Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 5.0e-134 481.1 241 100.0
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.2e-39 167.5 152 59.9
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 5.1e-38 162.2 169 57.4
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 1.5e-37 160.6 172 56.4
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 3.7e-36 156.0 165 58.2
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 3.7e-36 156.0 168 57.1
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.1e-35 154.5 168 56.5
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 6.9e-35 151.8 113 70.8
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.2e-34 151.0 166 55.4
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.3e-33 147.5 135 63.0
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.4e-32 144.1 87 83.9
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.9e-32 143.7 138 60.9
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 6.1e-31 138.7 179 46.9
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.4e-30 137.5 176 48.3
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 3.0e-30 136.3 175 48.0
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 8.8e-30 134.8 131 60.3
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 2.6e-29 133.3 170 47.6
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 3.3e-29 132.9 110 63.6
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.3e-29 132.9 148 52.0
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 1.3e-28 131.0 144 57.6
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 2.2e-28 130.2 125 57.6
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 6.3e-28 128.6 138 53.6
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 8.2e-28 128.3 161 48.4
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.4e-27 127.5 98 66.3
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 2.4e-27 126.7 114 58.8
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 3.1e-27 126.3 94 71.3
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 6.9e-27 125.2 104 64.4
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 9.1e-27 124.8 107 63.6
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 9.1e-27 124.8 97 68.0
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 1.2e-26 124.4 129 55.8
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 1.2e-26 124.4 129 55.8
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.5e-26 124.0 92 69.6
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 1.5e-26 124.0 92 69.6
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 1.5e-26 124.0 92 69.6
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 1.5e-26 124.0 124 54.8
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 2.6e-26 123.2 92 69.6
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 2.6e-26 123.2 92 69.6
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 3.4e-26 122.9 92 69.6
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 3.4e-26 122.9 108 63.0
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 3.4e-26 122.9 97 64.9
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 4.5e-26 122.5 92 69.6
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 7.7e-26 121.7 96 65.6
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 7.7e-26 121.7 96 65.6
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 1.0e-25 121.3 92 68.5
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 1.0e-25 121.3 92 68.5
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 1.3e-25 120.9 92 67.4
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.3e-25 120.9 108 60.2
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.7e-25 120.6 122 58.2
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 6.5e-25 118.6 92 68.5
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 8.5e-25 118.2 92 69.6
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 8.5e-25 118.2 110 59.1
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 8.5e-25 118.2 126 57.1
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.1e-24 117.9 172 41.9
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.4e-24 117.5 150 48.7
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.9e-24 117.1 143 48.3
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 4.2e-24 115.9 172 43.6
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 5.5e-24 115.5 108 57.4
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.2e-23 114.4 151 45.7
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 1.2e-23 114.4 91 63.7
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 2.1e-23 113.6 120 55.0
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 4.7e-23 112.5 72 77.8
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 4.7e-23 112.5 72 77.8
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 4.7e-23 112.5 96 58.3
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 8.8e-22 108.2 121 51.2
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 1.5e-21 107.5 119 52.1
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 2.6e-21 106.7 88 64.8
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 7.4e-21 105.1 126 50.0
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 9.7e-21 104.8 88 63.6
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 1.3e-20 104.4 155 47.1
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 2.8e-20 103.2 144 43.8
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 3.7e-20 102.8 92 62.0
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 6.3e-20 102.1 145 46.2
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 6.3e-20 102.1 86 64.0
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 4.1e-19 99.4 133 46.6
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 5.3e-19 99.0 66 72.7
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 9.1e-19 98.2 147 46.9
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 2.0e-18 97.1 172 38.4
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 2.0e-18 97.1 86 60.5
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 8.5e-17 91.7 91 53.8
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 8.5e-17 91.7 69 65.2
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 1.1e-16 91.3 66 66.7
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 4.2e-16 89.4 112 47.3
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 4.2e-16 89.4 149 40.3
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.2e-16 89.4 149 40.3
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 4.2e-16 89.4 88 53.4
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.5e-16 89.0 149 40.3
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 7.2e-16 88.6 129 41.9
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.2e-15 87.8 150 38.7
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.2e-15 87.8 108 47.2
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.2e-15 87.8 56 75.0
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 1.2e-15 87.8 166 38.0
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 2.1e-15 87.0 115 45.2
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.1e-15 87.0 96 50.0
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 2.7e-15 86.7 96 49.0
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 4.7e-15 85.9 149 38.9
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 4.7e-15 85.9 151 37.7
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.2e-13 81.3 105 44.8
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 2.6e-13 80.1 50 76.0
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 2.6e-13 80.1 113 44.2
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 3.3e-13 79.7 72 58.3
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 4.4e-13 79.3 69 58.0
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.7e-12 77.4 81 49.4
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 2.8e-12 76.6 150 38.7
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 3.7e-12 76.3 62 56.5
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 6.3e-12 75.5 62 54.8
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.4e-11 74.3 71 54.9
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 2.4e-11 73.6 120 40.8
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.6e-10 70.9 169 34.9
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 5.9e-10 68.9 62 58.1
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 5.9e-10 68.9 45 68.9
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 1.3e-09 67.8 116 38.8
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.1e-08 64.7 89 43.8
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 2.5e-08 63.5 70 48.6
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 3.2e-08 63.2 80 48.8
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 3.0e-06 56.6 123 34.1


User provided reference genes

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