Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2217 Utricularia gibba HOM05D007523 ORTHO05D009520 3.9e-103 378.3 206 100.0
Migut.E01344 Erythranthe guttata HOM05D007523 ORTHO05D009520 4.7e-32 142.1 171 56.7
MSTRG.1775 Avicennia marina HOM05D007523 ORTHO05D009520 3.7e-29 132.5 177 54.8
SalBow8G2402 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.5e-27 125.9 176 55.1
Oeu017333.1 Olea europaea HOM05D007523 ORTHO05D009520 2.9e-26 122.9 165 53.9
SGA_v2.0_scaffold96G29060 Striga asiatica HOM05D007523 ORTHO05D009520 5.0e-26 122.1 173 50.9
SalBow4G0950 Salvia bowleyana HOM05D007523 ORTHO05D009520 3.3e-25 119.4 157 53.5
Cc08_g04400 Coffea canephora HOM05D007523 ORTHO05D009520 3.0e-23 112.8 177 45.8
Migut.A00547 Erythranthe guttata HOM05D007523 ORTHO05D009520 5.2e-23 112.1 186 45.2
Potri.001G132400 Populus trichocarpa HOM05D007523 ORTHO05D009520 6.8e-23 111.7 175 48.6
BolC7t45523H Brassica oleracea HOM05D007523 ORTHO05D009520 3.7e-21 105.9 125 61.6
Sabra01G0102200 Salix brachista HOM05D007523 ORTHO05D009520 3.7e-21 105.9 173 48.0
C07p50210 Brassica napus HOM05D000137 ORTHO05D002305 1.1e-20 104.4 109 68.8
A03p51710 Brassica napus HOM05D000137 ORTHO05D002305 1.8e-20 103.6 109 68.8
CSS0001694 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.8e-20 103.6 172 48.8
CARHR225970 Cardamine hirsuta HOM05D007523 ORTHO05D009520 3.2e-20 102.8 163 50.3
Rhsim11G0026000 Rhododendron simsii HOM05D007523 ORTHO05D009520 3.2e-20 102.8 79 77.2
BraA03t14258Z Brassica rapa HOM05D000452 ORTHO05D000647 4.1e-20 102.4 109 67.9
Manes.17G008000 Manihot esculenta HOM05D007523 ORTHO05D009520 4.1e-20 102.4 139 55.4
Duzib248G0934 Durio zibethinus HOM05D007523 ORTHO05D009520 5.4e-20 102.1 169 46.2
vmacro00070 Vaccinium macrocarpon HOM05D007523 ORTHO05D009520 7.0e-20 101.7 125 57.6
CSS0003197 Camellia sinensis var. sinensis HOM05D007523 ORTHO05D009520 1.2e-19 100.9 166 48.8
Dinv28021 Davidia involucrata HOM05D007523 ORTHO05D009520 1.2e-19 100.9 115 64.3
PSO675G0835 Papaver somniferum HOM05D007523 ORTHO05D009520 1.6e-19 100.5 83 80.7
Atru.chr6.1496 Acer truncatum HOM05D007523 ORTHO05D009520 2.0e-19 100.1 172 48.3
BcaNung03083 Brassica carinata HOM05D007523 ORTHO05D009520 2.0e-19 100.1 102 70.6
TAR629G3055 Trochodendron aralioides HOM05D007523 ORTHO05D009520 2.0e-19 100.1 93 72.0
BcaC06g30615 Brassica carinata HOM05D007523 ORTHO05D009520 2.7e-19 99.8 104 69.2
Carub.0007s2207 Capsella rubella HOM05D007523 ORTHO05D009520 2.7e-19 99.8 164 51.2
HanXRQChr03g0082201 Helianthus annuus HOM05D007523 ORTHO05D009520 2.7e-19 99.8 91 74.7
PSO675G0851 Papaver somniferum HOM05D007523 ORTHO05D009520 2.7e-19 99.8 83 79.5
Thecc.02G365300 Theobroma cacao HOM05D007523 ORTHO05D009520 2.7e-19 99.8 89 75.3
AL7G35030 Arabidopsis lyrata HOM05D007523 ORTHO05D009520 4.6e-19 99.0 102 68.6
Haze_08076 Corylus avellana HOM05D007523 ORTHO05D009520 6.0e-19 98.6 116 63.8
