Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g223 Utricularia gibba HOM05D005604 ORTHO05D006745 4.4e-297 1023.8 511 100.0
unitig_60.g25697 Utricularia gibba HOM05D005604 ORTHO05D006745 5.0e-192 674.9 542 68.6
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 1.2e-169 600.5 541 61.0
Dinv19175 Davidia involucrata HOM05D005604 ORTHO05D006745 2.0e-169 599.7 555 62.2
Dinv12653 Davidia involucrata HOM05D005604 ORTHO05D006745 5.0e-168 595.1 556 62.2
MSTRG.18511 Avicennia marina HOM05D005604 ORTHO05D006745 1.5e-167 593.6 549 60.8
Migut.D00766 Erythranthe guttata HOM05D005604 ORTHO05D006745 5.6e-167 591.7 536 63.6
CSS0000075 Camellia sinensis var. sinensis HOM05D005604 ORTHO05D006745 1.5e-164 583.6 558 60.2
Nitab4.5_0009005g0020 Nicotiana tabacum HOM05D005604 ORTHO05D006745 4.6e-161 572.0 538 59.7
Potri.002G245700 Populus trichocarpa HOM05D005604 ORTHO05D006745 1.3e-160 570.5 555 59.3
QL09p051278 Quercus lobata HOM05D005604 ORTHO05D006745 2.3e-160 569.7 554 58.7
Sopen06g034740 Solanum pennellii HOM05D005604 ORTHO05D006745 1.1e-159 567.4 539 60.1
Solyc06g083370.3 Solanum lycopersicum HOM05D005604 ORTHO05D006745 4.3e-159 565.5 539 59.9
PGSC0003DMG400020164 Solanum tuberosum HOM05D005604 ORTHO05D006745 2.8e-158 562.8 539 59.7
Prupe.8G199200 Prunus persica HOM05D005604 ORTHO05D006745 4.7e-158 562.0 558 59.5
Cpa.g.sc43.114 Carica papaya HOM05D005604 ORTHO05D006745 8.0e-158 561.2 547 59.2
Rhsim13G0047500 Rhododendron simsii HOM05D005604 ORTHO05D006745 1.8e-157 560.1 559 57.8
DCAR_004740 Daucus carota HOM05D005604 ORTHO05D006745 6.8e-157 558.1 539 58.8
Actinidia39432 Actinidia chinensis HOM05D005604 ORTHO05D006745 8.9e-157 557.8 564 58.0
Solyc09g059470.4 Solanum lycopersicum HOM05D005604 ORTHO05D006745 8.9e-157 557.8 550 58.5
PGSC0003DMG400027951 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.2e-156 557.4 550 58.9
Sopen09g022640 Solanum pennellii HOM05D005604 ORTHO05D006745 1.5e-156 557.0 550 58.4
CiPaw.01G050300 Carya illinoinensis HOM05D005604 ORTHO05D006745 7.5e-156 554.7 569 57.6
Eucgr.K02139 Eucalyptus grandis HOM05D005604 ORTHO05D006745 2.0e-153 546.6 553 58.2
RcHm_v2.0_Chr6g0284121 Rosa chinensis HOM05D005604 ORTHO05D006745 2.0e-153 546.6 563 58.1
COL.COLO4_15621 Corchorus olitorius HOM05D005604 ORTHO05D006745 2.7e-153 546.2 564 57.1
GSVIVG01003930001 Vitis vinifera HOM05D005604 ORTHO05D006745 2.7e-153 546.2 555 58.2
Atru.chr6.1423 Acer truncatum HOM05D005604 ORTHO05D006745 3.5e-153 545.8 566 58.0
Duzib138G1747 Durio zibethinus HOM05D005604 ORTHO05D006745 1.0e-152 544.3 559 56.7
MD10G1160100 Malus domestica HOM05D005604 ORTHO05D006745 1.0e-152 544.3 560 57.5
Nitab4.5_0003020g0080 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.3e-152 543.9 557 57.1
FAN27G1924 Fragaria x ananassa HOM05D005604 ORTHO05D006745 1.7e-152 543.5 563 56.3
MD05G1171800 Malus domestica HOM05D005604 ORTHO05D006745 1.7e-152 543.5 563 57.4
