Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 8.2e-171 603.6 298 100.0
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.5e-127 459.1 300 74.0
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 2.1e-126 456.1 299 74.6
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 3.6e-126 455.3 300 73.7
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 8.9e-125 450.7 299 73.2
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 2.0e-124 449.5 299 72.9
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 3.4e-124 448.7 294 76.9
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 1.7e-123 446.4 297 75.1
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 3.5e-121 438.7 299 71.6
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 7.8e-121 437.6 300 71.0
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 1.7e-120 436.4 298 71.1
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 6.6e-120 434.5 299 70.9
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 2.5e-119 432.6 299 69.6
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 3.3e-119 432.2 298 69.5
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 3.3e-119 432.2 298 69.5
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 1.5e-116 423.3 296 72.0
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 7.6e-116 421.0 298 70.8
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 3.2e-114 415.6 300 68.3
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 5.4e-114 414.8 301 67.4
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 3.5e-113 412.1 300 67.7
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.7e-112 409.8 296 68.9
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 6.6e-112 407.9 301 68.1
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 1.5e-111 406.8 301 67.8
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 4.8e-110 401.7 283 70.0
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 6.2e-110 401.4 295 66.4
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 8.1e-110 401.0 301 66.1
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 1.1e-109 400.6 283 70.7
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.2e-108 397.1 294 65.3
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 3.4e-108 395.6 296 65.9
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 7.6e-108 394.4 289 66.8
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 6.4e-107 391.3 295 65.1
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 1.4e-106 390.2 300 63.7
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 1.9e-106 389.8 302 65.2
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 2.4e-106 389.4 296 65.2
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 2.4e-106 389.4 302 64.9
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 3.2e-106 389.0 300 66.3
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 4.2e-106 388.7 295 65.8
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 2.1e-105 386.3 295 66.8
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 3.5e-105 385.6 288 65.3
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.5e-105 385.6 294 66.3
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 3.5e-105 385.6 294 66.3
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 3.5e-105 385.6 302 64.2
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.3e-104 383.6 296 66.2
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.7e-104 383.3 295 66.1
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 1.7e-104 383.3 301 65.4
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.9e-104 382.1 294 66.0
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 3.9e-104 382.1 302 64.2
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 8.7e-104 380.9 293 65.5
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 1.1e-103 380.6 289 66.1
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 1.1e-103 380.6 297 65.7
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.5e-103 380.2 296 65.2
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 1.5e-103 380.2 298 64.1
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.9e-103 379.8 293 65.2
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 2.5e-103 379.4 296 64.9
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 2.5e-103 379.4 298 67.1
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 3.3e-103 379.0 294 65.6
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 3.3e-103 379.0 290 65.5
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 3.3e-103 379.0 290 65.9
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 4.3e-103 378.6 293 65.2
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 4.3e-103 378.6 297 66.0
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 7.4e-103 377.9 301 65.8
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 7.4e-103 377.9 293 64.8
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.6e-103 377.5 293 64.8
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.3e-102 377.1 301 63.1
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 1.3e-102 377.1 288 65.3
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 2.1e-102 376.3 295 65.1
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 2.8e-102 375.9 294 64.6
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 2.8e-102 375.9 301 64.1
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 3.6e-102 375.6 301 65.4
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 3.6e-102 375.6 298 64.4
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 3.6e-102 375.6 296 64.2
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.8e-102 375.2 296 63.9
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.8e-102 375.2 296 63.9
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 4.8e-102 375.2 288 64.9
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 4.8e-102 375.2 294 64.6
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 6.2e-102 374.8 297 65.0
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 6.2e-102 374.8 296 64.9
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 6.2e-102 374.8 293 64.5
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 8.1e-102 374.4 297 65.0
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 8.1e-102 374.4 288 64.2
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 1.1e-101 374.0 297 65.0
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 1.1e-101 374.0 294 66.3
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 1.4e-101 373.6 293 64.8
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.4e-101 373.6 295 65.4
