Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2267 Utricularia gibba HOM05D005751 ORTHO05D007198 5.3e-153 544.3 265 100.0
MSTRG.19491 Avicennia marina HOM05D005751 ORTHO05D007198 4.0e-52 209.1 229 52.8
Migut.J00571 Erythranthe guttata HOM05D005751 ORTHO05D007198 2.0e-51 206.8 228 50.0
CSS0015550 Camellia sinensis var. sinensis HOM05D005751 ORTHO05D007198 9.9e-51 204.5 231 50.6
Manes.16G099500 Manihot esculenta HOM05D005751 ORTHO05D007198 2.2e-50 203.4 227 51.5
Actinidia39706 Actinidia chinensis HOM05D005751 ORTHO05D007198 2.9e-50 203.0 227 50.2
Nitab4.5_0001519g0150 Nicotiana tabacum HOM05D005751 ORTHO05D007198 8.4e-50 201.4 226 51.3
SGA_v2.0_scaffold91G28064 Striga asiatica HOM05D005751 ORTHO05D007198 8.4e-50 201.4 235 50.2
Cpa.g.sc28.129 Carica papaya HOM05D005751 ORTHO05D007198 2.4e-49 199.9 96 93.8
Dinv36789 Davidia involucrata HOM05D005751 ORTHO05D007198 3.2e-49 199.5 96 92.7
Duzib168G1813 Durio zibethinus HOM05D005751 ORTHO05D007198 3.2e-49 199.5 106 85.8
Gohir.A06G073900 Gossypium hirsutum HOM05D005751 ORTHO05D007198 3.2e-49 199.5 96 92.7
EL10Ac8g19167 Beta vulgaris HOM05D005751 ORTHO05D007198 4.2e-49 199.1 96 92.7
VMungo1215G3373 Vigna mungo HOM05D005751 ORTHO05D007198 4.2e-49 199.1 96 93.8
BcaC04g20019 Brassica carinata HOM05D005751 ORTHO05D007198 5.4e-49 198.7 96 93.8
BolC9t57719H Brassica oleracea HOM05D005751 ORTHO05D007198 5.4e-49 198.7 96 93.8
BraA10t43528Z Brassica rapa HOM05D005751 ORTHO05D007198 5.4e-49 198.7 96 93.8
Thhalv10014727m.g Eutrema salsugineum HOM05D005751 ORTHO05D007198 5.4e-49 198.7 96 93.8
Aa31LG3G12940 Aethionema arabicum HOM05D005751 ORTHO05D007198 7.1e-49 198.4 96 91.7
Duzib150G0581 Durio zibethinus HOM05D005751 ORTHO05D007198 7.1e-49 198.4 96 92.7
Gohir.D06G072800 Gossypium hirsutum HOM05D005751 ORTHO05D007198 9.3e-49 198.0 96 91.7
Oeu051302.1 Olea europaea HOM05D005751 ORTHO05D007198 9.3e-49 198.0 227 50.2
AL8G32950 Arabidopsis lyrata HOM05D005751 ORTHO05D007198 1.2e-48 197.6 96 92.7
AT5G57040 Arabidopsis thaliana HOM05D005751 ORTHO05D007198 1.2e-48 197.6 96 92.7
BcaB01g04441 Brassica carinata HOM05D005751 ORTHO05D007198 1.2e-48 197.6 96 92.7
Carub.0008s1755 Capsella rubella HOM05D005751 ORTHO05D007198 1.2e-48 197.6 96 92.7
Nitab4.5_0006861g0030 Nicotiana tabacum HOM05D005751 ORTHO05D007198 1.2e-48 197.6 227 50.2
Prupe.7G205300 Prunus persica HOM05D005751 ORTHO05D007198 1.2e-48 197.6 96 91.7
Ca_21296_v3 Cicer arietinum L. HOM05D005751 ORTHO05D007198 1.6e-48 197.2 96 91.7
GSVIVG01015161001 Vitis vinifera HOM05D005751 ORTHO05D007198 1.6e-48 197.2 228 50.0
A03p13000 Brassica napus HOM05D005751 ORTHO05D007198 2.1e-48 196.8 105 85.7
Hma1.2p1_0169F.1_g074820 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 2.1e-48 196.8 96 91.7
Hma1.2p1_0169F.1_g074830 Hydrangea macrophylla HOM05D005751 ORTHO05D007198 2.1e-48 196.8 96 91.7
