Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2302 Utricularia gibba HOM05D004556 ORTHO05D005298 6.3e-194 680.6 354 100.0
SalBow4G3027 Salvia bowleyana HOM05D004556 ORTHO05D005298 8.9e-140 500.7 303 82.2
SGA_v2.0_scaffold196G40974 Striga asiatica HOM05D004556 ORTHO05D005298 1.2e-136 490.3 303 80.9
PGSC0003DMG400022512 Solanum tuberosum HOM05D004556 ORTHO05D005298 1.6e-136 490.0 299 79.9
MSTRG.5093 Avicennia marina HOM05D004556 ORTHO05D005298 2.7e-136 489.2 299 81.3
SGA_v2.0_scaffold43G16266 Striga asiatica HOM05D004556 ORTHO05D005298 3.5e-136 488.8 299 81.3
CAN.G134.134 Capsicum annuum HOM05D004556 ORTHO05D005298 1.0e-135 487.3 299 79.9
Nitab4.5_0005441g0010 Nicotiana tabacum HOM05D004556 ORTHO05D005298 1.7e-135 486.5 299 79.6
Sopen01g041350 Solanum pennellii HOM05D004556 ORTHO05D005298 5.1e-135 485.0 299 78.9
Gorai.007G284100 Gossypium raimondii HOM05D004556 ORTHO05D005298 1.9e-134 483.0 299 78.6
Cc02_g31820 Coffea canephora HOM05D004556 ORTHO05D005298 2.5e-134 482.6 301 79.7
CSS0028825 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 3.3e-134 482.3 303 79.5
Peaxi162Scf01049g00037 Petunia axillaris HOM05D004556 ORTHO05D005298 3.3e-134 482.3 299 79.3
QL03p024856 Quercus lobata HOM05D004556 ORTHO05D005298 4.3e-134 481.9 302 78.1
Gohir.D11G264100 Gossypium hirsutum HOM05D004556 ORTHO05D005298 7.3e-134 481.1 299 78.3
Prupe.6G340800 Prunus persica HOM05D004556 ORTHO05D005298 7.3e-134 481.1 303 77.2
MD12G1237600 Malus domestica HOM05D004556 ORTHO05D005298 1.6e-133 479.9 303 77.2
SalBow4G2463 Salvia bowleyana HOM05D004556 ORTHO05D005298 2.1e-133 479.6 338 74.3
Thecc.05G287400 Theobroma cacao HOM05D004556 ORTHO05D005298 2.1e-133 479.6 299 79.3
ClCG02G016480 Citrullus lanatus HOM05D004556 ORTHO05D005298 3.6e-133 478.8 301 77.1
Dinv17770 Davidia involucrata HOM05D004556 ORTHO05D005298 4.7e-133 478.4 303 77.9
MD04G1221600 Malus domestica HOM05D004556 ORTHO05D005298 6.2e-133 478.0 303 77.9
CsaV3_2G004290 Cucumis sativus L. HOM05D004556 ORTHO05D005298 1.1e-132 477.2 302 76.8
Dinv11531 Davidia involucrata HOM05D004556 ORTHO05D005298 1.1e-132 477.2 299 78.9
Potri.005G051300 Populus trichocarpa HOM05D004556 ORTHO05D005298 1.1e-132 477.2 303 76.2
Duzib106G0883 Durio zibethinus HOM05D004556 ORTHO05D005298 1.8e-132 476.5 299 77.6
Duzib128G0953 Durio zibethinus HOM05D004556 ORTHO05D005298 2.4e-132 476.1 299 77.9
COL.COLO4_15298 Corchorus olitorius HOM05D004556 ORTHO05D005298 3.1e-132 475.7 299 76.9
MELO3C004366.2 Cucumis melo HOM05D004556 ORTHO05D005298 3.1e-132 475.7 302 76.5
CSS0008105 Camellia sinensis var. sinensis HOM05D004556 ORTHO05D005298 9.0e-132 474.2 303 78.9
RcHm_v2.0_Chr3g0451841 Rosa chinensis HOM05D004556 ORTHO05D005298 1.2e-131 473.8 303 77.2
