Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2130 Utricularia gibba HOM05D004752 ORTHO05D005523 5.9e-46 187.2 95 100.0
unitig_747.g21474 Utricularia gibba HOM05D004752 ORTHO05D005523 7.0e-31 137.1 80 86.2
Glyma.10G117300 Glycine max HOM05D004752 ORTHO05D005523 1.6e-27 125.9 97 66.0
PGR042G3757 Punica granatum HOM05D004752 ORTHO05D005523 2.7e-27 125.2 100 70.0
Glyma.20G068500 Glycine max HOM05D004752 ORTHO05D005523 3.6e-27 124.8 97 66.0
Lj6g0009552 Lotus japonicus HOM05D004752 ORTHO05D005523 1.8e-26 122.5 97 63.9
Lalb_Chr19g0129031 Lupinus albus HOM05D004752 ORTHO05D005523 1.8e-26 122.5 87 69.0
Atru.chr13.2410 Acer truncatum HOM05D004752 ORTHO05D005523 2.3e-26 122.1 97 68.0
CSS0011118 Camellia sinensis var. sinensis HOM05D004752 ORTHO05D005523 3.0e-26 121.7 94 67.0
CSS0018537 Camellia sinensis var. sinensis HOM05D004752 ORTHO05D005523 3.0e-26 121.7 94 67.0
Carub.0002s1880 Capsella rubella HOM05D004752 ORTHO05D005523 4.0e-26 121.3 87 67.8
CARHR064830 Cardamine hirsuta HOM05D004752 ORTHO05D005523 4.0e-26 121.3 87 66.7
Sp5g27090 Schrenkiella parvula HOM05D004752 ORTHO05D005523 4.0e-26 121.3 87 67.8
BcaB03g14924 Brassica carinata HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 66.7
BcaC08g45743 Brassica carinata HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 67.8
BcaC08g46647 Brassica carinata HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 66.7
BcaC08g46649 Brassica carinata HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 66.7
BcaC08g46651 Brassica carinata HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 66.7
BcaC08g46652 Brassica carinata HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 66.7
A07p38200 Brassica napus HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 67.8
BolC6t38628H Brassica oleracea HOM05D004752 ORTHO05D005523 5.2e-26 120.9 87 67.8
COL.COLO4_34528 Corchorus olitorius HOM05D004752 ORTHO05D005523 5.2e-26 120.9 90 70.0
THA.LOC104809736 Tarenaya hassleriana HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 64.9
C06p46120 Brassica napus HOM05D004752 ORTHO05D005523 6.7e-26 120.6 87 66.7
BolC6t39665H Brassica oleracea HOM05D004752 ORTHO05D005523 6.7e-26 120.6 87 66.7
Lj5g0024701 Lotus japonicus HOM05D004752 ORTHO05D005523 6.7e-26 120.6 99 64.6
Nn5g27610 Nelumbo nucifera HOM05D004752 ORTHO05D005523 6.7e-26 120.6 98 65.3
TPR.G20783 Trifolium pratense HOM05D004752 ORTHO05D005523 6.7e-26 120.6 97 62.9
TAR381G0821 Trochodendron aralioides HOM05D004752 ORTHO05D005523 6.7e-26 120.6 85 72.9
C06p35220 Brassica napus HOM05D004752 ORTHO05D005523 8.8e-26 120.2 87 67.8
BraA07t31385Z Brassica rapa HOM05D004752 ORTHO05D005523 8.8e-26 120.2 87 66.7