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 2.4e-101 372.9 297 65.3
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 2.4e-101 372.9 292 63.7
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 2.4e-101 372.9 296 64.2
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 3.1e-101 372.5 294 63.3
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 4.0e-101 372.1 294 63.6
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 5.3e-101 371.7 294 63.6
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 6.9e-101 371.3 288 64.2
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 1.5e-100 370.2 287 64.1
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 2.6e-100 369.4 294 64.3
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 3.4e-100 369.0 298 63.4
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 3.4e-100 369.0 296 63.5
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 1.7e-99 366.7 293 60.8
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 2.2e-99 366.3 297 63.6
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 2.9e-99 365.9 297 63.6
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 3.8e-99 365.5 294 64.3
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 3.8e-99 365.5 292 63.0
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 4.9e-99 365.2 294 64.3
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 4.9e-99 365.2 294 64.3
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 6.4e-99 364.8 294 64.3
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 8.4e-99 364.4 294 63.9
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.1e-98 364.0 300 61.7
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 1.1e-98 364.0 294 63.9
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 1.1e-98 364.0 297 63.0
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 1.1e-98 364.0 297 63.0
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.9e-98 363.2 294 63.9
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 1.9e-98 363.2 294 63.6
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 1.9e-98 363.2 294 63.9
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 1.9e-98 363.2 294 63.6
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.2e-98 362.5 295 63.4
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 5.5e-98 361.7 294 63.3
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 5.5e-98 361.7 294 63.3
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 5.5e-98 361.7 294 63.3
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 5.5e-98 361.7 280 67.5
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 5.5e-98 361.7 294 63.6
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 7.1e-98 361.3 295 63.1
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 9.3e-98 360.9 294 63.6
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 2.1e-97 359.8 280 67.1
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 3.5e-97 359.0 285 64.6
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 4.6e-97 358.6 302 61.3
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 2.3e-96 356.3 279 66.3
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 2.3e-96 356.3 287 62.7
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 8.7e-96 354.4 284 62.3
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 1.4e-93 347.1 290 63.4
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 1.2e-92 344.0 304 60.5
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 2.0e-92 343.2 300 60.7
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 2.6e-92 342.8 290 62.8
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 3.4e-92 342.4 294 58.8
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.7e-91 340.1 291 62.9
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 3.8e-91 339.0 296 59.8
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 1.4e-90 337.0 287 60.3
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 4.2e-90 335.5 313 56.9
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 3.5e-89 332.4 300 60.3
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 4.6e-89 332.0 250 66.0
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 1.0e-88 330.9 313 58.1
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 3.9e-88 328.9 313 57.8
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 1.1e-87 327.4 316 56.3
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 1.5e-87 327.0 302 57.6
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 5.3e-85 318.5 295 57.6
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 5.0e-83 312.0 258 61.6
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 1.4e-77 293.9 298 54.4
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 2.2e-70 270.0 219 64.8
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 3.7e-70 269.2 272 51.8
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 6.9e-69 265.0 197 66.5
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 1.5e-63 247.3 281 50.5
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 1.3e-62 244.2 268 49.6
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 9.1e-61 238.0 259 49.8
CAN.G162.92 Capsicum annuum HOM05D004279 ORTHO05D004979 5.2e-56 222.2 142 72.5
HanXRQChr08g0235651 Helianthus annuus HOM05D004279 ORTHO05D004979 6.3e-54 215.3 169 62.7
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 6.3e-54 215.3 281 44.1
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 4.2e-50 202.6 271 45.4
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 2.0e-44 183.7 136 64.7
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 8.5e-43 178.3 128 66.4
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 3.2e-42 176.4 167 56.9
Atru.chr2.2813 Acer truncatum HOM05D004279 ORTHO05D004979 1.6e-28 131.0 100 60.0
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 1.2e-25 121.3 332 28.3
Haze_01531 Corylus avellana HOM05D004279 ORTHO05D004979 8.9e-24 115.2 113 55.8
QL06p019554 Quercus lobata HOM05D004279 ORTHO05D004979 3.4e-23 113.2 87 67.8
Haze_12044 Corylus avellana HOM05D004279 ORTHO05D004979 2.4e-21 107.1 113 53.1
Haze_10444 Corylus avellana HOM05D004279 ORTHO05D004979 5.0e-19 99.4 99 56.6
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 1.5e-10 71.2 56 57.1
Haze_13283 Corylus avellana HOM05D004279 ORTHO05D004979 2.8e-09 67.0 87 47.1
Haze_06332 Corylus avellana HOM05D004279 ORTHO05D004979 6.8e-08 62.4 73 49.3
SHI26932 Sapria himalayana HOM05D009124 ORTHO05D012381 2.9e-06 57.0 67 44.8


User provided reference genes

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