THA.LOC104818641 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 1.2e-131 473.8 301 78.4
Gohir.A08G214400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 1.5e-131 473.4 299 77.6
Ciclev10001991m.g Citrus clementina HOM05D004556 ORTHO05D005298 3.4e-131 472.2 301 76.4
Manes.09G154700 Manihot esculenta HOM05D004556 ORTHO05D005298 3.4e-131 472.2 303 77.2
Duzib177G0375 Durio zibethinus HOM05D004556 ORTHO05D005298 5.8e-131 471.5 315 74.6
Gohir.D08G231400 Gossypium hirsutum HOM05D004556 ORTHO05D005298 5.8e-131 471.5 299 77.3
Sed0015548 Sechium edule HOM05D004556 ORTHO05D005298 7.6e-131 471.1 301 76.4
VMungo0540G1874 Vigna mungo HOM05D004556 ORTHO05D005298 7.6e-131 471.1 303 75.9
Glyma.03G245800 Glycine max HOM05D004556 ORTHO05D005298 9.9e-131 470.7 303 76.6
Actinidia05768 Actinidia chinensis HOM05D004556 ORTHO05D005298 1.3e-130 470.3 301 78.1
arahy.Tifrunner.gnm1.ann1.SCJ0TV Arachis hypogaea HOM05D004556 ORTHO05D005298 1.3e-130 470.3 303 75.9
FAN02G1055 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.7e-130 469.9 303 76.6
Gorai.004G245800 Gossypium raimondii HOM05D004556 ORTHO05D005298 1.7e-130 469.9 299 76.9
arahy.Tifrunner.gnm1.ann1.ZA55QJ Arachis hypogaea HOM05D004556 ORTHO05D005298 6.4e-130 468.0 303 75.6
FvH4_6g03340 Fragaria vesca HOM05D004556 ORTHO05D005298 6.4e-130 468.0 303 75.6
Glyma.19G243300 Glycine max HOM05D004556 ORTHO05D005298 6.4e-130 468.0 303 75.6
Eucgr.B01695 Eucalyptus grandis HOM05D004556 ORTHO05D005298 8.4e-130 467.6 303 76.2
GSVIVG01021835001 Vitis vinifera HOM05D004556 ORTHO05D005298 8.4e-130 467.6 299 76.3
CANSAT54G0892 Cannabis sativa HOM05D004556 ORTHO05D005298 1.1e-129 467.2 303 76.6
Phvul.006G100100 Phaseolus vulgaris HOM05D004556 ORTHO05D005298 1.1e-129 467.2 303 75.6
FAN05G0551 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.4e-129 466.8 299 75.9
Hma1.2p1_0083F.1_g042880 Hydrangea macrophylla HOM05D004556 ORTHO05D005298 1.4e-129 466.8 303 75.9
Sabra13G0036200 Salix brachista HOM05D004556 ORTHO05D005298 2.4e-129 466.1 303 76.2
Potri.013G038700 Populus trichocarpa HOM05D004556 ORTHO05D005298 5.4e-129 464.9 303 75.2
TPR.G6984 Trifolium pratense HOM05D004556 ORTHO05D005298 7.1e-129 464.5 303 75.6
CiPaw.07G064700 Carya illinoinensis HOM05D004556 ORTHO05D005298 9.3e-129 464.2 303 75.2
Ca_09410_v3 Cicer arietinum L. HOM05D004556 ORTHO05D005298 9.3e-129 464.2 303 75.6
Sp3g03660 Schrenkiella parvula HOM05D004556 ORTHO05D005298 9.3e-129 464.2 303 76.6
Hund22124 Selenicereus undatus HOM05D004556 ORTHO05D005298 9.3e-129 464.2 299 75.6
FAN05G3160 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.2e-128 463.8 297 76.1
Sed0026396 Sechium edule HOM05D004556 ORTHO05D005298 2.1e-128 463.0 301 74.8
Lalb_Chr15g0076861 Lupinus albus HOM05D004556 ORTHO05D005298 2.7e-128 462.6 303 75.2
