Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 9.3e-124 446.8 214 100.0
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 3.0e-90 335.5 216 74.1
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 6.9e-87 324.3 220 71.4
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 5.9e-86 321.2 210 71.4
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 1.3e-85 320.1 224 70.1
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.3e-85 320.1 208 74.0
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.7e-85 319.7 172 83.7
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.7e-85 319.7 213 70.4
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 3.8e-85 318.5 171 83.6
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 8.5e-85 317.4 208 74.0
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.4e-84 316.6 165 86.1
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 1.4e-84 316.6 213 70.9
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.9e-84 316.2 218 69.3
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 1.9e-84 316.2 211 73.0
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 7.2e-84 314.3 208 74.0
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 7.2e-84 314.3 222 67.6
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 9.4e-84 313.9 167 86.2
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 1.2e-83 313.5 222 68.0
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 1.6e-83 313.2 213 71.8
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 2.1e-83 312.8 222 67.1
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.1e-83 312.8 222 67.1
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.1e-83 312.8 222 67.1
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 2.1e-83 312.8 228 66.2
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 3.6e-83 312.0 202 73.8
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 3.6e-83 312.0 212 69.3
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 4.6e-83 311.6 228 66.2
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 7.9e-83 310.8 180 80.0
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 1.4e-82 310.1 166 85.5
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.8e-82 309.7 227 65.2
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 3.0e-82 308.9 181 79.0
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 3.9e-82 308.5 193 74.1
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 3.9e-82 308.5 166 83.1
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 5.1e-82 308.1 175 79.4
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 5.1e-82 308.1 170 82.9
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 6.7e-82 307.8 213 68.5
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 8.8e-82 307.4 173 79.8
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 1.1e-81 307.0 229 66.4
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 1.5e-81 306.6 220 68.2
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 2.0e-81 306.2 202 73.8
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 2.5e-81 305.8 179 78.8
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 2.5e-81 305.8 199 72.9
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 2.5e-81 305.8 202 72.8
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 3.3e-81 305.4 179 78.2
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 3.3e-81 305.4 175 78.9
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 4.3e-81 305.1 187 77.0
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 5.7e-81 304.7 189 72.5
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 7.4e-81 304.3 192 74.5
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 7.4e-81 304.3 164 82.9
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 9.7e-81 303.9 210 70.0
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 1.3e-80 303.5 211 70.1
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 1.3e-80 303.5 156 87.2
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.3e-80 303.5 156 87.2
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.7e-80 303.1 217 68.7
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 2.2e-80 302.8 165 83.0
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 3.7e-80 302.0 161 83.2
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 4.8e-80 301.6 182 76.4
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 6.3e-80 301.2 158 83.5
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 8.2e-80 300.8 180 76.7
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 8.2e-80 300.8 177 76.3
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.1e-79 300.4 185 74.6
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 2.4e-79 299.3 160 81.9
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.1e-79 298.9 172 76.7
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 3.1e-79 298.9 220 66.4
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 5.3e-79 298.1 172 80.2
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 6.9e-79 297.7 192 74.0
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 2.6e-78 295.8 188 72.3
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 3.4e-78 295.4 176 75.0
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 3.4e-78 295.4 161 81.4
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 4.5e-78 295.0 219 65.8
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 7.7e-78 294.3 190 72.1
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 7.7e-78 294.3 179 76.5
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 1.0e-77 293.9 194 72.7
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 1.0e-77 293.9 194 72.7
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 1.0e-77 293.9 194 72.7
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 1.3e-77 293.5 194 72.2
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.3e-77 293.5 162 81.5
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 1.7e-77 293.1 172 78.5
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 5.0e-77 291.6 176 76.7
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 5.0e-77 291.6 176 76.7
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 6.5e-77 291.2 175 76.0
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 6.5e-77 291.2 191 71.2
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 8.5e-77 290.8 191 73.3
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 3.2e-76 288.9 166 77.7
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 4.2e-76 288.5 191 69.6
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 6.1e-75 284.6 197 69.0
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 3.9e-74 282.0 172 77.3
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 7.4e-73 277.7 201 67.7
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 2.8e-72 275.8 143 86.0
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 8.2e-72 274.2 151 82.1
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 8.2e-72 274.2 203 65.0
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 2.6e-70 269.2 142 85.2
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 1.3e-69 266.9 143 81.1
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 8.0e-67 257.7 161 73.3
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 1.0e-66 257.3 169 71.0
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.4e-66 256.9 179 65.4
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 2.9e-61 239.2 172 65.7
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 3.8e-61 238.8 164 68.3
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 1.2e-57 227.3 155 64.5
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 3.7e-56 222.2 222 52.3
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.4e-55 220.3 131 77.9
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 3.8e-53 212.2 173 61.8
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 8.5e-53 211.1 110 87.3
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 5.0e-45 185.3 122 68.0
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 5.6e-44 181.8 130 64.6
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 7.5e-41 171.4 172 53.5
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 5.2e-34 148.7 160 45.6
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 6.0e-30 135.2 90 67.8
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 2.2e-24 116.7 230 36.1
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 4.6e-14 82.4 41 90.2
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 7.8e-14 81.6 48 70.8
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 3.8e-08 62.8 61 49.2


User provided reference genes

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