Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2200 Utricularia gibba HOM05D005781 ORTHO05D006835 4.9e-51 204.1 100 100.0
Migut.H01206 Erythranthe guttata HOM05D005781 ORTHO05D006835 3.6e-30 134.8 94 71.3
Oeu052918.1 Olea europaea HOM05D005781 ORTHO05D006835 8.4e-27 123.6 92 67.4
Rhsim13G0061400 Rhododendron simsii HOM05D005781 ORTHO05D006835 8.4e-27 123.6 92 66.3
Dinv12261 Davidia involucrata HOM05D005781 ORTHO05D006835 3.2e-26 121.7 91 64.8
Cc05_g05310 Coffea canephora HOM05D005781 ORTHO05D006835 5.4e-26 120.9 91 61.5
Rhsim06G0009100 Rhododendron simsii HOM05D005781 ORTHO05D006835 5.4e-26 120.9 92 64.1
PGR031G1812 Punica granatum HOM05D005781 ORTHO05D006835 5.1e-24 114.4 91 62.6
Ciclev10023034m.g Citrus clementina HOM05D005781 ORTHO05D006835 6.6e-24 114.0 82 67.1
Dinv36923 Davidia involucrata HOM05D005781 ORTHO05D006835 1.1e-23 113.2 71 71.8
Manes.01G244300 Manihot esculenta HOM05D005781 ORTHO05D006835 1.9e-23 112.5 93 60.2
Cfa015971 Carpinus fangiana HOM05D005781 ORTHO05D006835 3.3e-23 111.7 100 56.0
Sc01g0002510 Simmondsia chinensis HOM05D005781 ORTHO05D006835 4.3e-23 111.3 96 59.4
THA.LOC104825391 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 4.3e-23 111.3 82 65.9
Lj3g0001466 Lotus japonicus HOM05D005781 ORTHO05D006835 5.6e-23 110.9 93 58.1
Ah.04g154640 Amaranthus hybridus HOM05D005781 ORTHO05D006835 7.3e-23 110.5 83 62.7
CANSAT54G0055 Cannabis sativa HOM05D005781 ORTHO05D006835 7.3e-23 110.5 93 57.0
Manes.02G161400 Manihot esculenta HOM05D005781 ORTHO05D006835 7.3e-23 110.5 82 62.2
Atru.chr1.3778 Acer truncatum HOM05D005781 ORTHO05D006835 9.6e-23 110.2 82 63.4
CiPaw.06G025900 Carya illinoinensis HOM05D005781 ORTHO05D006835 9.6e-23 110.2 91 58.2
Thecc.01G232600 Theobroma cacao HOM05D005781 ORTHO05D006835 9.6e-23 110.2 93 59.1
Hund27185 Selenicereus undatus HOM05D005781 ORTHO05D006835 1.6e-22 109.4 64 78.1
Aqoxy5G00270 Aquilegia oxysepala HOM05D005781 ORTHO05D006835 2.1e-22 109.0 92 58.7
COL.COLO4_20773 Corchorus olitorius HOM05D005781 ORTHO05D006835 2.8e-22 108.6 95 57.9
MD12G1213200 Malus domestica HOM05D005781 ORTHO05D006835 3.6e-22 108.2 95 55.8
Sopen07g026470 Solanum pennellii HOM05D005781 ORTHO05D006835 3.6e-22 108.2 90 58.9
DCAR_022248 Daucus carota HOM05D005781 ORTHO05D006835 4.8e-22 107.8 94 58.5
EL10Ac7g17336 Beta vulgaris HOM05D005781 ORTHO05D006835 6.2e-22 107.5 99 58.6
ClCG05G000700 Citrullus lanatus HOM05D005781 ORTHO05D006835 6.2e-22 107.5 91 57.1
MD04G1200700 Malus domestica HOM05D005781 ORTHO05D006835 6.2e-22 107.5 91 58.2
Sed0027756 Sechium edule HOM05D005781 ORTHO05D006835 6.2e-22 107.5 91 57.1
TWI63G1301 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 8.1e-22 107.1 93 54.8