BolC5t34901H Brassica oleracea HOM05D004556 ORTHO05D005298 6.0e-128 461.5 303 76.2
Cpa.g.sc117.71 Carica papaya HOM05D004556 ORTHO05D005298 6.0e-128 461.5 303 75.2
Rhsim05G0160800 Rhododendron simsii HOM05D004556 ORTHO05D005298 7.8e-128 461.1 303 76.6
BcaB04g19297 Brassica carinata HOM05D004556 ORTHO05D005298 1.0e-127 460.7 303 75.9
FAN14G0561 Fragaria x ananassa HOM05D004556 ORTHO05D005298 1.0e-127 460.7 299 75.3
Carub.0003s0402 Capsella rubella HOM05D004556 ORTHO05D005298 1.3e-127 460.3 305 75.7
Atru.chr2.783 Acer truncatum HOM05D004556 ORTHO05D005298 1.7e-127 459.9 301 74.1
Thhalv10021217m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 1.7e-127 459.9 303 75.6
TWI56G0949 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 2.3e-127 459.5 301 74.8
AT3G04830 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 3.0e-127 459.1 301 75.4
EL10Ac8g19247 Beta vulgaris HOM05D004556 ORTHO05D005298 3.0e-127 459.1 303 73.6
TAR362G0361 Trochodendron aralioides HOM05D004556 ORTHO05D005298 3.0e-127 459.1 303 73.6
BcaC01g04346 Brassica carinata HOM05D004556 ORTHO05D005298 6.6e-127 458.0 301 75.4
A03p33860 Brassica napus HOM05D004556 ORTHO05D005298 6.6e-127 458.0 301 75.7
C05p62480 Brassica napus HOM05D004556 ORTHO05D005298 6.6e-127 458.0 303 75.2
BraA03t12560Z Brassica rapa HOM05D004556 ORTHO05D005298 6.6e-127 458.0 301 75.7
Medtr7g114810 Medicago truncatula HOM05D004556 ORTHO05D005298 6.6e-127 458.0 303 74.3
AL3G14990 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 8.7e-127 457.6 301 75.1
DCAR_029537 Daucus carota HOM05D004556 ORTHO05D005298 1.5e-126 456.8 303 75.9
TAR365G0624 Trochodendron aralioides HOM05D004556 ORTHO05D005298 3.3e-126 455.7 303 73.6
Aqoxy5G00420 Aquilegia oxysepala HOM05D004556 ORTHO05D005298 4.3e-126 455.3 301 73.1
BolC3t16405H Brassica oleracea HOM05D004556 ORTHO05D005298 4.3e-126 455.3 301 75.1
BraA05t22977Z Brassica rapa HOM05D004556 ORTHO05D005298 1.3e-125 453.8 303 75.2
C03p41170 Brassica napus HOM05D004556 ORTHO05D005298 1.6e-125 453.4 302 75.2
Lsat_1_v5_gn_1_96700 Lactuca sativa HOM05D004556 ORTHO05D005298 4.8e-125 451.8 299 74.2
Lalb_Chr18g0045051 Lupinus albus HOM05D004556 ORTHO05D005298 8.1e-125 451.1 303 73.9
Sc09g0003820 Simmondsia chinensis HOM05D004556 ORTHO05D005298 8.1e-125 451.1 303 73.3
Carub.0006s2567 Capsella rubella HOM05D004556 ORTHO05D005298 1.1e-124 450.7 302 73.8
Lj1g0006589 Lotus japonicus HOM05D004556 ORTHO05D005298 1.4e-124 450.3 303 72.9
Nitab4.5_0005729g0050 Nicotiana tabacum HOM05D004556 ORTHO05D005298 1.4e-124 450.3 299 75.6
Aa31LG5G15220 Aethionema arabicum HOM05D004556 ORTHO05D005298 1.8e-124 449.9 315 71.7
AT5G28220 Arabidopsis thaliana HOM05D004556 ORTHO05D005298 2.4e-124 449.5 312 71.8
ECA232G2012 Erigeron canadensis HOM05D004556 ORTHO05D005298 2.4e-124 449.5 299 73.9
