Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2136 Utricularia gibba HOM05D001952 ORTHO05D005047 5.0e-168 594.3 301 100.0
SGA_v2.0_scaffold341G49359 Striga asiatica HOM05D001952 ORTHO05D005047 1.6e-121 439.9 301 72.4
MSTRG.27460 Avicennia marina HOM05D001952 ORTHO05D005047 3.1e-117 425.6 300 71.3
SalBow3G3659 Salvia bowleyana HOM05D001952 ORTHO05D005047 1.5e-116 423.3 301 70.8
CiPaw.01G274000 Carya illinoinensis HOM05D001952 ORTHO05D005047 1.3e-115 420.2 300 70.7
MSTRG.8150 Avicennia marina HOM05D001952 ORTHO05D005047 1.9e-114 416.4 301 69.4
Sopen04g018690 Solanum pennellii HOM05D001952 ORTHO05D005047 5.5e-114 414.8 301 68.4
QL08p056315 Quercus lobata HOM05D001952 ORTHO05D005047 7.2e-114 414.5 299 68.9
Solyc04g049180.3 Solanum lycopersicum HOM05D001952 ORTHO05D005047 7.9e-113 411.0 301 67.8
CAN.G4.5 Capsicum annuum HOM05D001952 ORTHO05D005047 1.8e-112 409.8 301 66.4
Peaxi162Scf00272g00023 Petunia axillaris HOM05D001952 ORTHO05D005047 3.9e-112 408.7 297 67.3
Haze_16907 Corylus avellana HOM05D001952 ORTHO05D004913 6.7e-112 407.9 298 68.1
RcHm_v2.0_Chr1g0363681 Rosa chinensis HOM05D001952 ORTHO05D005047 6.7e-112 407.9 301 67.4
Actinidia38268 Actinidia chinensis HOM05D001952 ORTHO05D005047 8.8e-112 407.5 300 68.3
MELO3C002900.2 Cucumis melo HOM05D001952 ORTHO05D005047 2.5e-111 406.0 298 66.4
CSS0043642 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 3.3e-111 405.6 300 68.0
CsaV3_5G025750 Cucumis sativus L. HOM05D001952 ORTHO05D005047 7.4e-111 404.4 298 66.1
Prupe.8G142500 Prunus persica HOM05D001952 ORTHO05D005047 7.4e-111 404.4 298 69.1
MD07G1176100 Malus domestica HOM05D001952 ORTHO05D005047 1.3e-110 403.7 298 68.1
Ciclev10032201m.g Citrus clementina HOM05D001952 ORTHO05D005047 3.7e-110 402.1 298 64.8
FAN10G0547 Fragaria x ananassa HOM05D001952 ORTHO05D005047 3.7e-110 402.1 301 66.8
FvH4_7g19770 Fragaria vesca HOM05D001952 ORTHO05D005047 4.8e-110 401.7 301 66.8
FAN03G1754 Fragaria x ananassa HOM05D001952 ORTHO05D005047 6.3e-110 401.4 301 66.4
FAN01G0922 Fragaria x ananassa HOM05D001952 ORTHO05D005047 8.2e-110 401.0 301 66.4
Migut.F02000 Erythranthe guttata HOM05D001952 ORTHO05D005047 3.1e-109 399.1 301 67.8
Rhsim03G0124200 Rhododendron simsii HOM05D001952 ORTHO05D005047 3.1e-109 399.1 300 66.0
CANSAT56G1702 Cannabis sativa HOM05D001952 ORTHO05D005047 5.3e-109 398.3 301 65.8
Sed0013357 Sechium edule HOM05D001952 ORTHO05D005047 5.3e-109 398.3 298 65.8
Rhsim09G0040900 Rhododendron simsii HOM05D001952 ORTHO05D005047 6.9e-109 397.9 300 65.7
Lj1C916T4 Lonicera japonica HOM05D001952 ORTHO05D005047 1.5e-108 396.7 301 66.4
Thecc.10G071300 Theobroma cacao HOM05D001952 ORTHO05D005047 2.0e-108 396.4 298 66.1
TWI38G1551 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 4.5e-108 395.2 300 65.3
Actinidia03051 Actinidia chinensis HOM05D001952 ORTHO05D005047 7.7e-108 394.4 300 68.0
Lalb_Chr01g0010101 Lupinus albus HOM05D001952 ORTHO05D005047 1.7e-107 393.3 298 65.8
