Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 2.4e-192 675.2 327 100.0
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 1.2e-69 267.7 250 53.2
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 7.1e-67 258.5 287 47.0
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 3.9e-65 252.7 249 49.0
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 8.2e-63 245.0 241 49.8
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 8.2e-63 245.0 245 49.4
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 5.3e-62 242.3 245 48.6
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 3.4e-61 239.6 270 46.3
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 4.5e-61 239.2 270 46.3
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 1.3e-60 237.7 263 46.4
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 5.0e-60 235.7 266 46.6
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 6.5e-60 235.3 266 46.6
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 8.4e-60 235.0 245 48.2
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 1.9e-59 233.8 243 48.1
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 1.2e-58 231.1 269 45.4
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 6.1e-58 228.8 262 46.6
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 9.7e-56 221.5 298 41.6
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 1.6e-55 220.7 267 43.8
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 1.6e-55 220.7 254 47.2
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 6.3e-55 218.8 239 45.2
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 8.2e-55 218.4 244 44.3
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 8.2e-55 218.4 244 44.3
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 1.1e-54 218.0 220 47.7
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 1.1e-54 218.0 233 46.8
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 5.3e-54 215.7 256 45.7
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.0e-53 213.8 243 45.3
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 2.0e-53 213.8 239 44.4
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 2.0e-53 213.8 258 43.4
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 5.9e-53 212.2 264 42.8
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 5.9e-53 212.2 247 42.5
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 5.9e-53 212.2 242 44.2
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 1.7e-52 210.7 254 42.9
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 3.8e-52 209.5 229 46.3
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 3.8e-52 209.5 241 44.0
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 6.5e-52 208.8 242 43.0
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 2.5e-51 206.8 252 43.3
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 2.5e-51 206.8 230 44.3
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 4.2e-51 206.1 246 41.9
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 5.5e-51 205.7 240 45.0
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 2.3e-49 200.3 220 44.5
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 2.3e-49 200.3 233 42.9
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 3.9e-49 199.5 245 41.6
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 6.7e-49 198.7 245 44.1
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 2.5e-48 196.8 234 44.4
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 2.0e-45 187.2 194 49.0
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 1.0e-44 184.9 232 40.5
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 8.5e-44 181.8 270 37.8
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 1.1e-43 181.4 231 38.5
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 5.5e-43 179.1 261 38.3
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 1.6e-42 177.6 247 39.7
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 7.9e-42 175.3 197 44.2
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 3.0e-41 173.3 246 39.8
Cpa.g.sc81.165 Carica papaya HOM05D007849 ORTHO05D009964 2.4e-38 163.7 254 38.2
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 3.1e-38 163.3 234 38.0
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 3.1e-38 163.3 244 37.7
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 4.1e-38 162.9 246 36.2
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 9.1e-38 161.8 242 39.7
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 3.5e-37 159.8 126 59.5
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 5.0e-36 156.0 193 42.0
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 5.5e-35 152.5 144 47.2
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 3.6e-34 149.8 136 50.7
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 7.0e-30 135.6 181 40.3
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 2.7e-26 123.6 120 50.0
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.1e-26 122.5 123 48.8
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.4e-25 121.3 123 48.0
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.3e-25 120.6 119 49.6
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 5.2e-25 119.4 124 48.4
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.8e-25 119.0 124 48.4
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 1.5e-24 117.9 188 36.7
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 5.7e-24 115.9 124 47.6
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.1e-22 110.2 129 44.2
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 2.9e-20 103.6 278 28.1
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 7.2e-19 99.0 145 33.8
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 8.0e-18 95.5 124 38.7
Sc21g0005700 Simmondsia chinensis HOM05D007849 ORTHO05D009964 1.3e-15 88.2 101 42.6
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.1e-14 83.6 112 39.3
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.1e-14 83.6 112 40.2
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 1.6e-13 81.3 104 40.4
CBR_g22259 Chara braunii HOM05D007849 ORTHO05D009964 2.9e-12 77.0 161 31.7
Cpa.g.sc92.59 Carica papaya HOM05D000571 ORTHO05D000435 3.7e-07 60.1 162 29.6
PSO384G3258 Papaver somniferum HOM05D007849 ORTHO05D009964 8.3e-07 58.9 97 37.1
Rhsim06G0162800 Rhododendron simsii HOM05D000571 ORTHO05D000435 1.4e-06 58.2 142 29.6
TAR546G0004 Trochodendron aralioides HOM05D000571 ORTHO05D000435 1.8e-06 57.8 122 32.8
Aa31LG9G770 Aethionema arabicum HOM05D000571 ORTHO05D000435 3.2e-06 57.0 145 29.7
Zm00001eb197970 Zea mays HOM05D000571 ORTHO05D000435 3.2e-06 57.0 131 33.6
Ah.02g123780 Amaranthus hybridus HOM05D000571 ORTHO05D000435 4.1e-06 56.6 185 25.9
ECA247G4100 Erigeron canadensis HOM05D000571 ORTHO05D000435 5.4e-06 56.2 130 32.3
Sed0018048 Sechium edule HOM05D000571 ORTHO05D000435 5.4e-06 56.2 122 32.8
Ah.02g123790 Amaranthus hybridus HOM05D000571 ORTHO05D000435 7.0e-06 55.8 93 37.6
MELO3C026803.2 Cucumis melo HOM05D000571 ORTHO05D000435 9.2e-06 55.5 126 31.7
CsaV3_4G031730 Cucumis sativus L. HOM05D000571 ORTHO05D000435 9.2e-06 55.5 126 31.7
Os05g0436900 Oryza sativa ssp. japonica HOM05D000571 ORTHO05D000435 9.2e-06 55.5 163 28.8
Sc06g0003460 Simmondsia chinensis HOM05D005874 ORTHO05D007206 9.2e-06 55.5 238 21.8


User provided reference genes

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