FvH4_2g18560 Fragaria vesca HOM05D005604 ORTHO05D006745 2.3e-152 543.1 563 57.4
Lj1A89T69 Lonicera japonica HOM05D005604 ORTHO05D006745 3.9e-152 542.3 599 55.4
Ciclev10019544m.g Citrus clementina HOM05D005604 ORTHO05D006745 5.0e-152 542.0 563 57.2
Thecc.01G220400 Theobroma cacao HOM05D005604 ORTHO05D006745 5.0e-152 542.0 558 57.0
FAN15G1583 Fragaria x ananassa HOM05D005604 ORTHO05D006745 6.6e-152 541.6 563 57.5
FAN24G1841 Fragaria x ananassa HOM05D005604 ORTHO05D006745 6.6e-152 541.6 563 56.5
CAN.G874.4 Capsicum annuum HOM05D005604 ORTHO05D006745 1.1e-151 540.8 547 57.4
Actinidia30055 Actinidia chinensis HOM05D005604 ORTHO05D006745 9.5e-151 537.7 523 60.0
ClCG09G008600 Citrullus lanatus HOM05D005604 ORTHO05D006745 9.5e-151 537.7 561 58.1
HanXRQChr04g0108051 Helianthus annuus HOM05D005604 ORTHO05D006745 2.1e-150 536.6 548 58.0
TWI36G0921 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 1.4e-149 533.9 561 57.6
CiPaw.02G023400 Carya illinoinensis HOM05D005604 ORTHO05D006745 5.8e-148 528.5 557 56.2
Sed0019682 Sechium edule HOM05D005604 ORTHO05D006745 5.8e-148 528.5 561 57.2
DCAR_012669 Daucus carota HOM05D005604 ORTHO05D006745 7.5e-148 528.1 556 54.0
TAR362G0631 Trochodendron aralioides HOM05D005604 ORTHO05D006745 7.5e-148 528.1 562 54.6
CsaV3_7G026370 Cucumis sativus L. HOM05D005604 ORTHO05D006745 9.8e-148 527.7 565 57.3
Duzib133G0023 Durio zibethinus HOM05D005604 ORTHO05D006745 1.7e-147 526.9 558 55.9
Gohir.A07G199300 Gossypium hirsutum HOM05D005604 ORTHO05D006745 2.2e-147 526.6 558 54.1
VMungo1383G0872 Vigna mungo HOM05D005604 ORTHO05D006745 2.9e-147 526.2 557 56.4
CANSAT01G1141 Cannabis sativa HOM05D005604 ORTHO05D006745 4.9e-147 525.4 568 54.8
Gorai.001G231700 Gossypium raimondii HOM05D005604 ORTHO05D006745 6.4e-147 525.0 558 54.3
Gohir.D07G205700 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.1e-146 524.2 558 54.3
MELO3C021083.2 Cucumis melo HOM05D005604 ORTHO05D006745 1.4e-146 523.9 564 56.9
Glyma.18G167400 Glycine max HOM05D005604 ORTHO05D006745 4.1e-146 522.3 557 58.0
TWI18G0325 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 9.2e-146 521.2 567 57.3
Ah.15g093490 Amaranthus hybridus HOM05D005604 ORTHO05D006745 1.2e-145 520.8 589 53.0
Cc01_g16720 Coffea canephora HOM05D005604 ORTHO05D006745 1.2e-145 520.8 556 56.3
Psat3g148680 Pisum sativum HOM05D005604 ORTHO05D006745 1.6e-145 520.4 555 55.5
vmacro02782 Vaccinium macrocarpon HOM05D005604 ORTHO05D006745 1.6e-145 520.4 610 50.8
Glyma.08G349100 Glycine max HOM05D005604 ORTHO05D006745 3.5e-145 519.2 561 56.5
AUR62001131 Chenopodium quinoa HOM05D005604 ORTHO05D006745 2.3e-144 516.5 583 53.7
AUR62016550 Chenopodium quinoa HOM05D005604 ORTHO05D006745 2.3e-144 516.5 580 53.6
TAR633G2144 Trochodendron aralioides HOM05D005604 ORTHO05D006745 3.0e-144 516.2 561 55.1
Medtr7g056243 Medicago truncatula HOM05D005604 ORTHO05D006745 3.3e-143 512.7 541 55.1
