Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2509 Utricularia gibba HOM05D005379 ORTHO05D006661 1.0e-139 500.0 242 100.0
MSTRG.8845 Avicennia marina HOM05D005379 ORTHO05D006661 8.2e-52 208.0 134 73.1
Migut.F00521 Erythranthe guttata HOM05D005379 ORTHO05D006661 1.1e-51 207.6 133 75.2
SalBow5G2200 Salvia bowleyana HOM05D005379 ORTHO05D006661 3.1e-51 206.1 144 70.1
CAN.G174.21 Capsicum annuum HOM05D005379 ORTHO05D006661 6.9e-51 204.9 126 79.4
Nitab4.5_0010756g0010 Nicotiana tabacum HOM05D005379 ORTHO05D006661 1.2e-50 204.1 133 75.2
vmacro06833 Vaccinium macrocarpon HOM05D005379 ORTHO05D006661 2.6e-50 203.0 160 63.1
Nitab4.5_0002211g0080 Nicotiana tabacum HOM05D005379 ORTHO05D006661 1.0e-49 201.1 131 76.3
SalBow7G1847 Salvia bowleyana HOM05D005379 ORTHO05D006661 2.9e-49 199.5 117 80.3
SalBow7G3941 Salvia bowleyana HOM05D005379 ORTHO05D006661 2.9e-49 199.5 117 80.3
Solyc06g034100.4 Solanum lycopersicum HOM05D005379 ORTHO05D006661 2.9e-49 199.5 137 71.5
Sopen06g010750 Solanum pennellii HOM05D005379 ORTHO05D006661 2.9e-49 199.5 137 71.5
Nitab4.5_0000262g0030 Nicotiana tabacum HOM05D005379 ORTHO05D006661 6.5e-49 198.4 120 80.8
Nitab4.5_0000448g0020 Nicotiana tabacum HOM05D005379 ORTHO05D006661 1.4e-48 197.2 120 80.0
Lj1A584T32 Lonicera japonica HOM05D005379 ORTHO05D006661 7.2e-48 194.9 121 79.3
Oeu042535.3 Olea europaea HOM05D005379 ORTHO05D006661 7.2e-48 194.9 119 79.8
Oeu022464.1 Olea europaea HOM05D005379 ORTHO05D006661 1.2e-47 194.1 150 65.3
Manes.14G038300 Manihot esculenta HOM05D005379 ORTHO05D006661 2.7e-47 193.0 137 69.3
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 2.7e-47 193.0 126 76.2
Ciclev10005581m.g Citrus clementina HOM05D005379 ORTHO05D006661 7.9e-47 191.4 137 69.3
AUR62002241 Chenopodium quinoa HOM05D005379 ORTHO05D006661 1.0e-46 191.0 137 67.9
CiPaw.08G041400 Carya illinoinensis HOM05D005379 ORTHO05D006661 1.4e-46 190.7 119 79.0
AUR62015453 Chenopodium quinoa HOM05D005379 ORTHO05D006661 3.0e-46 189.5 137 67.2
Sabra03G0109800 Salix brachista HOM05D005379 ORTHO05D006661 8.8e-46 188.0 119 77.3
Sc18g0007310 Simmondsia chinensis HOM05D005379 ORTHO05D006661 1.5e-45 187.2 137 67.9
EL10Ac3g05878 Beta vulgaris HOM05D005379 ORTHO05D006661 2.0e-45 186.8 137 67.9
MD07G1249400 Malus domestica HOM05D005379 ORTHO05D006661 2.0e-45 186.8 112 80.4
TAR374G0427 Trochodendron aralioides HOM05D005379 ORTHO05D006661 2.0e-45 186.8 134 69.4
Eucgr.K00130 Eucalyptus grandis HOM05D005379 ORTHO05D006661 2.5e-45 186.4 138 66.7
Potri.003G151600 Populus trichocarpa HOM05D005379 ORTHO05D006661 2.5e-45 186.4 137 67.9
Prupe.2G273100 Prunus persica HOM05D005379 ORTHO05D006661 2.5e-45 186.4 119 74.8
Dinv06588 Davidia involucrata HOM05D005379 ORTHO05D006661 3.3e-45 186.0 136 69.9
Thecc.03G149400 Theobroma cacao HOM05D005379 ORTHO05D006661 3.3e-45 186.0 119 76.5