HanXRQChr08g0230031 Helianthus annuus HOM05D004556 ORTHO05D005298 3.1e-124 449.1 299 73.6
AL6G40460 Arabidopsis lyrata HOM05D004556 ORTHO05D005298 4.0e-124 448.7 302 73.8
A05p42760 Brassica napus HOM05D004556 ORTHO05D005298 4.0e-124 448.7 303 74.6
PGR083G2383 Punica granatum HOM05D004556 ORTHO05D005298 9.0e-124 447.6 303 72.3
Sabra05G0045300 Salix brachista HOM05D004556 ORTHO05D005298 2.0e-123 446.4 338 67.2
Thhalv10004492m.g Eutrema salsugineum HOM05D004556 ORTHO05D005298 7.6e-123 444.5 324 70.4
Cfa006453 Carpinus fangiana HOM05D004556 ORTHO05D005298 1.1e-121 440.7 301 72.8
AUR62034008 Chenopodium quinoa HOM05D004556 ORTHO05D005298 1.4e-121 440.3 299 72.2
PSO210G7536 Papaver somniferum HOM05D004556 ORTHO05D005298 1.4e-121 440.3 299 71.6
PSO832G3279 Papaver somniferum HOM05D004556 ORTHO05D005298 4.2e-121 438.7 299 70.9
ATR0665G084 Amborella trichopoda HOM05D004556 ORTHO05D005298 5.4e-121 438.3 299 70.6
Ah.14g085270 Amaranthus hybridus HOM05D004556 ORTHO05D005298 1.6e-120 436.8 298 71.1
AUR62027473 Chenopodium quinoa HOM05D004556 ORTHO05D005298 2.1e-120 436.4 299 71.6
vmacro21412 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 6.0e-120 434.9 321 68.8
CDE10G0245 Ceratophyllum demersum HOM05D004556 ORTHO05D005298 3.9e-119 432.2 303 70.0
MBI11_g10323_MAGBIO Magnolia biondii HOM05D004556 ORTHO05D005298 7.4e-118 427.9 310 68.7
HPP92_025859 Vanilla planifolia HOM05D004556 ORTHO05D005298 2.1e-117 426.4 303 69.0
Dinv00306 Davidia involucrata HOM05D004556 ORTHO05D005298 8.4e-114 414.5 241 83.4
Solyc01g097740.3 Solanum lycopersicum HOM05D004556 ORTHO05D005298 1.1e-113 414.1 258 77.9
Manes.08G132100 Manihot esculenta HOM05D004556 ORTHO05D005298 9.3e-113 411.0 249 79.1
Os02g0127000 Oryza sativa ssp. japonica HOM05D004556 ORTHO05D005298 2.7e-112 409.5 290 67.6
SEGI_22763 Sequoiadendron giganteum HOM05D004556 ORTHO05D005298 6.0e-112 408.3 302 64.9
Oeu045907.1 Olea europaea HOM05D004556 ORTHO05D005298 1.0e-111 407.5 312 69.6
Zm00001eb210860 Zea mays HOM05D004556 ORTHO05D005298 1.3e-111 407.1 290 67.6
Zm00001eb064390 Zea mays HOM05D004556 ORTHO05D005298 3.7e-109 399.1 288 66.7
SHI18353 Sapria himalayana HOM05D004556 ORTHO05D005298 2.4e-108 396.4 339 60.8
TWI12G0865 Tripterygium wilfordii HOM05D004556 ORTHO05D005298 2.2e-106 389.8 301 66.8
HanXRQChr11g0340961 Helianthus annuus HOM05D004556 ORTHO05D005298 9.3e-105 384.4 299 65.2
Pp3c22_11510 Physcomitrium patens HOM05D004556 ORTHO05D005298 9.0e-100 367.9 299 59.9
Nn1g02409 Nelumbo nucifera HOM05D004556 ORTHO05D005298 1.0e-98 364.4 303 62.7
THA.LOC104821680 Tarenaya hassleriana HOM05D004556 ORTHO05D005298 5.1e-95 352.1 209 81.3
Mapoly0010s0190 Marchantia polymorpha HOM05D004556 ORTHO05D005298 7.4e-94 348.2 305 57.7