Haze_15255 Corylus avellana HOM05D005604 ORTHO05D006745 1.4e-141 507.3 642 50.8
Lj1g0022594 Lotus japonicus HOM05D005604 ORTHO05D006745 8.9e-141 504.6 536 56.7
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea HOM05D005604 ORTHO05D006745 1.2e-140 504.2 547 56.3
PSO063G0087 Papaver somniferum HOM05D005604 ORTHO05D006745 3.4e-140 502.7 556 53.1
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea HOM05D005604 ORTHO05D006745 5.8e-140 501.9 553 55.9
Phvul.008G130900 Phaseolus vulgaris HOM05D005604 ORTHO05D006745 3.8e-139 499.2 545 55.6
MBI07_g18990_MAGBIO Magnolia biondii HOM05D005604 ORTHO05D006745 8.4e-139 498.0 557 54.2
PSO017G3308 Papaver somniferum HOM05D005604 ORTHO05D006745 8.4e-139 498.0 556 52.7
ECA236G4946 Erigeron canadensis HOM05D005604 ORTHO05D006745 1.1e-138 497.7 507 57.0
THA.LOC104822492 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 5.4e-138 495.4 565 52.4
Lsat_1_v5_gn_8_89380 Lactuca sativa HOM05D005604 ORTHO05D006745 2.3e-136 490.0 544 55.9
Aa31LG5G17790 Aethionema arabicum HOM05D005604 ORTHO05D006745 3.9e-136 489.2 549 53.0
CARHR081860 Cardamine hirsuta HOM05D005604 ORTHO05D006745 6.6e-136 488.4 561 54.0
PGR044G1204 Punica granatum HOM05D005604 ORTHO05D006745 5.6e-135 485.3 568 54.9
Carub.0003s0673 Capsella rubella HOM05D005604 ORTHO05D006745 4.7e-134 482.3 556 53.6
Thhalv10020454m.g Eutrema salsugineum HOM05D005604 ORTHO05D006745 4.7e-134 482.3 561 52.4
Lsat_1_v5_gn_9_15140 Lactuca sativa HOM05D005604 ORTHO05D006745 4.7e-134 482.3 549 54.5
EL10Ac7g17895 Beta vulgaris HOM05D005604 ORTHO05D006745 3.1e-133 479.6 586 50.3
AT3G07210 Arabidopsis thaliana HOM05D005604 ORTHO05D006745 4.0e-133 479.2 557 53.1
BcaC05g29746 Brassica carinata HOM05D005604 ORTHO05D006745 5.2e-133 478.8 550 52.2
AL3G18480 Arabidopsis lyrata HOM05D005604 ORTHO05D006745 2.0e-132 476.9 556 52.7
Lalb_Chr13g0291101 Lupinus albus HOM05D005604 ORTHO05D006745 2.0e-132 476.9 565 53.1
Sp3g06160 Schrenkiella parvula HOM05D005604 ORTHO05D006745 3.8e-131 472.6 557 52.2
THA.LOC104802659 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 1.4e-130 470.7 572 51.2
Aqoxy2G03983 Aquilegia oxysepala HOM05D005604 ORTHO05D006745 2.4e-130 469.9 565 51.5
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 8.7e-128 461.5 693 44.7
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.1e-127 461.1 697 43.9
HanXRQChr10g0279511 Helianthus annuus HOM05D005604 ORTHO05D006745 4.3e-127 459.1 531 52.4
Sabra02G0187000 Salix brachista HOM05D005604 ORTHO05D006745 9.6e-127 458.0 470 56.4
Peaxi162Scf01312g00047 Petunia axillaris HOM05D005604 ORTHO05D006745 1.6e-126 457.2 473 55.8
Peaxi162Scf00068g02416 Petunia axillaris HOM05D005604 ORTHO05D006745 2.8e-126 456.4 641 47.1
BraA05t22827Z Brassica rapa HOM05D005604 ORTHO05D006745 6.9e-125 451.8 566 50.5
BcaC05g29850 Brassica carinata HOM05D005604 ORTHO05D006745 1.2e-124 451.1 561 50.8