VMungo0540G0153 Vigna mungo HOM05D005379 ORTHO05D006661 3.3e-45 186.0 118 78.8
Actinidia31671 Actinidia chinensis HOM05D005379 ORTHO05D006661 4.3e-45 185.7 111 80.2
CANSAT56G0595 Cannabis sativa HOM05D005379 ORTHO05D006661 4.3e-45 185.7 105 84.8
CANSAT56G1299 Cannabis sativa HOM05D005379 ORTHO05D006661 4.3e-45 185.7 105 84.8
MD01G1177600 Malus domestica HOM05D005379 ORTHO05D006661 4.3e-45 185.7 112 79.5
Actinidia31774 Actinidia chinensis HOM05D005379 ORTHO05D006661 5.7e-45 185.3 137 66.4
CSS0027857 Camellia sinensis var. sinensis HOM05D005379 ORTHO05D006661 5.7e-45 185.3 137 66.4
Rhsim03G0161700 Rhododendron simsii HOM05D005379 ORTHO05D006661 5.7e-45 185.3 120 74.2
Lalb_Chr05g0217631 Lupinus albus HOM05D005379 ORTHO05D006661 1.3e-44 184.1 119 76.5
TAR375G0328 Trochodendron aralioides HOM05D005379 ORTHO05D006661 1.3e-44 184.1 137 66.4
Glyma.08G176800 Glycine max HOM05D005379 ORTHO05D006661 2.2e-44 183.3 107 84.1
QL09p028045 Quercus lobata HOM05D005379 ORTHO05D006661 2.2e-44 183.3 119 75.6
Phvul.006G202400 Phaseolus vulgaris HOM05D005379 ORTHO05D006661 2.8e-44 183.0 107 83.2
SGA_v2.0_scaffold60G20811 Striga asiatica HOM05D005379 ORTHO05D006661 2.8e-44 183.0 95 91.6
Glyma.15G056200 Glycine max HOM05D005379 ORTHO05D006661 3.7e-44 182.6 107 83.2
THA.LOC104811535 Tarenaya hassleriana HOM05D005379 ORTHO05D006661 3.7e-44 182.6 157 61.1
GSVIVG01013977001 Vitis vinifera HOM05D005379 ORTHO05D006661 3.7e-44 182.6 118 74.6
MBI04_g36330_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 4.8e-44 182.2 120 76.7
PGR004G0100 Punica granatum HOM05D005379 ORTHO05D006661 4.8e-44 182.2 142 66.2
TWI23G1062 Tripterygium wilfordii HOM05D005379 ORTHO05D006661 4.8e-44 182.2 119 75.6
Cfa013572 Carpinus fangiana HOM05D005379 ORTHO05D006661 6.3e-44 181.8 119 74.8
ATR0057G081 Amborella trichopoda HOM05D005379 ORTHO05D006661 8.2e-44 181.4 119 73.9
PSO782G5074 Papaver somniferum HOM05D005379 ORTHO05D006661 8.2e-44 181.4 105 81.9
Gohir.D07G047600 Gossypium hirsutum HOM05D005379 ORTHO05D006661 1.1e-43 181.0 137 67.2
Gorai.001G050800 Gossypium raimondii HOM05D005379 ORTHO05D006661 1.1e-43 181.0 137 67.2
Hund11852 Selenicereus undatus HOM05D005379 ORTHO05D006661 1.1e-43 181.0 117 75.2
Gohir.A07G043200 Gossypium hirsutum HOM05D005379 ORTHO05D006661 1.8e-43 180.3 137 66.4
PSO063G0621 Papaver somniferum HOM05D005379 ORTHO05D006661 1.8e-43 180.3 105 81.0
MBI04_g38758_MAGBIO Magnolia biondii HOM05D005379 ORTHO05D006661 2.4e-43 179.9 120 76.7
Lsat_1_v5_gn_8_9541 Lactuca sativa HOM05D005379 ORTHO05D006661 4.1e-43 179.1 117 73.5
Sed0000219 Sechium edule HOM05D005379 ORTHO05D006661 4.1e-43 179.1 117 76.1
Hund04565 Selenicereus undatus HOM05D005379 ORTHO05D006661 4.1e-43 179.1 138 65.9
Ah.13g071160 Amaranthus hybridus HOM05D005379 ORTHO05D006661 5.3e-43 178.7 110 76.4