COL.COLO4_33816 Corchorus olitorius HOM05D005781 ORTHO05D006835 1.1e-21 106.7 95 56.8
DCAR_003312 Daucus carota HOM05D005781 ORTHO05D006835 1.1e-21 106.7 83 66.3
Sed0023332 Sechium edule HOM05D005781 ORTHO05D006835 1.1e-21 106.7 91 57.1
vmacro02893 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 1.1e-21 106.7 89 62.9
Lj4g0019743 Lotus japonicus HOM05D005781 ORTHO05D006835 1.4e-21 106.3 93 57.0
Lj4g0026259 Lotus japonicus HOM05D005781 ORTHO05D006835 1.4e-21 106.3 93 57.0
Prupe.6G320800 Prunus persica HOM05D005781 ORTHO05D006835 1.4e-21 106.3 91 58.2
MBI09_g43998_MAGBIO Magnolia biondii HOM05D005781 ORTHO05D006835 2.4e-21 105.5 92 56.5
Gohir.D07G208300 Gossypium hirsutum HOM05D005781 ORTHO05D006835 3.1e-21 105.1 95 56.8
Gohir.A08G193000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.0e-21 104.8 82 61.0
Gohir.D08G211000 Gossypium hirsutum HOM05D005781 ORTHO05D006835 4.0e-21 104.8 82 61.0
Gorai.004G223700 Gossypium raimondii HOM05D005781 ORTHO05D006835 4.0e-21 104.8 82 61.0
Potri.001G082000 Populus trichocarpa HOM05D005781 ORTHO05D006835 4.0e-21 104.8 93 54.8
Eucgr.D02385 Eucalyptus grandis HOM05D005781 ORTHO05D006835 5.3e-21 104.4 92 56.5
Duzib138G0305 Durio zibethinus HOM05D005781 ORTHO05D006835 6.9e-21 104.0 82 58.5
Gohir.A07G202100 Gossypium hirsutum HOM05D005781 ORTHO05D006835 6.9e-21 104.0 95 54.7
Nn8g40131 Nelumbo nucifera HOM05D005781 ORTHO05D006835 6.9e-21 104.0 91 57.1
Oeu034339.1 Olea europaea HOM05D005781 ORTHO05D006835 9.0e-21 103.6 91 60.4
Gorai.001G235000 Gossypium raimondii HOM05D005781 ORTHO05D006835 2.0e-20 102.4 95 54.7
PGSC0003DMG400026192 Solanum tuberosum HOM05D005781 ORTHO05D006835 2.6e-20 102.1 91 54.9
CDE02G0151 Ceratophyllum demersum HOM05D005781 ORTHO05D006835 3.4e-20 101.7 92 55.4
CsaV3_3G007920 Cucumis sativus L. HOM05D005781 ORTHO05D006835 4.5e-20 101.3 71 62.0
Nn6g33491 Nelumbo nucifera HOM05D005781 ORTHO05D006835 5.8e-20 100.9 91 56.0
Ca_21653_v3 Cicer arietinum L. HOM05D005781 ORTHO05D006835 1.3e-19 99.8 93 53.8
SalBow1G0716 Salvia bowleyana HOM05D005781 ORTHO05D006835 3.8e-19 98.2 91 53.8
TWI38G0894 Tripterygium wilfordii HOM05D005781 ORTHO05D006835 3.8e-19 98.2 93 51.6
Zm00001eb109340 Zea mays HOM05D005781 ORTHO05D006835 6.4e-19 97.4 94 53.2
Glyma.05G129800 Glycine max HOM05D005781 ORTHO05D006835 8.4e-19 97.1 93 52.7
Glyma.08G084500 Glycine max HOM05D005781 ORTHO05D006835 8.4e-19 97.1 93 52.7
MELO3C006010.2 Cucumis melo HOM05D005781 ORTHO05D006835 1.4e-18 96.3 71 59.2
SGA_v2.0_scaffold57G20299 Striga asiatica HOM05D005781 ORTHO05D006835 1.4e-18 96.3 84 57.1
CSS0033648 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 1.9e-18 95.9 82 59.8
Lsat_1_v5_gn_9_14361 Lactuca sativa HOM05D005781 ORTHO05D006835 1.9e-18 95.9 88 58.0