Potri.010G220900 Populus trichocarpa HOM05D001952 ORTHO05D005047 1.7e-107 393.3 300 66.3
Nitab4.5_0001352g0010 Nicotiana tabacum HOM05D001952 ORTHO05D005047 2.2e-107 392.9 300 66.3
CSS0010121 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 6.5e-107 391.3 303 67.7
Phvul.004G071600 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 8.5e-107 391.0 298 66.1
Dinv11786 Davidia involucrata HOM05D001952 ORTHO05D007415 1.1e-106 390.6 298 65.8
TAR633G1943 Trochodendron aralioides HOM05D001952 ORTHO05D005047 1.1e-106 390.6 305 66.2
TAR623G1191 Trochodendron aralioides HOM05D001952 ORTHO05D005047 2.5e-106 389.4 304 65.5
VMungo0464G0347 Vigna mungo HOM05D001952 ORTHO05D005047 4.2e-106 388.7 299 64.5
Hma1.2p1_0063F.1_g034440 Hydrangea macrophylla HOM05D001952 ORTHO05D005047 7.2e-106 387.9 300 67.3
Duzib106G0378 Durio zibethinus HOM05D001952 ORTHO05D005047 9.4e-106 387.5 298 64.1
Nitab4.5_0000233g0070 Nicotiana tabacum HOM05D001952 ORTHO05D005047 9.4e-106 387.5 295 65.8
TWI15G0762 Tripterygium wilfordii HOM05D001952 ORTHO05D005047 9.4e-106 387.5 300 63.7
GSVIVG01016297001 Vitis vinifera HOM05D001952 ORTHO05D005047 9.4e-106 387.5 301 65.1
Oeu043934.2 Olea europaea HOM05D001952 ORTHO05D005047 1.2e-105 387.1 267 68.5
Manes.07G104300 Manihot esculenta HOM05D001952 ORTHO05D005047 1.6e-105 386.7 300 66.7
Lj2g0017031 Lotus japonicus HOM05D001952 ORTHO05D005047 4.7e-105 385.2 298 64.1
TPR.G36683 Trifolium pratense HOM05D001952 ORTHO05D005047 4.7e-105 385.2 291 65.3
arahy.Tifrunner.gnm1.ann1.I356LV Arachis hypogaea HOM05D001952 ORTHO05D005047 6.1e-105 384.8 296 63.9
Glyma.16G145700 Glycine max HOM05D001952 ORTHO05D005047 6.1e-105 384.8 298 65.4
Psat6g185440 Pisum sativum HOM05D001952 ORTHO05D005047 1.4e-104 383.6 297 62.6
Gohir.D04G003200 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.8e-104 383.3 298 64.1
Gorai.012G004300 Gossypium raimondii HOM05D001952 ORTHO05D005047 1.8e-104 383.3 298 64.1
arahy.Tifrunner.gnm1.ann1.BF0W30 Arachis hypogaea HOM05D001952 ORTHO05D005047 3.9e-104 382.1 297 64.6
arahy.Tifrunner.gnm1.ann1.GFW5PY Arachis hypogaea HOM05D001952 ORTHO05D005047 6.7e-104 381.3 297 64.6
Glyma.02G064500 Glycine max HOM05D001952 ORTHO05D005047 6.7e-104 381.3 298 64.4
Gohir.D10G215100 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.5e-103 380.2 297 64.0
Phvul.007G093800 Phaseolus vulgaris HOM05D001952 ORTHO05D005047 1.5e-103 380.2 297 62.6
Gohir.A05G412900 Gossypium hirsutum HOM05D001952 ORTHO05D005047 2.0e-103 379.8 298 63.4
Gohir.A10G207000 Gossypium hirsutum HOM05D001952 ORTHO05D005047 2.0e-103 379.8 298 63.4
Atru.chr12.731 Acer truncatum HOM05D001952 ORTHO05D005047 2.6e-103 379.4 301 63.8
Gorai.011G240600 Gossypium raimondii HOM05D001952 ORTHO05D005047 2.6e-103 379.4 286 65.4
Nn2g13073 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.6e-103 379.4 303 63.0
