Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2439 Utricularia gibba HOM05D006657 ORTHO05D005964 0.0e+00 1762.7 869 100.0
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 8.0e-57 226.5 1005 27.0
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 9.5e-50 203.0 1066 26.0
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 6.8e-48 196.8 1016 25.9
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 2.6e-47 194.9 939 26.5
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 9.8e-47 193.0 939 26.4
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 2.5e-34 151.8 610 27.4
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 1.4e-24 119.4 465 26.7
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 5.2e-24 117.5 424 27.1
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 1.5e-23 115.9 385 30.9
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 2.2e-22 112.1 339 29.2
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 6.4e-22 110.5 375 28.0
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 3.2e-21 108.2 349 30.1
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 3.2e-21 108.2 331 31.1
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 5.4e-21 107.5 325 32.0
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 7.1e-21 107.1 324 32.1
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 6.0e-20 104.0 291 29.9
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 3.9e-19 101.3 435 25.3
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 5.1e-19 100.9 381 28.9
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 1.1e-18 99.8 525 25.7
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 1.5e-18 99.4 364 28.6
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 4.3e-18 97.8 154 39.0
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 5.6e-18 97.4 313 29.7
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 9.5e-18 96.7 251 30.7
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 1.6e-17 95.9 345 28.7
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 2.1e-17 95.5 473 25.4
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 2.8e-17 95.1 382 26.7
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 2.8e-17 95.1 319 27.9
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 6.2e-17 94.0 285 28.4
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 6.2e-17 94.0 354 27.4
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 8.1e-17 93.6 317 28.1
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.1e-16 93.2 349 27.5
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.8e-16 92.4 330 29.1
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.8e-16 92.4 333 25.2
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 2.3e-16 92.0 396 25.5
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 3.1e-16 91.7 406 25.6
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 5.2e-16 90.9 345 27.8
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 7.6e-15 87.0 292 29.5
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 7.6e-15 87.0 478 22.0
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 9.9e-15 86.7 528 25.4
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 2.9e-14 85.1 418 23.9
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 2.9e-14 85.1 230 30.4
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 2.9e-14 85.1 324 27.2
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 4.9e-14 84.3 296 28.0
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 4.9e-14 84.3 261 27.6
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 6.4e-14 84.0 338 25.4
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 8.4e-14 83.6 314 27.4
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 8.4e-14 83.6 183 32.2
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 1.9e-13 82.4 219 31.5
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 2.4e-13 82.0 357 27.2
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 3.2e-13 81.6 195 31.3
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 4.1e-13 81.3 388 25.3
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 5.4e-13 80.9 438 22.1
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 5.4e-13 80.9 169 35.5
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 9.2e-13 80.1 82 43.9
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 1.2e-12 79.7 286 27.3
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 1.6e-12 79.3 481 24.1
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 1.6e-12 79.3 513 23.8
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 1.6e-12 79.3 343 26.2
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 2.1e-12 79.0 215 30.7
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 2.7e-12 78.6 304 27.6
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 1.0e-11 76.6 319 26.3
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 1.0e-11 76.6 306 27.8
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 2.3e-11 75.5 136 35.3
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 3.0e-11 75.1 192 30.2
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 8.6e-11 73.6 352 24.7
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.1e-10 73.2 192 29.2
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 1.1e-10 73.2 192 29.2
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 1.9e-10 72.4 516 23.1
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 1.9e-10 72.4 134 34.3
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 2.5e-10 72.0 171 31.6
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 2.5e-10 72.0 189 30.7
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 3.3e-10 71.6 170 30.6
BcaB02g09591 Brassica carinata HOM05D009821 ORTHO05D005964 5.6e-10 70.9 302 26.5
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 5.6e-10 70.9 242 27.3
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 7.3e-10 70.5 178 29.8
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 7.3e-10 70.5 523 23.9
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 7.3e-10 70.5 192 26.0
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 7.3e-10 70.5 314 26.1
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 1.6e-09 69.3 302 24.2
A06p28240 Brassica napus HOM05D009821 ORTHO05D005964 2.1e-09 68.9 346 24.3
BraA06t25767Z Brassica rapa HOM05D009821 ORTHO05D005964 2.1e-09 68.9 346 24.3
BcaC01g02410 Brassica carinata HOM05D009821 ORTHO05D005964 3.6e-09 68.2 239 26.4
C03p65560 Brassica napus HOM05D009821 ORTHO05D005964 3.6e-09 68.2 239 26.4
BolC3t18811H Brassica oleracea HOM05D009821 ORTHO05D005964 3.6e-09 68.2 239 26.4
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 6.2e-09 67.4 187 29.9
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 1.4e-08 66.2 135 28.9
BcaC07g39413 Brassica carinata HOM05D009821 ORTHO05D005964 1.8e-08 65.9 265 26.0
A06p18270 Brassica napus HOM05D009821 ORTHO05D005964 1.8e-08 65.9 249 28.9
BraA06t24910Z Brassica rapa HOM05D009821 ORTHO05D005964 1.8e-08 65.9 249 28.9
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 1.8e-08 65.9 263 25.1
C08p24510 Brassica napus HOM05D009821 ORTHO05D005964 2.4e-08 65.5 310 25.2
BolC8t50069H Brassica oleracea HOM05D009821 ORTHO05D005964 2.4e-08 65.5 310 25.2
C01p30840 Brassica napus HOM05D009821 ORTHO05D005964 3.1e-08 65.1 395 22.5
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 3.1e-08 65.1 150 30.0
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 5.2e-08 64.3 151 33.1
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 8.9e-08 63.5 92 39.1
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 8.9e-08 63.5 176 30.1
BcaC09g49952 Brassica carinata HOM05D009821 ORTHO05D005964 1.2e-07 63.2 300 25.0
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 1.2e-07 63.2 309 23.6
AT3G49490 Arabidopsis thaliana HOM05D009821 ORTHO05D005964 1.5e-07 62.8 313 24.0
BcaB01g00702 Brassica carinata HOM05D009821 ORTHO05D005964 1.5e-07 62.8 343 24.2
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 1.5e-07 62.8 287 28.9
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 2.0e-07 62.4 368 22.8
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 2.0e-07 62.4 68 48.5
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 4.4e-07 61.2 68 44.1
BcaB05g23119 Brassica carinata HOM05D009821 ORTHO05D005964 5.8e-07 60.8 350 22.9
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 7.6e-07 60.5 378 23.5
BolC1t03016H Brassica oleracea HOM05D009821 ORTHO05D005964 7.6e-07 60.5 401 23.7
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 9.9e-07 60.1 221 26.2
Carub.0005s1582 Capsella rubella HOM05D009821 ORTHO05D005964 9.9e-07 60.1 280 22.5
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 9.9e-07 60.1 71 42.3
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 9.9e-07 60.1 71 42.3
PSO782G1897 Papaver somniferum HOM05D006657 ORTHO05D005964 9.9e-07 60.1 372 23.7
A01p24720 Brassica napus HOM05D009821 ORTHO05D005964 3.8e-06 58.2 279 23.3
BraA01t02384Z Brassica rapa HOM05D009821 ORTHO05D005964 3.8e-06 58.2 279 23.3
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 4.9e-06 57.8 93 37.6
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 4.9e-06 57.8 207 24.6
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 6.4e-06 57.4 281 23.5
PSO170G0737 Papaver somniferum HOM05D006657 ORTHO05D005964 8.4e-06 57.0 370 23.8


User provided reference genes

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