RcHm_v2.0_Chr1g0373791 Rosa chinensis HOM05D005379 ORTHO05D006661 6.9e-43 178.3 119 70.6
Ca_00152_v3 Cicer arietinum L. HOM05D005379 ORTHO05D006661 9.1e-43 177.9 117 76.9
CsaV3_6G041840 Cucumis sativus L. HOM05D005379 ORTHO05D006661 9.1e-43 177.9 107 79.4
ECA238G1883 Erigeron canadensis HOM05D005379 ORTHO05D006661 9.1e-43 177.9 117 73.5
FAN10G0849 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.2e-42 177.6 119 69.7
Os07g0490300 Oryza sativa ssp. japonica HOM05D005379 ORTHO05D006661 1.2e-42 177.6 119 73.9
Aa31LG3G7760 Aethionema arabicum HOM05D005379 ORTHO05D006661 2.0e-42 176.8 135 65.9
FvH4_7g27000 Fragaria vesca HOM05D005379 ORTHO05D006661 2.0e-42 176.8 137 62.0
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.0e-42 176.8 119 69.7
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 2.0e-42 176.8 119 69.7
ClCG01G015600 Citrullus lanatus HOM05D005379 ORTHO05D006661 2.6e-42 176.4 105 80.0
CDE11G0172 Ceratophyllum demersum HOM05D005379 ORTHO05D006661 3.4e-42 176.0 137 63.5
MELO3C008037.2 Cucumis melo HOM05D005379 ORTHO05D006661 3.4e-42 176.0 107 77.6
HanXRQChr08g0222701 Helianthus annuus HOM05D005379 ORTHO05D006661 3.4e-42 176.0 117 70.9
FAN03G3283 Fragaria x ananassa HOM05D005379 ORTHO05D006661 5.9e-42 175.3 121 67.8
HanXRQChr07g0205531 Helianthus annuus HOM05D005379 ORTHO05D006661 5.9e-42 175.3 117 73.5
Peaxi162Scf00167g00730 Petunia axillaris HOM05D005379 ORTHO05D006661 5.9e-42 175.3 98 87.8
Zm00001eb321690 Zea mays HOM05D005379 ORTHO05D006661 5.9e-42 175.3 117 75.2
Lj3g0027387 Lotus japonicus HOM05D005379 ORTHO05D006661 1.0e-41 174.5 140 62.9
Psat1g214640 Pisum sativum HOM05D005379 ORTHO05D006661 1.3e-41 174.1 119 73.1
AL8G25500 Arabidopsis lyrata HOM05D005379 ORTHO05D006661 1.7e-41 173.7 119 71.4
Carub.0008s1126 Capsella rubella HOM05D005379 ORTHO05D006661 5.0e-41 172.2 118 71.2
Medtr2g009320 Medicago truncatula HOM05D005379 ORTHO05D006661 5.0e-41 172.2 119 72.3
TPR.G9516 Trifolium pratense HOM05D005379 ORTHO05D006661 5.0e-41 172.2 119 72.3
Peaxi162Scf00304g01113 Petunia axillaris HOM05D005379 ORTHO05D006661 6.5e-41 171.8 98 84.7
AT5G51220 Arabidopsis thaliana HOM05D005379 ORTHO05D006661 8.5e-41 171.4 119 69.7
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 8.5e-41 171.4 117 69.2
Cc02_g04670 Coffea canephora HOM05D005379 ORTHO05D006661 1.1e-40 171.0 140 64.3
HanXRQChr05g0139501 Helianthus annuus HOM05D005379 ORTHO05D006661 2.5e-40 169.9 116 69.0
Thhalv10014342m.g Eutrema salsugineum HOM05D005379 ORTHO05D006661 3.2e-40 169.5 119 69.7
Sp6g13420 Schrenkiella parvula HOM05D005379 ORTHO05D006661 7.2e-40 168.3 119 68.1
CARHR256800 Cardamine hirsuta HOM05D005379 ORTHO05D006661 9.4e-40 167.9 118 68.6
Haze_22191 Corylus avellana HOM05D005379 ORTHO05D006661 1.2e-39 167.5 102 79.4