Medtr4g125860 Medicago truncatula HOM05D005751 ORTHO05D007198 2.1e-48 196.8 96 90.6
Thecc.09G083800 Theobroma cacao HOM05D005751 ORTHO05D007198 2.1e-48 196.8 96 92.7
BcaB08g36014 Brassica carinata HOM05D005751 ORTHO05D007198 2.7e-48 196.4 96 91.7
A10p14370 Brassica napus HOM05D005751 ORTHO05D007198 2.7e-48 196.4 96 92.7
DCAR_028277 Daucus carota HOM05D005751 ORTHO05D007198 2.7e-48 196.4 96 91.7
ECA234G1336 Erigeron canadensis HOM05D005751 ORTHO05D007198 2.7e-48 196.4 96 91.7
QL02p061913 Quercus lobata HOM05D005751 ORTHO05D007198 2.7e-48 196.4 96 92.7
Solyc07g040950.3 Solanum lycopersicum HOM05D005751 ORTHO05D007198 2.7e-48 196.4 96 91.7
Sopen07g020020 Solanum pennellii HOM05D005751 ORTHO05D007198 2.7e-48 196.4 96 91.7
AUR62009007 Chenopodium quinoa HOM05D005751 ORTHO05D007198 3.5e-48 196.1 96 90.6
AUR62023295 Chenopodium quinoa HOM05D005751 ORTHO05D007198 3.5e-48 196.1 96 90.6
AUR62044275 Chenopodium quinoa HOM05D005751 ORTHO05D007198 3.5e-48 196.1 96 90.6
MELO3C015494.2 Cucumis melo HOM05D005751 ORTHO05D007198 3.5e-48 196.1 96 90.6
Sp6g18760 Schrenkiella parvula HOM05D005751 ORTHO05D007198 3.5e-48 196.1 96 91.7
CAN.G235.10 Capsicum annuum HOM05D005751 ORTHO05D007198 4.6e-48 195.7 96 91.7
CARHR270800 Cardamine hirsuta HOM05D005751 ORTHO05D007198 4.6e-48 195.7 96 91.7
CiPaw.03G211900 Carya illinoinensis HOM05D005751 ORTHO05D007198 4.6e-48 195.7 96 91.7
Lj4g0012446 Lotus japonicus HOM05D005751 ORTHO05D007198 4.6e-48 195.7 96 91.7
Lalb_Chr12g0199911 Lupinus albus HOM05D005751 ORTHO05D007198 4.6e-48 195.7 96 90.6
Sed0022874 Sechium edule HOM05D005751 ORTHO05D007198 4.6e-48 195.7 96 90.6
TWI34G0035 Tripterygium wilfordii HOM05D005751 ORTHO05D007198 4.6e-48 195.7 96 90.6
BcaC01g06463 Brassica carinata HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 91.7
C03p15170 Brassica napus HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 91.7
BolC3t13958H Brassica oleracea HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 91.7
BraA03t10610Z Brassica rapa HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 91.7
COL.COLO4_18163 Corchorus olitorius HOM05D005751 ORTHO05D007198 6.0e-48 195.3 99 87.9
CsaV3_1G040650 Cucumis sativus L. HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 89.6
Peaxi162Scf00494g00510 Petunia axillaris HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 91.7
Sabra06G0116100 Salix brachista HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 91.7
Hund08697 Selenicereus undatus HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 91.7
PGSC0003DMG400010712 Solanum tuberosum HOM05D005751 ORTHO05D007198 6.0e-48 195.3 96 90.6
CANSAT56G3008 Cannabis sativa HOM05D005751 ORTHO05D007198 7.8e-48 194.9 96 89.6
ClCG03G015400 Citrullus lanatus HOM05D005751 ORTHO05D007198 7.8e-48 194.9 96 89.6
