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 7.7e-25 117.9 109 51.4
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 5.0e-24 115.2 134 49.3
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 5.0e-24 115.2 134 49.3
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 8.5e-24 114.4 109 51.4
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 1.5e-23 113.6 94 59.6
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 2.7e-22 109.4 131 45.8
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 2.7e-22 109.4 85 55.3
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 4.7e-22 108.6 161 40.4
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 1.8e-21 106.7 95 57.9
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 1.5e-20 103.6 114 49.1
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 6.3e-19 98.2 145 40.7
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 1.6e-17 93.6 109 48.6
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 6.6e-16 88.2 86 55.8
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 1.5e-12 77.0 71 54.9
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 1.7e-11 73.6 73 49.3
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 1.7e-11 73.6 44 75.0
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 1.4e-10 70.5 108 40.7
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.4e-10 70.5 48 66.7
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-08 63.9 111 33.3
SEGI_03586 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 1.7e-08 63.5 76 48.7
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 5.0e-08 62.0 94 42.6
BcaC05g25998 Brassica carinata HOM05D005768 ORTHO05D007100 9.5e-07 57.8 62 45.2


User provided reference genes

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