Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 2.2e-168 595.5 289 100.0
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 2.2e-91 339.7 217 76.0
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 8.5e-88 327.8 217 73.7
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 1.1e-87 327.4 215 74.0
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 2.5e-87 326.2 217 72.8
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 7.2e-87 324.7 217 72.8
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 9.4e-87 324.3 216 72.7
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 9.4e-87 324.3 217 72.4
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 1.6e-86 323.6 217 72.4
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 2.7e-86 322.8 217 71.9
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 5.1e-85 318.5 218 72.5
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 1.1e-84 317.4 217 70.0
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 2.5e-84 316.2 217 71.0
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 3.7e-83 312.4 219 68.5
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 4.8e-83 312.0 217 71.0
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 8.2e-83 311.2 218 70.6
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 1.1e-82 310.8 217 69.1
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 1.4e-82 310.5 217 68.7
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 1.4e-82 310.5 217 69.6
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.8e-82 310.1 218 70.2
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.8e-82 310.1 217 70.5
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 1.8e-82 310.1 217 69.6
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 2.4e-82 309.7 217 70.5
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 2.4e-82 309.7 218 69.3
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 3.1e-82 309.3 217 68.7
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 3.1e-82 309.3 217 68.7
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 4.1e-82 308.9 217 67.7
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 4.1e-82 308.9 217 68.7
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 5.3e-82 308.5 217 70.0
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.2e-81 307.4 218 69.7
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 1.2e-81 307.4 218 69.7
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 1.2e-81 307.4 217 67.7
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 2.0e-81 306.6 217 67.3
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 2.6e-81 306.2 217 68.7
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 4.5e-81 305.4 220 67.3
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 1.0e-80 304.3 215 69.3
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 1.3e-80 303.9 217 67.3
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 1.3e-80 303.9 218 68.3
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 2.2e-80 303.1 217 68.2
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.2e-80 303.1 217 67.3
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.9e-80 302.8 217 68.2
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.9e-80 302.8 217 68.2
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.8e-80 302.4 217 67.7
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 5.0e-80 302.0 217 66.4
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 5.0e-80 302.0 216 67.6
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 6.5e-80 301.6 218 69.3
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 6.5e-80 301.6 218 69.3
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 6.5e-80 301.6 217 68.7
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 6.5e-80 301.6 217 68.7
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 6.5e-80 301.6 217 67.7
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 6.5e-80 301.6 217 69.6
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 8.5e-80 301.2 219 65.8
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 1.1e-79 300.8 220 65.5
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 3.2e-79 299.3 218 66.5
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 7.2e-79 298.1 217 69.1
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 7.2e-79 298.1 216 68.1
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 1.2e-78 297.4 215 67.0
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 1.6e-78 297.0 219 64.4
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 1.6e-78 297.0 216 69.0
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 7.9e-78 294.7 218 64.2
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 1.0e-77 294.3 219 63.9
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 1.0e-77 294.3 219 63.9
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 1.4e-77 293.9 216 67.1
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 1.4e-77 293.9 219 63.9
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 1.8e-77 293.5 217 65.9
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.8e-77 293.5 217 66.4
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 2.3e-77 293.1 219 63.5
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 5.1e-77 292.0 219 63.5
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 6.7e-77 291.6 219 63.0
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 6.7e-77 291.6 219 63.0
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 6.7e-77 291.6 258 60.1
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 1.1e-76 290.8 189 71.4
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 1.5e-76 290.4 219 62.6
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 2.0e-76 290.0 271 56.5
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 4.4e-76 288.9 218 62.8
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 5.7e-76 288.5 217 64.1
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 7.4e-76 288.1 209 67.9
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 1.3e-75 287.3 217 65.4
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 1.7e-75 287.0 213 63.8
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 1.7e-75 287.0 219 62.1
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 3.7e-75 285.8 251 59.4
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 4.8e-75 285.4 189 73.0
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 2.0e-73 280.0 219 63.0
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 2.6e-73 279.6 217 61.8
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 2.6e-73 279.6 219 62.6
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 1.7e-72 276.9 220 63.2
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 2.2e-72 276.6 224 61.6
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 8.5e-72 274.6 217 62.7
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 1.1e-71 274.2 217 62.7
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 1.1e-71 274.2 219 61.2
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 1.1e-71 274.2 217 63.1
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 8.0e-70 268.1 219 61.6
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 1.0e-69 267.7 220 60.0
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 1.0e-69 267.7 217 60.4
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 2.3e-69 266.5 218 63.3
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 3.0e-69 266.2 217 58.5
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 1.1e-68 264.2 224 59.4
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 7.4e-68 261.5 219 60.3
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 2.2e-67 260.0 219 60.3
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 2.8e-67 259.6 219 60.3
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 8.2e-67 258.1 170 71.8
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 1.1e-66 257.7 217 61.8
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 5.3e-66 255.4 217 58.5
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 2.0e-65 253.4 221 56.6
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 2.0e-65 253.4 221 56.1
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 1.3e-64 250.8 217 58.5
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 5.0e-64 248.8 217 62.2
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 1.1e-63 247.7 221 53.8
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 4.7e-62 242.3 218 53.7
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 8.0e-62 241.5 208 56.2
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 1.8e-61 240.4 221 56.1
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 3.1e-58 229.6 175 64.0
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 5.9e-57 225.3 243 53.5
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 5.9e-57 225.3 243 53.5
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 6.5e-56 221.9 236 51.3
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 3.2e-55 219.5 218 52.8
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 1.0e-53 214.5 224 52.7
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 2.3e-53 213.4 217 55.3
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 2.2e-51 206.8 240 51.2
C02p06000 Brassica napus HOM05D004972 ORTHO05D006309 4.2e-47 192.6 168 57.1
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 6.1e-46 188.7 216 44.0
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.9e-39 167.2 213 41.8
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.3e-39 166.4 125 60.8
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 7.3e-39 165.2 205 42.9
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 5.2e-37 159.1 206 39.8
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 4.4e-36 156.0 230 37.4
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 1.9e-34 150.6 130 55.4
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 1.6e-33 147.5 217 38.7
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 1.1e-31 141.4 213 37.6
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.9e-27 125.9 100 59.0
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.9e-27 125.9 100 59.0
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 5.4e-26 122.5 208 40.4
Pp3c7_4620 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.1e-21 108.2 141 44.0
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 2.0e-20 104.0 72 63.9
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 1.2e-14 84.7 65 53.8
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 3.1e-13 80.1 105 43.8
CDE02G3434 Ceratophyllum demersum HOM05D004972 ORTHO05D000215 4.0e-13 79.7 132 40.9
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 4.0e-13 79.7 77 48.1
CSS0010746 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 7.6e-12 75.5 42 78.6
CSS0040756 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 7.6e-12 75.5 42 78.6
CSS0044245 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.3e-11 74.7 40 82.5
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 4.9e-11 72.8 79 50.6
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 4.9e-11 72.8 42 78.6
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 8.4e-11 72.0 122 38.5
Cfa026650 Carpinus fangiana HOM05D004972 ORTHO05D006309 1.2e-09 68.2 236 26.7
CSS0013064 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.0e-08 65.1 34 82.4
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 2.3e-08 63.9 51 60.8
SEGI_16480 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 3.3e-07 60.1 92 40.2


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