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 2.1e-39 166.8 98 81.6
Zm00001eb105230 Zea mays HOM05D005379 ORTHO05D006661 2.1e-39 166.8 126 66.7
BcaB08g35480 Brassica carinata HOM05D005379 ORTHO05D006661 4.7e-39 165.6 119 67.2
A10p07900 Brassica napus HOM05D005379 ORTHO05D006661 4.7e-39 165.6 119 66.4
BraSC35t46008Z Brassica rapa HOM05D005379 ORTHO05D006661 4.7e-39 165.6 119 66.4
arahy.Tifrunner.gnm1.ann1.3L844V Arachis hypogaea HOM05D005379 ORTHO05D006661 1.0e-38 164.5 97 81.4
BcaC04g20721 Brassica carinata HOM05D005379 ORTHO05D006661 3.0e-38 162.9 119 66.4
C09p39890 Brassica napus HOM05D005379 ORTHO05D006661 3.0e-38 162.9 119 66.4
BolC9t56888H Brassica oleracea HOM05D005379 ORTHO05D006661 3.0e-38 162.9 119 66.4
Cpa.g.sc13.263 Carica papaya HOM05D005379 ORTHO05D006661 1.1e-37 161.0 83 91.6
arahy.Tifrunner.gnm1.ann1.8RST7H Arachis hypogaea HOM05D005379 ORTHO05D006661 2.6e-37 159.8 83 90.4
CANSAT56G1775 Cannabis sativa HOM05D005379 ORTHO05D006661 5.3e-35 152.1 87 81.6
Hma1.2p1_0456F.1_g156820 Hydrangea macrophylla HOM05D005379 ORTHO05D006661 5.3e-35 152.1 131 62.6
DCAR_018078 Daucus carota HOM05D005379 ORTHO05D006661 7.0e-35 151.8 107 68.2
CANSAT56G1106 Cannabis sativa HOM05D005379 ORTHO05D006661 5.9e-34 148.7 87 81.6
BcaB05g24017 Brassica carinata HOM05D005379 ORTHO05D006661 1.3e-33 147.5 114 64.0
AagrBONN_evm.TU.Sc2ySwM_228.472 Anthoceros agrestis HOM05D005379 ORTHO05D006661 3.3e-29 132.9 121 50.4
Pp3c8_7310 Physcomitrium patens HOM05D005379 ORTHO05D006661 6.3e-28 128.6 103 55.3
Mapoly0029s0089 Marchantia polymorpha HOM05D005379 ORTHO05D006661 1.1e-27 127.9 145 46.2
CBR_g48514 Chara braunii HOM05D005379 ORTHO05D006661 1.7e-25 120.6 106 51.9
Manes.06G131601 Manihot esculenta HOM05D005379 ORTHO05D006661 9.4e-24 114.8 131 53.4
A02p12440 Brassica napus HOM05D005379 ORTHO05D006661 1.8e-22 110.5 80 67.5
SMO361G0220 Selaginella moellendorffii HOM05D005379 ORTHO05D006661 2.3e-22 110.2 103 47.6
BraA02t06308Z Brassica rapa HOM05D005379 ORTHO05D006661 1.5e-21 107.5 80 65.0
BcaC03g14620 Brassica carinata HOM05D005379 ORTHO05D006661 5.9e-18 95.5 76 60.5
BolC2t08192H Brassica oleracea HOM05D005379 ORTHO05D006661 2.9e-17 93.2 130 40.8
MCO01G548 Micromonas commoda HOM05D005379 ORTHO05D006661 8.5e-17 91.7 102 41.2
HPP92_009968 Vanilla planifolia HOM05D005379 ORTHO05D006661 1.6e-10 70.9 103 43.7
HPP92_009967 Vanilla planifolia HOM05D005379 ORTHO05D006661 1.3e-09 67.8 60 56.7
Cre01.g052050 Chlamydomonas reinhardtii HOM05D005379 ORTHO05D006661 3.3e-08 63.2 100 35.0
Lalb_Chr16g0382801 Lupinus albus HOM05D005379 ORTHO05D006661 7.3e-08 62.0 82 43.9
SEGI_00850 Sequoiadendron giganteum HOM05D005379 ORTHO05D006661 1.6e-07 60.8 47 66.0
C02p20560 Brassica napus HOM05D005379 ORTHO05D006661 4.7e-07 59.3 52 51.9


User provided reference genes

Program Settings