SalBow6G0286 Salvia bowleyana HOM05D004752 ORTHO05D005523 8.8e-26 120.2 83 71.1
Lalb_Chr01g0010501 Lupinus albus HOM05D004752 ORTHO05D005523 1.2e-25 119.8 97 64.9
Potri.019G081700 Populus trichocarpa HOM05D004752 ORTHO05D005523 1.5e-25 119.4 97 62.9
Thecc.08G186100 Theobroma cacao HOM05D004752 ORTHO05D005523 1.5e-25 119.4 90 68.9
Aa31LG4G8590 Aethionema arabicum HOM05D004752 ORTHO05D005523 2.6e-25 118.6 97 63.9
A07p30460 Brassica napus HOM05D004752 ORTHO05D005523 2.6e-25 118.6 88 68.2
Cc00_g06570 Coffea canephora HOM05D004752 ORTHO05D005523 2.6e-25 118.6 94 63.8
BcaB03g15640 Brassica carinata HOM05D004752 ORTHO05D005523 3.3e-25 118.2 88 68.2
Medtr1g048960 Medicago truncatula HOM05D004752 ORTHO05D005523 3.3e-25 118.2 97 61.9
Dinv41721 Davidia involucrata HOM05D004752 ORTHO05D005523 4.4e-25 117.9 94 62.8
Peaxi162Scf00268g00615 Petunia axillaris HOM05D004752 ORTHO05D005523 4.4e-25 117.9 98 64.3
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 5.7e-25 117.5 87 64.4
ECA247G0381 Erigeron canadensis HOM05D004752 ORTHO05D005523 5.7e-25 117.5 82 72.0
Lalb_Chr03g0036521 Lupinus albus HOM05D004752 ORTHO05D005523 5.7e-25 117.5 97 63.9
QL12p035384 Quercus lobata HOM05D004752 ORTHO05D005523 5.7e-25 117.5 95 62.1
RcHm_v2.0_Chr7g0240801 Rosa chinensis HOM05D004752 ORTHO05D005523 7.5e-25 117.1 87 65.5
BcaB05g24700 Brassica carinata HOM05D004752 ORTHO05D005523 9.7e-25 116.7 87 65.5
BcaC03g15326 Brassica carinata HOM05D004752 ORTHO05D005523 9.7e-25 116.7 87 65.5
A02p17630 Brassica napus HOM05D004752 ORTHO05D005523 9.7e-25 116.7 87 65.5
C02p29310 Brassica napus HOM05D004752 ORTHO05D005523 9.7e-25 116.7 87 65.5
BolC2t08982H Brassica oleracea HOM05D004752 ORTHO05D005523 9.7e-25 116.7 87 65.5
BraA02t06809Z Brassica rapa HOM05D004752 ORTHO05D005523 9.7e-25 116.7 87 65.5
Duzib211G0386 Durio zibethinus HOM05D004752 ORTHO05D005523 9.7e-25 116.7 100 62.0
Gohir.D05G253600 Gossypium hirsutum HOM05D004752 ORTHO05D005523 9.7e-25 116.7 88 67.0
Gorai.009G263400 Gossypium raimondii HOM05D004752 ORTHO05D005523 9.7e-25 116.7 88 67.0
Prupe.1G506700 Prunus persica HOM05D004752 ORTHO05D005523 9.7e-25 116.7 87 67.8
SalBow6G5891 Salvia bowleyana HOM05D004752 ORTHO05D005523 9.7e-25 116.7 95 64.2
VMungo0720G2181 Vigna mungo HOM05D004752 ORTHO05D005523 9.7e-25 116.7 74 73.0
BraA07t30682Z Brassica rapa HOM05D004752 ORTHO05D005523 1.3e-24 116.3 88 67.0
Thhalv10019369m.g Eutrema salsugineum HOM05D004752 ORTHO05D005523 1.3e-24 116.3 87 65.5
Nitab4.5_0000303g0280 Nicotiana tabacum HOM05D004752 ORTHO05D005523 1.3e-24 116.3 98 63.3