Glyma.10G212100 Glycine max HOM05D001952 ORTHO05D005047 4.4e-103 378.6 289 63.7
Nn2g10756 Nelumbo nucifera HOM05D001952 ORTHO05D005047 5.7e-103 378.3 303 63.0
Hund12040 Selenicereus undatus HOM05D001952 ORTHO05D005047 9.7e-103 377.5 301 64.5
DCAR_006448 Daucus carota HOM05D001952 ORTHO05D005047 1.3e-102 377.1 335 60.0
PGR044G1956 Punica granatum HOM05D001952 ORTHO05D005047 1.3e-102 377.1 298 62.1
Medtr1g095490 Medicago truncatula HOM05D001952 ORTHO05D005047 1.7e-102 376.7 297 61.6
Lsat_1_v5_gn_9_68641 Lactuca sativa HOM05D001952 ORTHO05D005047 2.8e-102 375.9 305 61.3
ClCG09G020640 Citrullus lanatus HOM05D001952 ORTHO05D005047 3.7e-102 375.6 347 56.8
THA.LOC104809877 Tarenaya hassleriana HOM05D001952 ORTHO05D005047 3.7e-102 375.6 300 61.7
TPR.G1807 Trifolium pratense HOM05D001952 ORTHO05D005047 3.7e-102 375.6 277 64.6
vmacro07078 Vaccinium macrocarpon HOM05D001952 ORTHO05D005047 3.7e-102 375.6 300 63.7
Sc20g0001940 Simmondsia chinensis HOM05D001952 ORTHO05D005047 6.3e-102 374.8 301 64.1
Lj5g0021726 Lotus japonicus HOM05D001952 ORTHO05D005047 8.2e-102 374.4 299 61.9
HanXRQChr09g0246441 Helianthus annuus HOM05D001952 ORTHO05D005047 1.1e-101 374.0 303 63.4
ECA232G3999 Erigeron canadensis HOM05D001952 ORTHO05D005047 5.3e-101 371.7 300 63.0
Potri.008G041100 Populus trichocarpa HOM05D001952 ORTHO05D005047 6.9e-101 371.3 300 63.7
Eucgr.J01098 Eucalyptus grandis HOM05D001952 ORTHO05D005047 2.6e-100 369.4 297 60.9
Lsat_1_v5_gn_8_19940 Lactuca sativa HOM05D001952 ORTHO05D005047 3.8e-99 365.5 299 61.5
Aqoxy7G02906 Aquilegia oxysepala HOM05D001952 ORTHO05D005047 5.0e-99 365.2 302 61.6
MBI07_g41454_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 6.5e-99 364.8 289 63.7
Sabra10G0170600 Salix brachista HOM05D001952 ORTHO05D005047 8.5e-99 364.4 335 58.5
HPP92_014675 Vanilla planifolia HOM05D001952 ORTHO05D005047 8.5e-99 364.4 304 59.9
AUR62036746 Chenopodium quinoa HOM05D001952 ORTHO05D005047 1.4e-98 363.6 298 59.7
PSO384G3798 Papaver somniferum HOM05D001952 ORTHO05D005047 3.2e-98 362.5 302 62.6
AT3G07950 Arabidopsis thaliana HOM05D001952 ORTHO05D005047 4.2e-98 362.1 300 60.3
Carub.0003s0752 Capsella rubella HOM05D001952 ORTHO05D005047 9.4e-98 360.9 302 60.3
Gorai.013G026100 Gossypium raimondii HOM05D001952 ORTHO05D005047 1.6e-97 360.1 299 60.5
Aa31LG5G18490 Aethionema arabicum HOM05D001952 ORTHO05D005047 6.1e-97 358.2 296 60.1
AL3G19330 Arabidopsis lyrata HOM05D001952 ORTHO05D005047 8.0e-97 357.8 300 59.7
PSO339G4598 Papaver somniferum HOM05D001952 ORTHO05D005047 8.0e-97 357.8 302 61.9
Cpa.g.sc53.62 Carica papaya HOM05D001952 ORTHO05D005047 1.4e-96 357.1 298 60.1
PSO339G2303 Papaver somniferum HOM05D001952 ORTHO05D005047 1.4e-96 357.1 301 60.5
CARHR082690 Cardamine hirsuta HOM05D001952 ORTHO05D005047 2.3e-96 356.3 300 59.7
Ah.11g040520 Amaranthus hybridus HOM05D001952 ORTHO05D005047 3.0e-96 355.9 293 59.4
BcaC09g47964 Brassica carinata HOM05D001952 ORTHO05D005047 3.9e-96 355.5 300 59.3
