Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2347 Utricularia gibba HOM05D003097 ORTHO05D003437 6.3e-53 210.7 121 100.0
SalBow3G2226 Salvia bowleyana HOM05D003097 ORTHO05D003437 6.8e-23 110.9 119 60.5
MSTRG.27673 Avicennia marina HOM05D003097 ORTHO05D003437 5.0e-18 94.7 116 56.9
Migut.N01282 Erythranthe guttata HOM05D003097 ORTHO05D003437 2.1e-16 89.4 116 56.0
Oeu002954.1 Olea europaea HOM05D003097 ORTHO05D003437 8.9e-15 84.0 119 52.9
SGA_v2.0_scaffold207G41883 Striga asiatica HOM05D003097 ORTHO05D003437 8.3e-13 77.4 119 51.3
Cc02_g16520 Coffea canephora HOM05D003097 ORTHO05D003437 1.4e-12 76.6 120 52.5
Prupe.8G160700 Prunus persica HOM05D003097 ORTHO05D003437 7.1e-12 74.3 111 51.4
SGA_v2.0_scaffold80G25871 Striga asiatica HOM05D003097 ORTHO05D003437 6.0e-11 71.2 116 48.3
Ciclev10028783m.g Citrus clementina HOM05D003097 ORTHO05D003437 3.9e-10 68.6 116 50.0
Nitab4.5_0007006g0010 Nicotiana tabacum HOM05D003097 ORTHO05D003437 5.1e-10 68.2 108 49.1
PGSC0003DMG400001594 Solanum tuberosum HOM05D003097 ORTHO05D003437 5.1e-10 68.2 115 49.6
Cfa005183 Carpinus fangiana HOM05D003097 ORTHO05D003437 1.1e-09 67.0 112 47.3
RcHm_v2.0_Chr6g0245181 Rosa chinensis HOM05D003097 ORTHO05D003437 1.1e-09 67.0 111 46.8
Solyc01g111130.4 Solanum lycopersicum HOM05D003097 ORTHO05D003437 1.5e-09 66.6 115 48.7
Atru.chr5.3226 Acer truncatum HOM05D003097 ORTHO05D003437 2.5e-09 65.9 111 48.6
Nitab4.5_0000980g0160 Nicotiana tabacum HOM05D003097 ORTHO05D003437 2.5e-09 65.9 115 47.8
Hma1.2p1_1385F.1_g279750 Hydrangea macrophylla HOM05D003097 ORTHO05D003437 4.3e-09 65.1 113 46.9
Nitab4.5_0000283g0080 Nicotiana tabacum HOM05D003097 ORTHO05D003437 5.6e-09 64.7 115 47.0
Peaxi162Scf00684g00019 Petunia axillaris HOM05D003097 ORTHO05D003437 7.3e-09 64.3 109 53.2
Duzib248G0851 Durio zibethinus HOM05D003097 ORTHO05D003437 1.2e-08 63.5 111 48.6
Actinidia32084 Actinidia chinensis HOM05D003097 ORTHO05D003437 1.6e-08 63.2 114 49.1
COL.COLO4_17256 Corchorus olitorius HOM05D003097 ORTHO05D003437 1.6e-08 63.2 116 48.3
Sopen01g053190 Solanum pennellii HOM05D003097 ORTHO05D003437 1.6e-08 63.2 115 47.0
CAN.G588.25 Capsicum annuum HOM05D003097 ORTHO05D003437 2.1e-08 62.8 112 47.3
Gohir.A03G203100 Gossypium hirsutum HOM05D003097 ORTHO05D003437 2.1e-08 62.8 111 48.6
Gohir.D02G224400 Gossypium hirsutum HOM05D003097 ORTHO05D003437 2.1e-08 62.8 111 48.6
Thecc.02G067000 Theobroma cacao HOM05D003097 ORTHO05D003437 2.1e-08 62.8 111 45.9
FvH4_2g02000 Fragaria vesca HOM05D003097 ORTHO05D003437 2.8e-08 62.4 111 49.5
Duzib052G0688 Durio zibethinus HOM05D003097 ORTHO05D003437 4.7e-08 61.6 107 48.6
Gorai.005G252200 Gossypium raimondii HOM05D003097 ORTHO05D003437 6.2e-08 61.2 111 47.7
CSS0015165 Camellia sinensis var. sinensis HOM05D003097 ORTHO05D003437 1.4e-07 60.1 91 48.4
Nn5g29092 Nelumbo nucifera HOM05D003097 ORTHO05D003437 1.4e-07 60.1 110 44.5
Ca_19000_v3 Cicer arietinum L. HOM05D003097 ORTHO05D003437 1.8e-07 59.7 107 46.7
Rhsim05G0063200 Rhododendron simsii HOM05D001403 ORTHO05D001313 2.3e-07 59.3 113 44.2
TAR376G0456 Trochodendron aralioides HOM05D003097 ORTHO05D003437 2.3e-07 59.3 110 46.4
FAN24G0689 Fragaria x ananassa HOM05D003097 ORTHO05D003437 3.1e-07 58.9 111 48.6
Lj5C185T3 Lonicera japonica HOM05D003097 ORTHO05D003437 4.0e-07 58.5 112 46.4
Lalb_Chr19g0139511 Lupinus albus HOM05D003097 ORTHO05D003437 4.0e-07 58.5 107 49.5
FAN20G1328 Fragaria x ananassa HOM05D003097 ORTHO05D003437 5.2e-07 58.2 111 47.7
Lalb_Chr01g0001311 Lupinus albus HOM05D003097 ORTHO05D003437 5.2e-07 58.2 107 47.7
Sabra09G0099100 Salix brachista HOM05D003097 ORTHO05D003437 5.2e-07 58.2 81 49.4
CANSAT25G1721 Cannabis sativa HOM05D003097 ORTHO05D003437 6.8e-07 57.8 107 46.7
FAN27G3375 Fragaria x ananassa HOM05D003097 ORTHO05D003437 6.8e-07 57.8 111 46.8
MD05G1115800 Malus domestica HOM05D003097 ORTHO05D003437 8.9e-07 57.4 111 47.7
Medtr4g075480 Medicago truncatula HOM05D003097 ORTHO05D003437 8.9e-07 57.4 107 43.9
Peaxi162Scf00362g01043 Petunia axillaris HOM05D003097 ORTHO05D003437 8.9e-07 57.4 115 45.2
Sabra04G0112700 Salix brachista HOM05D003097 ORTHO05D003437 8.9e-07 57.4 111 45.9
Nitab4.5_0000128g0360 Nicotiana tabacum HOM05D003097 ORTHO05D003437 2.0e-06 56.2 116 45.7
Actinidia31235 Actinidia chinensis HOM05D003097 ORTHO05D003437 3.4e-06 55.5 93 45.2
CSS0029047 Camellia sinensis var. sinensis HOM05D003097 ORTHO05D003437 3.4e-06 55.5 73 50.7
TAR628G1174 Trochodendron aralioides HOM05D003097 ORTHO05D003437 3.4e-06 55.5 97 45.4
FAN15G0773 Fragaria x ananassa HOM05D003097 ORTHO05D003437 5.8e-06 54.7 92 50.0
Lj3g0016767 Lotus japonicus HOM05D003097 ORTHO05D003437 5.8e-06 54.7 107 43.0
TPR.G17152 Trifolium pratense HOM05D003097 ORTHO05D003437 7.6e-06 54.3 115 43.5
CsaV3_2G015700 Cucumis sativus L. HOM05D003097 ORTHO05D003437 9.9e-06 53.9 111 45.0


User provided reference genes

Program Settings