Nitab4.5_0001082g0040 Nicotiana tabacum HOM05D004752 ORTHO05D005523 1.3e-24 116.3 98 63.3
THA.LOC104816385 Tarenaya hassleriana HOM05D004752 ORTHO05D005523 1.3e-24 116.3 98 65.3
MSTRG.1541 Avicennia marina HOM05D004752 ORTHO05D005523 1.7e-24 115.9 94 63.8
FAN08G2110 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.7e-24 115.9 97 60.8
FAN13G0652 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.7e-24 115.9 97 60.8
Gohir.A05G250200 Gossypium hirsutum HOM05D004752 ORTHO05D005523 1.7e-24 115.9 90 66.7
Gohir.D05G251900 Gossypium hirsutum HOM05D004752 ORTHO05D005523 1.7e-24 115.9 88 67.0
Gorai.009G263300 Gossypium raimondii HOM05D004752 ORTHO05D005523 1.7e-24 115.9 88 67.0
Phvul.007G240400 Phaseolus vulgaris HOM05D004752 ORTHO05D005523 1.7e-24 115.9 97 63.9
ClCG09G009960 Citrullus lanatus HOM05D004752 ORTHO05D005523 2.2e-24 115.5 98 63.3
FvH4_5g38800 Fragaria vesca HOM05D004752 ORTHO05D005523 2.8e-24 115.2 97 59.8
FAN04G0063 Fragaria x ananassa HOM05D004752 ORTHO05D005523 2.8e-24 115.2 97 60.8
FAN18G0635 Fragaria x ananassa HOM05D004752 ORTHO05D005523 2.8e-24 115.2 97 59.8
TAR628G0740 Trochodendron aralioides HOM05D004752 ORTHO05D005523 3.7e-24 114.8 97 64.9
Actinidia29420 Actinidia chinensis HOM05D004752 ORTHO05D005523 4.8e-24 114.4 100 62.0
vmacro00760 Vaccinium macrocarpon HOM05D004752 ORTHO05D005523 4.8e-24 114.4 95 61.1
Ciclev10002954m.g Citrus clementina HOM05D004752 ORTHO05D005523 6.3e-24 114.0 87 65.5
Duzib177G0553 Durio zibethinus HOM05D004752 ORTHO05D005523 6.3e-24 114.0 90 64.4
Eucgr.F02586 Eucalyptus grandis HOM05D004752 ORTHO05D005523 6.3e-24 114.0 78 73.1
Gohir.A05G250100 Gossypium hirsutum HOM05D004752 ORTHO05D005523 6.3e-24 114.0 98 62.2
Gohir.D09G112701 Gossypium hirsutum HOM05D004752 ORTHO05D005523 6.3e-24 114.0 89 66.3
Nitab4.5_0000365g0250 Nicotiana tabacum HOM05D004752 ORTHO05D005523 6.3e-24 114.0 87 63.2
MELO3C008132.2 Cucumis melo HOM05D004752 ORTHO05D005523 8.2e-24 113.6 98 63.3
Migut.C01286 Erythranthe guttata HOM05D004752 ORTHO05D005523 8.2e-24 113.6 98 64.3
Gohir.D09G112900 Gossypium hirsutum HOM05D004752 ORTHO05D005523 1.4e-23 112.8 90 65.6
AT1G72020 Arabidopsis thaliana HOM05D004752 ORTHO05D005523 1.8e-23 112.5 88 65.9
MSTRG.25459 Avicennia marina HOM05D004752 ORTHO05D005523 1.8e-23 112.5 93 60.2
CsaV3_2G033590 Cucumis sativus L. HOM05D004752 ORTHO05D005523 1.8e-23 112.5 98 62.2
SalBow6G5456 Salvia bowleyana HOM05D004752 ORTHO05D005523 1.8e-23 112.5 94 60.6
SalBow6G7070 Salvia bowleyana HOM05D004752 ORTHO05D005523 1.8e-23 112.5 94 60.6
HanXRQChr04g0109661 Helianthus annuus HOM05D004752 ORTHO05D005523 3.1e-23 111.7 94 59.6
Potri.013G110600 Populus trichocarpa HOM05D004752 ORTHO05D005523 3.1e-23 111.7 99 61.6