HPP92_012195 Vanilla planifolia HOM05D007523 ORTHO05D009520 7.8e-19 98.2 81 81.5
Peaxi162Scf00876g00434 Petunia axillaris HOM05D007523 ORTHO05D009520 1.0e-18 97.8 91 73.6
AT4G19070 Arabidopsis thaliana HOM05D007523 ORTHO05D009520 1.3e-18 97.4 91 74.7
Ciclev10002679m.g Citrus clementina HOM05D007523 ORTHO05D009520 1.3e-18 97.4 107 64.5
Thhalv10026426m.g Eutrema salsugineum HOM05D007523 ORTHO05D009520 1.7e-18 97.1 104 68.3
GSVIVG01026296001 Vitis vinifera HOM05D007523 ORTHO05D009520 2.3e-18 96.7 89 73.0
Sp7g17790 Schrenkiella parvula HOM05D007523 ORTHO05D005023 3.9e-18 95.9 104 67.3
ECA240G1522 Erigeron canadensis HOM05D007523 ORTHO05D009520 5.0e-18 95.5 89 73.0
CDE05G0732 Ceratophyllum demersum HOM05D007523 ORTHO05D009520 8.6e-18 94.7 83 78.3
THA.LOC104811020 Tarenaya hassleriana HOM05D007523 ORTHO05D009520 8.6e-18 94.7 117 60.7
VMungo0251G0133 Vigna mungo HOM05D007523 ORTHO05D009520 8.6e-18 94.7 88 72.7
Gohir.D12G176600 Gossypium hirsutum HOM05D007523 ORTHO05D009520 1.1e-17 94.4 165 46.1
Phvul.003G279400 Phaseolus vulgaris HOM05D007523 ORTHO05D009520 1.1e-17 94.4 77 77.9
Aqoxy4G00046 Aquilegia oxysepala HOM05D007523 ORTHO05D009520 1.5e-17 94.0 155 48.4
Cpa.g.sc355.1 Carica papaya HOM05D007523 ORTHO05D009520 1.9e-17 93.6 89 75.3
QL12p000900 Quercus lobata HOM05D007523 ORTHO05D009520 1.9e-17 93.6 174 45.4
Sc22g0001970 Simmondsia chinensis HOM05D007523 ORTHO05D009520 1.9e-17 93.6 150 51.3
RcHm_v2.0_Chr7g0213271 Rosa chinensis HOM05D007523 ORTHO05D009520 2.5e-17 93.2 173 46.2
TWI34G1559 Tripterygium wilfordii HOM05D007523 ORTHO05D009520 2.5e-17 93.2 169 43.8
EL10Ac5g11951 Beta vulgaris HOM05D007523 ORTHO05D009520 3.3e-17 92.8 79 81.0
Gorai.008G189000 Gossypium raimondii HOM05D007523 ORTHO05D009520 3.3e-17 92.8 89 73.0
Aa31LG6G1770 Aethionema arabicum HOM05D007523 ORTHO05D005023 4.3e-17 92.4 114 61.4
Prupe.5G021500 Prunus persica HOM05D007523 ORTHO05D009520 4.3e-17 92.4 114 59.6
ATR1098G100 Amborella trichopoda HOM05D007523 ORTHO05D009520 5.6e-17 92.0 109 64.2
Gohir.A12G173966 Gossypium hirsutum HOM05D007523 ORTHO05D009520 5.6e-17 92.0 157 49.0
Nn1g02124 Nelumbo nucifera HOM05D007523 ORTHO05D009520 5.6e-17 92.0 93 67.7
CANSAT21G1314 Cannabis sativa HOM05D007523 ORTHO05D009520 7.3e-17 91.7 184 45.1
Ah.12g055890 Amaranthus hybridus HOM05D002287 ORTHO05D002588 9.5e-17 91.3 79 75.9
Glyma.16G104300 Glycine max HOM05D007523 ORTHO05D009520 1.2e-16 90.9 76 75.0
FAN18G0623 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.1e-16 90.1 182 43.4
FAN18G3486 Fragaria x ananassa HOM05D007523 ORTHO05D009520 2.1e-16 90.1 182 43.4
Lalb_Chr16g0392051 Lupinus albus HOM05D007523 ORTHO05D009520 2.1e-16 90.1 89 67.4
Nn3g19239 Nelumbo nucifera HOM05D007523 ORTHO05D009520 2.8e-16 89.7 80 73.8
AUR62007395 Chenopodium quinoa HOM05D002287 ORTHO05D009520 3.6e-16 89.4 77 79.2
Eucgr.D02602 Eucalyptus grandis HOM05D007523 ORTHO05D009520 3.6e-16 89.4 153 49.7
