Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 5.0e-50 200.7 93 100.0
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 1.7e-34 149.1 93 76.3
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 1.7e-29 132.5 92 63.0
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 4.1e-28 127.9 92 62.0
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 1.0e-26 123.2 75 68.0
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 1.0e-26 123.2 75 68.0
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 1.0e-26 123.2 75 68.0
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 1.1e-25 119.8 78 62.8
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 4.3e-25 117.9 75 68.0
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 5.6e-25 117.5 78 61.5
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 1.2e-24 116.3 76 64.5
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 2.1e-24 115.5 78 61.5
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 2.8e-24 115.2 78 60.3
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 3.6e-24 114.8 93 54.8
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 1.4e-23 112.8 92 57.6
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 1.4e-23 112.8 90 56.7
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 2.3e-23 112.1 88 56.8
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 3.1e-23 111.7 88 56.8
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 3.1e-23 111.7 88 56.8
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 5.2e-23 110.9 91 51.6
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 8.9e-23 110.2 92 56.5
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 1.2e-22 109.8 84 57.1
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.2e-22 109.8 91 53.8
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.5e-22 109.4 74 58.1
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 2.0e-22 109.0 75 58.7
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 2.6e-22 108.6 76 60.5
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 3.4e-22 108.2 77 59.7
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 4.4e-22 107.8 76 60.5
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 4.4e-22 107.8 76 60.5
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 5.8e-22 107.5 78 60.3
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 7.6e-22 107.1 84 54.8
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 9.9e-22 106.7 84 56.0
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 9.9e-22 106.7 76 59.2
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 1.7e-21 105.9 76 60.5
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 1.7e-21 105.9 73 64.4
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 1.7e-21 105.9 92 48.9
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 3.7e-21 104.8 78 57.7
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 3.7e-21 104.8 80 56.2
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 3.7e-21 104.8 80 56.2
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 3.7e-21 104.8 78 56.4
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 3.7e-21 104.8 67 62.7
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 3.7e-21 104.8 74 59.5
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 4.9e-21 104.4 90 51.1
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 4.9e-21 104.4 74 60.8
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 4.9e-21 104.4 74 60.8
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 6.4e-21 104.0 75 60.0
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 6.4e-21 104.0 79 57.0
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 8.4e-21 103.6 80 56.2
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 8.4e-21 103.6 70 62.9
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 1.1e-20 103.2 74 55.4
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 1.1e-20 103.2 78 55.1
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 1.1e-20 103.2 74 59.5
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 1.4e-20 102.8 94 51.1
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.4e-20 102.8 78 56.4
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.4e-20 102.8 74 59.5
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 1.9e-20 102.4 92 51.1
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 1.9e-20 102.4 73 60.3
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 1.9e-20 102.4 71 57.7
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.9e-20 102.4 73 61.6
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.2e-20 101.7 77 54.5
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 3.2e-20 101.7 78 55.1
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 4.1e-20 101.3 78 59.0
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 5.4e-20 100.9 73 58.9
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 7.1e-20 100.5 90 48.9
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 7.1e-20 100.5 78 55.1
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 9.2e-20 100.1 85 54.1
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 2.1e-19 99.0 78 53.8
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 2.1e-19 99.0 78 53.8
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 2.1e-19 99.0 78 53.8
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 2.7e-19 98.6 73 57.5
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 3.5e-19 98.2 92 50.0
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 1.0e-18 96.7 59 64.4
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 1.0e-18 96.7 59 64.4
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 1.3e-18 96.3 60 61.7
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 1.7e-18 95.9 78 55.1
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 3.9e-18 94.7 78 53.8
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 6.6e-18 94.0 81 51.9
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.1e-17 93.2 79 49.4
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 1.5e-17 92.8 78 52.6
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 1.5e-17 92.8 78 52.6
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 1.5e-17 92.8 78 52.6
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 2.5e-17 92.0 61 63.9
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 4.3e-17 91.3 70 54.3
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 9.6e-17 90.1 71 52.1
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 2.1e-16 89.0 73 50.7
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 2.8e-16 88.6 70 51.4
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 2.8e-16 88.6 86 47.7
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 6.2e-16 87.4 62 53.2
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 1.8e-15 85.9 59 59.3
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 2.4e-15 85.5 58 55.2
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 8.9e-15 83.6 63 50.8
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 1.2e-14 83.2 54 59.3
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 2.0e-14 82.4 60 55.0
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 1.3e-13 79.7 53 58.5
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 3.8e-13 78.2 95 41.1
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 8.4e-13 77.0 57 49.1
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 8.4e-13 77.0 95 41.1
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.1e-12 76.6 61 45.9
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 2.4e-12 75.5 50 60.0
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 2.4e-12 75.5 54 51.9
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 2.4e-12 75.5 54 51.9
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 3.9e-10 68.2 39 74.4
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 8.7e-10 67.0 44 54.5
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 4.3e-09 64.7 67 41.8
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 1.6e-08 62.8 42 54.8
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 3.1e-07 58.5 41 53.7
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 1.2e-06 56.6 58 36.2


User provided reference genes

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