Psat3g008080 Pisum sativum HOM05D004556 ORTHO05D005298 2.4e-92 343.2 209 79.4
Gohir.A11G254300 Gossypium hirsutum HOM05D004556 ORTHO05D005298 4.5e-91 339.0 299 60.5
vmacro21326 Vaccinium macrocarpon HOM05D004556 ORTHO05D005298 4.5e-91 339.0 509 42.0
SMO351G0459 Selaginella moellendorffii HOM05D004556 ORTHO05D005298 2.2e-90 336.7 290 55.2
CARHR079090 Cardamine hirsuta HOM05D004556 ORTHO05D005298 1.6e-88 330.5 217 76.5
Haze_04338 Corylus avellana HOM05D004556 ORTHO05D005298 6.3e-85 318.5 200 77.5
Lj9C665G12 Lonicera japonica HOM05D004556 ORTHO05D005298 1.1e-76 291.2 242 64.9
AagrBONN_evm.TU.Sc2ySwM_228.926 Anthoceros agrestis HOM05D004556 ORTHO05D005298 5.3e-76 288.9 246 57.7
CBR_g2743 Chara braunii HOM05D004556 ORTHO05D005298 5.0e-74 282.3 301 48.8
Rhsim05G0161200 Rhododendron simsii HOM05D004556 ORTHO05D005298 5.7e-70 268.9 245 60.0
Actinidia30934 Actinidia chinensis HOM05D004556 ORTHO05D005298 3.2e-65 253.1 154 81.2
PRCOL_00003723 Prasinoderma coloniale HOM05D004556 ORTHO05D005298 8.9e-55 218.4 285 41.8
Cre13.g579950 Chlamydomonas reinhardtii HOM05D004556 ORTHO05D005298 1.9e-49 200.7 276 40.6
AagrBONN_evm.TU.Sc2ySwM_228.922 Anthoceros agrestis HOM05D004556 ORTHO05D005298 2.3e-47 193.7 153 62.7
TAR636G2079 Trochodendron aralioides HOM05D001851 ORTHO05D002237 1.2e-46 191.4 108 82.4
Migut.O00800 Erythranthe guttata HOM05D004556 ORTHO05D005298 5.4e-44 182.6 102 85.3
Lj9C668G11 Lonicera japonica HOM05D004556 ORTHO05D005298 1.0e-34 151.8 199 47.7
Potri.013G038501 Populus trichocarpa HOM05D004556 ORTHO05D005298 2.5e-33 147.1 84 83.3
CARHR079080 Cardamine hirsuta HOM05D004556 ORTHO05D005298 1.9e-28 131.0 84 73.8
MCO08G289 Micromonas commoda HOM05D004556 ORTHO05D005298 2.5e-25 120.6 235 31.5
Lj9C665T13 Lonicera japonica HOM05D004556 ORTHO05D005298 5.2e-23 112.8 70 81.4
RcHm_v2.0_Chr6g0244381 Rosa chinensis HOM05D004556 ORTHO05D005298 1.3e-21 108.2 87 66.7
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 6.4e-21 105.9 149 39.6
BolC3t16406H Brassica oleracea HOM05D004556 ORTHO05D005298 8.4e-21 105.5 83 65.1
TPR.G31876 Trifolium pratense HOM05D004556 ORTHO05D005298 1.6e-19 101.3 86 64.0
HanXRQChr13g0394071 Helianthus annuus HOM05D004556 ORTHO05D005298 2.3e-18 97.4 63 74.6
RcHm_v2.0_Chr5g0051541 Rosa chinensis HOM05D004556 ORTHO05D005298 8.7e-18 95.5 121 49.6
AagrBONN_evm.TU.Sc2ySwM_228.821 Anthoceros agrestis HOM05D004556 ORTHO05D005298 1.9e-17 94.4 117 44.4
RcHm_v2.0_Chr7g0229041 Rosa chinensis HOM05D004556 ORTHO05D005298 4.0e-07 60.1 69 50.7
BcaB04g19294 Brassica carinata HOM05D004556 ORTHO05D005298 1.5e-06 58.2 54 59.3
Lj9A668T37 Lonicera japonica HOM05D004556 ORTHO05D005298 1.5e-06 58.2 42 64.3


User provided reference genes

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