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.2e-18 95.1 91 51.6
Hma1.2p1_0841F.1_g227020 Hydrangea macrophylla HOM05D005781 ORTHO05D006835 3.2e-18 95.1 81 56.8
RcHm_v2.0_Chr3g0455721 Rosa chinensis HOM05D005781 ORTHO05D006835 3.2e-18 95.1 93 50.5
Phvul.002G194100 Phaseolus vulgaris HOM05D005781 ORTHO05D006835 4.2e-18 94.7 93 50.5
Os01g0258600 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 5.4e-18 94.4 93 52.7
ECA247G2075 Erigeron canadensis HOM05D005781 ORTHO05D006835 7.1e-18 94.0 87 55.2
arahy.Tifrunner.gnm1.ann1.EVJW84 Arachis hypogaea HOM05D005781 ORTHO05D006835 9.3e-18 93.6 93 53.8
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 9.3e-18 93.6 91 50.5
FAN09G0731 Fragaria x ananassa HOM05D005781 ORTHO05D006835 9.3e-18 93.6 91 50.5
Medtr4g115740 Medicago truncatula HOM05D005781 ORTHO05D006835 1.2e-17 93.2 93 52.7
vmacro12515 Vaccinium macrocarpon HOM05D005781 ORTHO05D006835 1.2e-17 93.2 80 61.2
Nitab4.5_0001134g0180 Nicotiana tabacum HOM05D005781 ORTHO05D006835 1.6e-17 92.8 88 54.5
Nitab4.5_0003429g0070 Nicotiana tabacum HOM05D005781 ORTHO05D006835 2.1e-17 92.4 93 50.5
Atru.chr1.3777 Acer truncatum HOM05D005781 ORTHO05D006835 3.5e-17 91.7 108 50.9
Lalb_Chr13g0300501 Lupinus albus HOM05D005781 ORTHO05D006835 3.5e-17 91.7 93 51.6
Zm00001eb374690 Zea mays HOM05D005781 ORTHO05D006835 3.5e-17 91.7 64 62.5
Atru.chr5.698 Acer truncatum HOM05D005781 ORTHO05D006835 4.6e-17 91.3 80 56.2
Psat4g033600 Pisum sativum HOM05D005781 ORTHO05D006835 4.6e-17 91.3 93 48.4
QL04p074672 Quercus lobata HOM05D005781 ORTHO05D006835 4.6e-17 91.3 80 57.5
CSS0000543 Camellia sinensis var. sinensis HOM05D005781 ORTHO05D006835 6.0e-17 90.9 80 57.5
Peaxi162Scf00007g01414 Petunia axillaris HOM05D005781 ORTHO05D006835 1.0e-16 90.1 80 57.5
Haze_00504 Corylus avellana HOM05D005781 ORTHO05D006835 3.0e-16 88.6 80 55.0
Nitab4.5_0008807g0010 Nicotiana tabacum HOM05D005781 ORTHO05D006835 3.9e-16 88.2 80 55.0
RcHm_v2.0_Chr1g0322091 Rosa chinensis HOM05D005781 ORTHO05D006835 3.9e-16 88.2 70 57.1
Cfa011814 Carpinus fangiana HOM05D005781 ORTHO05D006835 1.1e-15 86.7 87 50.6
Thhalv10015111m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.1e-15 86.7 91 49.5
Thhalv10022933m.g Eutrema salsugineum HOM05D005781 ORTHO05D006835 1.5e-15 86.3 63 61.9
Rhsim06G0009300 Rhododendron simsii HOM05D005781 ORTHO05D006835 1.9e-15 85.9 71 60.6
THA.LOC104825885 Tarenaya hassleriana HOM05D005781 ORTHO05D006835 1.9e-15 85.9 71 59.2
Actinidia11611 Actinidia chinensis HOM05D005781 ORTHO05D006835 2.5e-15 85.5 58 67.2
BcaB01g04964 Brassica carinata HOM05D005781 ORTHO05D006835 2.5e-15 85.5 90 48.9
Cpa.g.c32851 Carica papaya HOM05D005781 ORTHO05D006835 2.5e-15 85.5 82 53.7
BcaB01g05237 Brassica carinata HOM05D005781 ORTHO05D006835 4.3e-15 84.7 63 60.3