A05p41000 Brassica napus HOM05D005604 ORTHO05D006745 2.0e-124 450.3 566 50.4
C05p60150 Brassica napus HOM05D005604 ORTHO05D006745 2.0e-124 450.3 561 50.8
BolC5t34666H Brassica oleracea HOM05D005604 ORTHO05D006745 2.0e-124 450.3 561 50.8
ECA247G0587 Erigeron canadensis HOM05D005604 ORTHO05D006745 7.6e-124 448.4 502 54.0
ATR0561G172 Amborella trichopoda HOM05D005604 ORTHO05D006745 6.7e-120 435.3 568 47.7
Zm00001eb143450 Zea mays HOM05D005604 ORTHO05D006745 8.7e-120 434.9 566 48.4
HPP92_011784 Vanilla planifolia HOM05D005604 ORTHO05D006745 8.7e-112 408.3 549 47.5
Manes.13G049200 Manihot esculenta HOM05D005604 ORTHO05D006745 3.8e-107 392.9 456 52.4
Os01g0917200 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 1.6e-105 387.5 563 46.2
CDE05G2031 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 3.0e-104 383.3 537 45.4
Hund05575 Selenicereus undatus HOM05D005604 ORTHO05D006745 3.0e-104 383.3 579 43.7
Sc05g0001960 Simmondsia chinensis HOM05D005604 ORTHO05D006745 8.7e-104 381.7 362 60.2
Nn1g07990 Nelumbo nucifera HOM05D005604 ORTHO05D006745 4.5e-100 369.4 427 54.3
SGA_v2.0_scaffold158G37516 Striga asiatica HOM05D005604 ORTHO05D006745 2.5e-98 363.6 340 58.8
DCAR_004736 Daucus carota HOM05D005604 ORTHO05D006745 1.3e-94 351.3 420 53.3
Zm00001eb175070 Zea mays HOM05D005604 ORTHO05D006745 3.7e-78 296.6 547 39.1
Os08g0528800 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 1.3e-75 288.1 556 36.3
CAN.G1432.2 Capsicum annuum HOM05D005604 ORTHO05D006745 5.5e-66 256.1 477 40.0
CDE05G1628 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 1.2e-55 221.9 351 41.6
TPR.G6488 Trifolium pratense HOM05D005604 ORTHO05D006745 2.7e-52 210.7 318 45.9
SEGI_00167 Sequoiadendron giganteum HOM05D005604 ORTHO05D006745 1.0e-51 208.8 260 45.8
DCAR_026186 Daucus carota HOM05D005604 ORTHO05D006745 4.3e-34 150.2 449 31.6
Oeu057862.1 Olea europaea HOM05D005604 ORTHO05D006745 4.3e-26 123.6 84 72.6
ECA247G2712 Erigeron canadensis HOM05D005604 ORTHO05D006745 3.1e-24 117.5 156 50.0
Manes.12G047141 Manihot esculenta HOM05D005604 ORTHO05D006745 6.0e-20 103.2 86 62.8
Gohir.A05G304001 Gossypium hirsutum HOM05D005604 ORTHO05D006745 5.1e-19 100.1 112 50.9
TPR.G6487 Trifolium pratense HOM05D005604 ORTHO05D006745 9.6e-18 95.9 86 61.6
SMO117G0236 Selaginella moellendorffii HOM05D005604 ORTHO05D006745 1.6e-17 95.1 204 34.3
AagrBONN_evm.TU.Sc2ySwM_362.1199 Anthoceros agrestis HOM05D005604 ORTHO05D006745 2.1e-17 94.7 199 32.7
AagrBONN_evm.TU.Sc2ySwM_368.1401 Anthoceros agrestis HOM05D005604 ORTHO05D006745 2.1e-17 94.7 217 32.3
Hma1.2p1_1324F.1_g275630 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 6.2e-17 93.2 69 66.7
Mapoly0029s0037 Marchantia polymorpha HOM05D005604 ORTHO05D006745 1.5e-15 88.6 493 25.8
AagrBONN_evm.TU.Sc2ySwM_117.906 Anthoceros agrestis HOM05D005604 ORTHO05D006745 2.0e-15 88.2 216 30.6


User provided reference genes

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