Duzib114G0604 Durio zibethinus HOM05D001952 ORTHO05D005047 3.9e-96 355.5 264 64.8
BcaC05g29583 Brassica carinata HOM05D001952 ORTHO05D005047 5.2e-96 355.1 300 58.7
COL.COLO4_23705 Corchorus olitorius HOM05D001952 ORTHO05D005047 5.2e-96 355.1 379 50.7
Sp3g06860 Schrenkiella parvula HOM05D001952 ORTHO05D005047 5.2e-96 355.1 300 59.3
Thhalv10021192m.g Eutrema salsugineum HOM05D001952 ORTHO05D005047 6.7e-96 354.8 304 58.6
PSO063G6730 Papaver somniferum HOM05D001952 ORTHO05D005047 8.8e-96 354.4 299 60.5
ATR0115G026 Amborella trichopoda HOM05D001952 ORTHO05D005047 1.1e-95 354.0 286 62.6
BolC1t05516H Brassica oleracea HOM05D001952 ORTHO05D005047 1.1e-95 354.0 298 59.4
Gohir.D13G023300 Gossypium hirsutum HOM05D001952 ORTHO05D005047 2.6e-95 352.8 299 60.2
BcaB04g21262 Brassica carinata HOM05D001952 ORTHO05D005047 7.4e-95 351.3 300 58.3
C05p59390 Brassica napus HOM05D001952 ORTHO05D005047 7.4e-95 351.3 300 58.7
Sabra08G0027900 Salix brachista HOM05D001952 ORTHO05D005047 1.3e-94 350.5 331 58.0
BolC5t34594H Brassica oleracea HOM05D001952 ORTHO05D005047 3.7e-94 349.0 298 59.1
A05p40310 Brassica napus HOM05D001952 ORTHO05D005047 4.8e-94 348.6 300 58.0
BcaB03g11556 Brassica carinata HOM05D000484 ORTHO05D005047 8.2e-94 347.8 292 58.9
CiPaw.02G174800 Carya illinoinensis HOM05D001952 ORTHO05D005047 9.1e-93 344.4 274 63.1
Cc09_g01990 Coffea canephora HOM05D001952 ORTHO05D005047 3.5e-92 342.4 234 71.4
CDE10G0691 Ceratophyllum demersum HOM05D001952 ORTHO05D005047 4.5e-92 342.0 304 56.9
Os03g0358200 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 7.7e-92 341.3 290 59.0
SEGI_02403 Sequoiadendron giganteum HOM05D001952 ORTHO05D005047 1.0e-91 340.9 305 56.7
Zm00001eb110580 Zea mays HOM05D001952 ORTHO05D005047 2.9e-91 339.3 301 56.1
CSS0012304 Camellia sinensis var. sinensis HOM05D001952 ORTHO05D005047 5.0e-91 338.6 260 65.4
EL10Ac1g02054 Beta vulgaris HOM05D001952 ORTHO05D005047 1.5e-90 337.0 336 52.7
FAN06G0112 Fragaria x ananassa HOM05D001952 ORTHO05D005047 1.5e-90 337.0 258 64.3
Os07g0655400 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 2.5e-90 336.3 301 55.8
AUR62013854 Chenopodium quinoa HOM05D001952 ORTHO05D005047 2.1e-89 333.2 264 59.8
Zm00001eb394380 Zea mays HOM05D001952 ORTHO05D005047 1.6e-84 317.0 269 57.6
Dinv31333 Davidia involucrata HOM05D001952 ORTHO05D005047 5.5e-82 308.5 296 56.1
ATR0559G188 Amborella trichopoda HOM05D001952 ORTHO05D005047 1.3e-78 297.4 299 51.5
Mapoly0066s0031 Marchantia polymorpha HOM05D001952 ORTHO05D005047 2.8e-78 296.2 279 53.8
AagrBONN_evm.TU.Sc2ySwM_344.4977 Anthoceros agrestis HOM05D001952 ORTHO05D005047 4.8e-78 295.4 289 52.9
unitig_747.g21458 Utricularia gibba HOM05D001952 ORTHO05D005047 6.3e-78 295.0 182 79.1
SalBow4G0807 Salvia bowleyana HOM05D001952 ORTHO05D005047 1.1e-74 284.3 305 52.8
unitig_736.g22520 Utricularia gibba HOM05D001952 ORTHO05D005047 3.3e-74 282.7 279 51.6