Cc06_g11700 Coffea canephora HOM05D005751 ORTHO05D007198 7.8e-48 194.9 96 91.7
HanXRQChr12g0354491 Helianthus annuus HOM05D005751 ORTHO05D007198 7.8e-48 194.9 96 90.6
Ciclev10009538m.g Citrus clementina HOM05D005751 ORTHO05D007198 1.3e-47 194.1 96 90.6
Lsat_1_v5_gn_5_143221 Lactuca sativa HOM05D005751 ORTHO05D007198 1.3e-47 194.1 96 90.6
MD15G1211500 Malus domestica HOM05D005751 ORTHO05D007198 1.7e-47 193.7 96 90.6
Cfa003053 Carpinus fangiana HOM05D005751 ORTHO05D007198 2.3e-47 193.4 96 91.7
Phvul.003G134400 Phaseolus vulgaris HOM05D005751 ORTHO05D007198 2.3e-47 193.4 96 90.6
Potri.018G056200 Populus trichocarpa HOM05D005751 ORTHO05D007198 3.0e-47 193.0 96 89.6
Rhsim05G0015000 Rhododendron simsii HOM05D005751 ORTHO05D007198 3.0e-47 193.0 229 48.0
Aqoxy7G04004 Aquilegia oxysepala HOM05D005751 ORTHO05D007198 3.9e-47 192.6 96 91.7
Ah.09g227980 Amaranthus hybridus HOM05D005751 ORTHO05D007198 8.7e-47 191.4 97 86.6
Eucgr.C03409 Eucalyptus grandis HOM05D005751 ORTHO05D007198 8.7e-47 191.4 96 89.6
Sc18g0002310 Simmondsia chinensis HOM05D005751 ORTHO05D007198 8.7e-47 191.4 96 88.5
THA.LOC104811753 Tarenaya hassleriana HOM05D005751 ORTHO05D007198 1.1e-46 191.0 96 86.5
Haze_25944 Corylus avellana HOM05D005751 ORTHO05D007198 1.9e-46 190.3 96 90.6
Glyma.13G106600 Glycine max HOM05D005751 ORTHO05D007198 1.9e-46 190.3 96 88.5
Glyma.17G052700 Glycine max HOM05D005751 ORTHO05D007198 1.9e-46 190.3 96 88.5
TAR624G1021 Trochodendron aralioides HOM05D005751 ORTHO05D007198 1.9e-46 190.3 95 89.5
arahy.Tifrunner.gnm1.ann1.9N5J50 Arachis hypogaea HOM05D005751 ORTHO05D007198 2.5e-46 189.9 96 88.5
arahy.Tifrunner.gnm1.ann1.ZDQ9N1 Arachis hypogaea HOM05D005751 ORTHO05D007198 2.5e-46 189.9 96 88.5
SalBow6G2198 Salvia bowleyana HOM05D005751 ORTHO05D007198 4.3e-46 189.1 103 84.5
PSO210G7392 Papaver somniferum HOM05D005751 ORTHO05D007198 7.3e-46 188.3 96 86.5
vmacro17149 Vaccinium macrocarpon HOM05D005751 ORTHO05D007198 9.6e-46 188.0 97 86.6
ATR1153G002 Amborella trichopoda HOM05D005751 ORTHO05D007198 1.6e-45 187.2 96 86.5
FvH4_1g07980 Fragaria vesca HOM05D005751 ORTHO05D007198 1.6e-45 187.2 97 85.6
PSO210G0920 Papaver somniferum HOM05D005751 ORTHO05D007198 1.6e-45 187.2 96 85.4
Zm00001eb032820 Zea mays HOM05D005751 ORTHO05D007198 1.8e-44 183.7 96 85.4
VMungo1215G1838 Vigna mungo HOM05D005751 ORTHO05D007198 2.4e-44 183.3 96 84.4
HPP92_020002 Vanilla planifolia HOM05D005751 ORTHO05D007198 3.1e-44 183.0 96 85.4
Os07g0160400 Oryza sativa ssp. japonica HOM05D005751 ORTHO05D007198 6.9e-44 181.8 96 83.3
PGR102G3219 Punica granatum HOM05D005751 ORTHO05D007198 9.0e-44 181.4 96 83.3
CDE02G0045 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 1.3e-42 177.6 96 82.3
CBR_g3298 Chara braunii HOM05D005751 ORTHO05D007198 2.7e-40 169.9 96 76.0