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 3.1e-23 111.7 77 68.8
PGR102G0675 Punica granatum HOM05D004752 ORTHO05D005523 4.1e-23 111.3 101 60.4
Gorai.006G130300 Gossypium raimondii HOM05D004752 ORTHO05D005523 7.0e-23 110.5 91 65.9
Lj4E474T0 Lonicera japonica HOM05D004752 ORTHO05D005523 7.0e-23 110.5 98 61.2
Sed0006132 Sechium edule HOM05D004752 ORTHO05D005523 7.0e-23 110.5 98 62.2
Ca_21523_v3 Cicer arietinum L. HOM05D004752 ORTHO05D005523 9.1e-23 110.2 97 59.8
AL2G31650 Arabidopsis lyrata HOM05D004752 ORTHO05D005523 1.2e-22 109.8 88 67.0
AUR62022705 Chenopodium quinoa HOM05D004752 ORTHO05D005523 1.2e-22 109.8 90 61.1
Hund27095 Selenicereus undatus HOM05D004752 ORTHO05D005523 1.2e-22 109.8 98 59.2
Sc23g0001310 Simmondsia chinensis HOM05D004752 ORTHO05D005523 1.2e-22 109.8 98 59.2
CiPaw.05G229600 Carya illinoinensis HOM05D004752 ORTHO05D005523 1.6e-22 109.4 87 64.4
Manes.18G103200 Manihot esculenta HOM05D004752 ORTHO05D005523 1.6e-22 109.4 99 58.6
Actinidia03509 Actinidia chinensis HOM05D004752 ORTHO05D005523 2.0e-22 109.0 89 62.9
ATR0071G025 Amborella trichopoda HOM05D004752 ORTHO05D005523 2.0e-22 109.0 86 66.3
CiPaw.06G024200 Carya illinoinensis HOM05D004752 ORTHO05D005523 2.0e-22 109.0 97 60.8
FAN02G3062 Fragaria x ananassa HOM05D004752 ORTHO05D005523 2.0e-22 109.0 74 70.3
Sabra19G0093300 Salix brachista HOM05D004752 ORTHO05D005523 2.0e-22 109.0 76 71.1
DCAR_011527 Daucus carota HOM05D004752 ORTHO05D005523 2.7e-22 108.6 98 59.2
Sc01g0001860 Simmondsia chinensis HOM05D004752 ORTHO05D005523 2.7e-22 108.6 88 61.4
EL10Ac1g00098 Beta vulgaris HOM05D004752 ORTHO05D005523 3.5e-22 108.2 98 61.2
Rhsim06G0089000 Rhododendron simsii HOM05D004752 ORTHO05D005523 3.5e-22 108.2 95 56.8
Rhsim11G0057800 Rhododendron simsii HOM05D004752 ORTHO05D005523 3.5e-22 108.2 95 56.8
PGSC0003DMG400009277 Solanum tuberosum HOM05D004752 ORTHO05D005523 5.9e-22 107.5 85 67.1
PGSC0003DMG400026069 Solanum tuberosum HOM05D004752 ORTHO05D005523 7.7e-22 107.1 98 61.2
MD00G1104100 Malus domestica HOM05D004752 ORTHO05D005523 1.3e-21 106.3 87 60.9
Peaxi162Scf00391g00436 Petunia axillaris HOM05D004752 ORTHO05D005523 1.3e-21 106.3 92 58.7
Zm00001eb082670 Zea mays HOM05D004752 ORTHO05D005523 1.3e-21 106.3 82 61.0
FAN18G0607 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.7e-21 105.9 74 68.9
FAN18G1874 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.7e-21 105.9 74 68.9
FAN18G2073 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.7e-21 105.9 74 68.9
MBI17_g21481_MAGBIO Magnolia biondii HOM05D004752 ORTHO05D005523 1.7e-21 105.9 82 63.4