SMO140G0041 Selaginella moellendorffii HOM05D001952 ORTHO05D005047 2.3e-72 276.6 273 52.4
Os04g0103300 Oryza sativa ssp. japonica HOM05D001952 ORTHO05D005047 2.0e-71 273.5 296 48.6
Pp3c16_4780 Physcomitrium patens HOM05D001952 ORTHO05D005047 2.6e-71 273.1 279 50.5
Zm00001eb089590 Zea mays HOM05D001952 ORTHO05D005047 5.4e-69 265.4 281 48.4
Pp3c27_5280 Physcomitrium patens HOM05D001952 ORTHO05D005047 7.0e-69 265.0 287 50.2
Zm00001eb418910 Zea mays HOM05D001952 ORTHO05D005047 2.7e-68 263.1 296 47.0
Gohir.A13G024400 Gossypium hirsutum HOM05D001952 ORTHO05D005047 1.7e-67 260.4 231 58.0
Zm00001eb017450 Zea mays HOM05D001952 ORTHO05D005047 1.9e-66 256.9 239 54.8
SHI07338 Sapria himalayana HOM05D001952 ORTHO05D005047 1.2e-63 247.7 272 48.5
Nn2g10413 Nelumbo nucifera HOM05D001952 ORTHO05D005047 4.9e-62 242.3 234 52.6
arahy.Tifrunner.gnm1.ann1.1JAQ89 Arachis hypogaea HOM05D001952 ORTHO05D005047 3.2e-61 239.6 204 58.8
MBI17_g17186_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 9.8e-55 218.0 326 43.6
ECA233G5952 Erigeron canadensis HOM05D001952 ORTHO05D005047 3.3e-50 203.0 189 56.6
TAR633G1124 Trochodendron aralioides HOM05D002354 ORTHO05D002469 9.5e-50 201.4 220 48.6
Oeu052143.1 Olea europaea HOM05D001952 ORTHO05D005047 3.1e-48 196.4 147 61.9
arahy.Tifrunner.gnm1.ann1.RZKK0D Arachis hypogaea HOM05D001952 ORTHO05D005047 1.5e-47 194.1 215 50.2
Lalb_Chr19g0129631 Lupinus albus HOM05D001952 ORTHO05D005047 1.5e-47 194.1 196 53.6
CBR_g52157 Chara braunii HOM05D001952 ORTHO05D005047 2.9e-46 189.9 221 44.3
Migut.F01769 Erythranthe guttata HOM05D001952 ORTHO05D005047 2.5e-42 176.8 156 58.3
Cre17.g706850 Chlamydomonas reinhardtii HOM05D001952 ORTHO05D005047 3.3e-42 176.4 281 37.7
MD01G1110300 Malus domestica HOM05D001952 ORTHO05D005047 4.4e-39 166.0 151 57.0
arahy.Tifrunner.gnm1.ann1.1BY4XL Arachis hypogaea HOM05D001952 ORTHO05D005047 4.2e-29 132.9 105 63.8
MCO07G038 Micromonas commoda HOM05D001952 ORTHO05D005047 4.2e-29 132.9 254 29.5
MCO03G295 Micromonas commoda HOM05D001952 ORTHO05D005047 1.6e-28 131.0 273 29.7
Ca_12760_v3 Cicer arietinum L. HOM05D001952 ORTHO05D005047 2.6e-23 113.6 114 50.9
PRCOL_00004972 Prasinoderma coloniale HOM05D001952 ORTHO05D005047 9.9e-23 111.7 285 29.8
arahy.Tifrunner.gnm1.ann1.PMPU7Y Arachis hypogaea HOM05D001952 ORTHO05D005047 1.3e-22 111.3 124 51.6
Nn1g06899 Nelumbo nucifera HOM05D001952 ORTHO05D005047 2.9e-22 110.2 76 71.1
Cfa025342 Carpinus fangiana HOM05D001952 ORTHO05D005047 2.7e-20 103.6 214 27.1
PRCOL_00006255 Prasinoderma coloniale HOM05D000177 ORTHO05D002683 3.0e-19 100.1 272 30.5
unitig_747.g21459 Utricularia gibba HOM05D001952 ORTHO05D005047 5.6e-10 69.3 45 73.3
CBR_g52155 Chara braunii HOM05D001952 ORTHO05D134355 1.6e-09 67.8 55 52.7
MBI19_g20119_MAGBIO Magnolia biondii HOM05D001952 ORTHO05D005047 3.8e-06 56.6 35 74.3


User provided reference genes

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