Mapoly0070s0082 Marchantia polymorpha HOM05D005751 ORTHO05D007198 1.0e-39 167.9 96 75.0
SMO356G0241 Selaginella moellendorffii HOM05D005751 ORTHO05D007198 1.3e-39 167.5 96 76.0
Pp3c3_33270 Physcomitrium patens HOM05D005751 ORTHO05D007198 3.7e-37 159.5 98 71.4
Pp3c4_10740 Physcomitrium patens HOM05D005751 ORTHO05D007198 1.2e-35 154.5 98 72.4
Psat0s1725g0120 Pisum sativum HOM05D005751 ORTHO05D007198 1.7e-34 150.6 75 86.7
Cre10.g466500 Chlamydomonas reinhardtii HOM05D005751 ORTHO05D007198 2.9e-34 149.8 93 68.8
PRCOL_00003968 Prasinoderma coloniale HOM05D005751 ORTHO05D007198 1.4e-33 147.5 107 59.8
Atru.chr7.1637 Acer truncatum HOM05D005751 ORTHO05D007198 7.1e-33 145.2 70 91.4
Gorai.010G084800 Gossypium raimondii HOM05D005751 ORTHO05D007198 7.1e-33 145.2 69 89.9
MD02G1084200 Malus domestica HOM05D005751 ORTHO05D007198 7.9e-32 141.7 83 79.5
AagrBONN_evm.TU.Sc2ySwM_228.5761 Anthoceros agrestis HOM05D005751 ORTHO05D007198 1.3e-31 141.0 95 64.2
C09p48710 Brassica napus HOM05D005751 ORTHO05D007198 2.3e-31 140.2 66 90.9
Gohir.A07G143100 Gossypium hirsutum HOM05D005751 ORTHO05D007198 2.3e-31 140.2 70 84.3
RcHm_v2.0_Chr2g0093891 Rosa chinensis HOM05D005751 ORTHO05D007198 3.0e-31 139.8 69 87.0
RcHm_v2.0_Chr2g0094011 Rosa chinensis HOM05D005751 ORTHO05D007198 3.0e-31 139.8 69 87.0
MBI05_g15475_MAGBIO Magnolia biondii HOM05D005751 ORTHO05D007198 6.7e-31 138.7 71 87.3
FAN23G0534 Fragaria x ananassa HOM05D005751 ORTHO05D007198 8.7e-31 138.3 97 69.1
FAN26G0267 Fragaria x ananassa HOM05D005751 ORTHO05D007198 8.7e-31 138.3 97 69.1
FAN26G0888 Fragaria x ananassa HOM05D005751 ORTHO05D007198 8.7e-31 138.3 97 69.1
MCO05G344 Micromonas commoda HOM05D005751 ORTHO05D007198 8.7e-31 138.3 98 61.2
TPR.G20403 Trifolium pratense HOM05D005751 ORTHO05D007198 9.6e-30 134.8 62 91.9
SEGI_26166 Sequoiadendron giganteum HOM05D005751 ORTHO05D007198 2.2e-26 123.6 67 77.6
CDE04G1502 Ceratophyllum demersum HOM05D005751 ORTHO05D007198 2.9e-26 123.2 71 77.5
FAN19G0250 Fragaria x ananassa HOM05D005751 ORTHO05D007198 2.9e-26 123.2 58 89.7
Mapoly0078s0028 Marchantia polymorpha HOM05D005751 ORTHO05D007198 4.2e-25 119.4 98 56.1
Mapoly0083s0052 Marchantia polymorpha HOM05D005751 ORTHO05D007198 2.7e-24 116.7 96 56.2
Nn6g35546 Nelumbo nucifera HOM05D005751 ORTHO05D007198 3.9e-23 112.8 59 84.7
BcaNung07292 Brassica carinata HOM05D005751 ORTHO05D007198 2.4e-20 103.6 78 64.1
AUR62029026 Chenopodium quinoa HOM05D005751 ORTHO05D007198 1.5e-19 100.9 51 84.3
FAN28G0463 Fragaria x ananassa HOM05D005751 ORTHO05D007198 1.4e-15 87.8 44 84.1
Gohir.A03G138566 Gossypium hirsutum HOM05D005751 ORTHO05D007198 1.3e-13 81.3 45 75.6
unitig_52.g17399 Utricularia gibba HOM05D003129 ORTHO05D004326 4.2e-09 66.2 36 86.1
MSTRG.14212 Avicennia marina HOM05D003129 ORTHO05D004326 7.4e-06 55.5 41 65.9


User provided reference genes

Program Settings