PGR031G0795 Punica granatum HOM05D007523 ORTHO05D009520 3.6e-16 89.4 176 44.3
AUR62027336 Chenopodium quinoa HOM05D007523 ORTHO05D009520 4.7e-16 89.0 81 77.8
FvH4_5g23880 Fragaria vesca HOM05D007523 ORTHO05D009520 8.0e-16 88.2 175 44.6
Lj4g0001215 Lotus japonicus HOM05D007523 ORTHO05D009520 1.1e-15 87.8 109 59.6
Solyc12g096090.2 Solanum lycopersicum HOM05D007523 ORTHO05D009520 1.1e-15 87.8 91 69.2
CsaV3_3G030330 Cucumis sativus L. HOM05D007523 ORTHO05D009520 1.4e-15 87.4 89 70.8
FAN04G1224 Fragaria x ananassa HOM05D007523 ORTHO05D009520 3.1e-15 86.3 110 61.8
CiPaw.11G102500 Carya illinoinensis HOM05D007523 ORTHO05D009520 4.0e-15 85.9 111 61.3
ClCG07G002350 Citrullus lanatus HOM05D007523 ORTHO05D009520 4.0e-15 85.9 91 69.2
MD06G1014600 Malus domestica HOM05D007523 ORTHO05D009520 4.0e-15 85.9 116 56.0
Nitab4.5_0006741g0030 Nicotiana tabacum HOM05D007523 ORTHO05D009520 4.0e-15 85.9 91 68.1
Nitab4.5_0000943g0130 Nicotiana tabacum HOM05D007523 ORTHO05D009520 5.2e-15 85.5 91 68.1
Os07g0143600 Oryza sativa ssp. japonica HOM05D007523 ORTHO05D009520 6.8e-15 85.1 86 70.9
Sopen12g031980 Solanum pennellii HOM05D007523 ORTHO05D009520 1.2e-14 84.3 89 68.5
PGSC0003DMG400029292 Solanum tuberosum HOM05D007523 ORTHO05D009520 1.2e-14 84.3 89 67.4
MSTRG.11889 Avicennia marina HOM05D007523 ORTHO05D009520 1.5e-14 84.0 156 45.5
AagrBONN_evm.TU.Sc2ySwM_368.2556 Anthoceros agrestis HOM05D007523 ORTHO05D009520 3.4e-14 82.8 74 67.6
Sed0002333 Sechium edule HOM05D007523 ORTHO05D009520 4.4e-14 82.4 94 67.0
arahy.Tifrunner.gnm1.ann1.7DC73F Arachis hypogaea HOM05D007523 ORTHO05D009520 5.8e-14 82.0 92 63.0
Ca_22486_v3 Cicer arietinum L. HOM05D007523 ORTHO05D009520 5.8e-14 82.0 118 56.8
MBI18_g28211_MAGBIO Magnolia biondii HOM05D007523 ORTHO05D009520 9.8e-14 81.3 169 42.6
CAN.G947.41 Capsicum annuum HOM05D007523 ORTHO05D009520 1.3e-13 80.9 89 66.3
TPR.G31317 Trifolium pratense HOM05D007523 ORTHO05D009520 1.3e-13 80.9 177 43.5
arahy.Tifrunner.gnm1.ann1.19GUIE Arachis hypogaea HOM05D007523 ORTHO05D009520 1.7e-13 80.5 92 62.0
Mapoly0024s0063 Marchantia polymorpha HOM05D007523 ORTHO05D009520 1.7e-13 80.5 74 74.3
Psat4g110520 Pisum sativum HOM05D007523 ORTHO05D009520 2.2e-13 80.1 104 59.6
Medtr8g071180 Medicago truncatula HOM05D007523 ORTHO05D009520 4.9e-13 79.0 177 42.4
Peaxi162Scf00972g00043 Petunia axillaris HOM05D007523 ORTHO05D009520 3.2e-12 76.3 84 67.9
Mapoly0010s0014 Marchantia polymorpha HOM05D007523 ORTHO05D009520 7.0e-12 75.1 70 74.3
Pp3c19_7810 Physcomitrium patens HOM05D007523 ORTHO05D009520 1.2e-11 74.3 74 64.9
SMO353G0121 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.6e-11 72.4 71 70.4
SMO364G0280 Selaginella moellendorffii HOM05D007523 ORTHO05D009520 4.6e-11 72.4 71 70.4
Actinidia04633 Actinidia chinensis HOM05D007523 ORTHO05D009520 3.3e-09 66.2 91 56.0


User provided reference genes

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