C03p09360 Brassica napus HOM05D005781 ORTHO05D006835 4.3e-15 84.7 63 60.3
BolC3t13430H Brassica oleracea HOM05D005781 ORTHO05D006835 4.3e-15 84.7 63 60.3
Carub.0006s1516 Capsella rubella HOM05D005781 ORTHO05D006835 4.3e-15 84.7 63 60.3
AL6G27950 Arabidopsis lyrata HOM05D005781 ORTHO05D006835 7.4e-15 84.0 101 47.5
AT5G16950 Arabidopsis thaliana HOM05D005781 ORTHO05D006835 7.4e-15 84.0 63 60.3
A03p08090 Brassica napus HOM05D005781 ORTHO05D006835 7.4e-15 84.0 63 60.3
BraA03t10134Z Brassica rapa HOM05D005781 ORTHO05D006835 7.4e-15 84.0 63 60.3
HanXRQChr08g0228461 Helianthus annuus HOM05D005781 ORTHO05D006835 7.4e-15 84.0 57 66.7
Sp6g27160 Schrenkiella parvula HOM05D005781 ORTHO05D006835 9.6e-15 83.6 91 48.4
Solyc07g052913.1 Solanum lycopersicum HOM05D005781 ORTHO05D006835 1.3e-14 83.2 81 53.1
BcaB07g31735 Brassica carinata HOM05D005781 ORTHO05D006835 2.1e-14 82.4 96 49.0
CARHR196210 Cardamine hirsuta HOM05D005781 ORTHO05D006835 2.8e-14 82.0 63 58.7
Sabra01G0058900 Salix brachista HOM05D005781 ORTHO05D006835 4.8e-14 81.3 71 54.9
ATR0626G090 Amborella trichopoda HOM05D005781 ORTHO05D006835 8.1e-14 80.5 77 50.6
Aa31LG11G12650 Aethionema arabicum HOM05D005781 ORTHO05D006835 4.0e-13 78.2 49 69.4
Gohir.D05G278050 Gossypium hirsutum HOM05D005781 ORTHO05D006835 9.0e-13 77.0 84 46.4
Gorai.009G291400 Gossypium raimondii HOM05D005781 ORTHO05D006835 9.0e-13 77.0 84 46.4
Os06g0184100 Oryza sativa ssp. japonica HOM05D005781 ORTHO05D006835 9.0e-13 77.0 82 51.2
arahy.Tifrunner.gnm1.ann1.V38LZ0 Arachis hypogaea HOM05D005781 ORTHO05D006835 2.6e-12 75.5 129 38.8
SalBow1G0213 Salvia bowleyana HOM05D005781 ORTHO05D006835 5.8e-12 74.3 98 45.9
Gohir.A05G276166 Gossypium hirsutum HOM05D005781 ORTHO05D006835 8.4e-11 70.5 71 47.9
TPR.G40143 Trifolium pratense HOM05D005781 ORTHO05D006835 1.4e-10 69.7 77 48.1
Haze_11591 Corylus avellana HOM05D005781 ORTHO05D006835 2.5e-10 68.9 69 50.7
Medtr5g009535 Medicago truncatula HOM05D005781 ORTHO05D006835 7.1e-10 67.4 82 46.3
Pp3c9_710 Physcomitrium patens HOM05D005781 ORTHO05D006835 4.6e-09 64.7 55 49.1
Zm00001eb217150 Zea mays HOM05D000360 ORTHO05D006835 1.8e-08 62.8 53 58.5
Zm00001eb352440 Zea mays HOM05D000360 ORTHO05D006835 1.1e-07 60.1 53 56.6
Mapoly0010s0158 Marchantia polymorpha HOM05D005781 ORTHO05D006835 7.4e-07 57.4 52 50.0
VMungo0251G3003 Vigna mungo HOM05D005781 ORTHO05D006835 9.6e-07 57.0 69 44.9
A09p11320 Brassica napus HOM05D005781 ORTHO05D006835 1.3e-06 56.6 52 48.1
BraA09t36770Z Brassica rapa HOM05D005781 ORTHO05D006835 1.3e-06 56.6 52 48.1
BcaC04g22979 Brassica carinata HOM05D005781 ORTHO05D006835 4.8e-06 54.7 47 51.1


User provided reference genes

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