Manes.02G194400 Manihot esculenta HOM05D004752 ORTHO05D005523 1.7e-21 105.9 97 58.8
Nitab4.5_0003010g0020 Nicotiana tabacum HOM05D004752 ORTHO05D005523 2.9e-21 105.1 87 62.1
Aqoxy5G02666 Aquilegia oxysepala HOM05D004752 ORTHO05D005523 3.8e-21 104.8 103 54.4
Lsat_1_v5_gn_1_12481 Lactuca sativa HOM05D004752 ORTHO05D005523 6.5e-21 104.0 92 59.8
Sopen06g023680 Solanum pennellii HOM05D004752 ORTHO05D005523 8.5e-21 103.6 95 58.9
TWI59G0745 Tripterygium wilfordii HOM05D004752 ORTHO05D005523 8.5e-21 103.6 99 56.6
CDE04G0573 Ceratophyllum demersum HOM05D004752 ORTHO05D005523 1.1e-20 103.2 97 57.7
CDE07G1886 Ceratophyllum demersum HOM05D004752 ORTHO05D005523 1.1e-20 103.2 97 57.7
PSO170G1458 Papaver somniferum HOM05D004752 ORTHO05D005523 1.5e-20 102.8 98 59.2
Solyc06g065180.3 Solanum lycopersicum HOM05D004752 ORTHO05D005523 1.5e-20 102.8 95 57.9
arahy.Tifrunner.gnm1.ann1.0CG85F Arachis hypogaea HOM05D004752 ORTHO05D005523 1.9e-20 102.4 89 60.7
arahy.Tifrunner.gnm1.ann1.S21HCY Arachis hypogaea HOM05D004752 ORTHO05D005523 1.9e-20 102.4 89 60.7
Os04g0432600 Oryza sativa ssp. japonica HOM05D004752 ORTHO05D005523 2.5e-20 102.1 84 59.5
PSO782G1292 Papaver somniferum HOM05D004752 ORTHO05D005523 2.5e-20 102.1 98 59.2
AUR62004632 Chenopodium quinoa HOM05D004752 ORTHO05D005523 4.2e-20 101.3 102 53.9
Rhsim11G0056800 Rhododendron simsii HOM05D004752 ORTHO05D005523 4.2e-20 101.3 70 70.0
HPP92_000079 Vanilla planifolia HOM05D004752 ORTHO05D005523 4.2e-20 101.3 61 75.4
TWI14G1278 Tripterygium wilfordii HOM05D004752 ORTHO05D005523 5.5e-20 100.9 99 55.6
CANSAT80G1056 Cannabis sativa HOM05D004752 ORTHO05D005523 3.6e-19 98.2 102 57.8
Duzib177G0197 Durio zibethinus HOM05D004752 ORTHO05D005523 8.0e-19 97.1 100 54.0
SEGI_26065 Sequoiadendron giganteum HOM05D004752 ORTHO05D005523 1.0e-18 96.7 91 56.0
MD15G1358900 Malus domestica HOM05D004752 ORTHO05D005523 1.4e-18 96.3 87 56.3
Gohir.A09G115700 Gossypium hirsutum HOM05D004752 ORTHO05D005523 2.0e-17 92.4 64 70.3
GSVIVG01012767001 Vitis vinifera HOM05D004752 ORTHO05D005523 2.0e-17 92.4 97 51.5
Zm00001eb243470 Zea mays HOM05D004752 ORTHO05D005523 2.0e-17 92.4 86 52.3
SHI09031 Sapria himalayana HOM05D004752 ORTHO05D005523 5.4e-15 84.3 61 63.9
AagrBONN_evm.TU.Sc2ySwM_117.1418 Anthoceros agrestis HOM05D004752 ORTHO05D005523 2.1e-11 72.4 77 45.5
Mapoly0001s0236 Marchantia polymorpha HOM05D004752 ORTHO05D005523 2.8e-08 62.0 102 41.2
CBR_g3658 Chara braunii HOM05D004752 ORTHO05D005523 4.9e-08 61.2 80 42.5
Pp3c19_1780 Physcomitrium patens HOM05D004752 ORTHO05D005523 8.3e-08 60.5 86 37.2


User provided reference genes

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