Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2088 Utricularia gibba HOM05D004095 ORTHO05D003197 1.1e-213 746.5 408 100.0
unitig_747.g21527 Utricularia gibba HOM05D002344 ORTHO05D002954 4.7e-60 236.1 387 45.2
MSTRG.1174 Avicennia marina HOM05D004095 ORTHO05D003197 2.4e-27 127.5 420 30.5
MSTRG.25264 Avicennia marina HOM05D004095 ORTHO05D003197 1.5e-26 124.8 440 27.0
Oeu026642.1 Olea europaea HOM05D004095 ORTHO05D003197 6.5e-25 119.4 444 27.0
Oeu061977.1 Olea europaea HOM05D004095 ORTHO05D003197 1.5e-21 108.2 417 26.6
SalBow7G2790 Salvia bowleyana HOM05D004095 ORTHO05D003197 2.8e-20 104.0 435 30.3
CSS0006390 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.5e-18 98.2 410 26.6
CSS0032179 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 2.6e-18 97.4 410 26.6
Migut.C00862 Erythranthe guttata HOM05D004095 ORTHO05D003197 3.4e-18 97.1 421 27.1
unitig_749.g13901 Utricularia gibba HOM05D004095 ORTHO05D003197 7.6e-18 95.9 298 28.5
Cc10_g01420 Coffea canephora HOM05D004095 ORTHO05D003197 6.5e-17 92.8 431 25.8
PGSC0003DMG400009946 Solanum tuberosum HOM05D004095 ORTHO05D003197 1.1e-16 92.0 416 26.2
Lj4A21T58 Lonicera japonica HOM05D004095 ORTHO05D003197 1.4e-16 91.7 271 32.8
Sopen04g035350 Solanum pennellii HOM05D004095 ORTHO05D003197 9.3e-16 89.0 416 25.2
Solyc04g081730.3 Solanum lycopersicum HOM05D004095 ORTHO05D003197 2.1e-15 87.8 418 25.6
CSS0036757 Camellia sinensis var. sinensis HOM05D004095 ORTHO05D003197 1.3e-14 85.1 321 27.4
CsaV3_2G024280 Cucumis sativus L. HOM05D004095 ORTHO05D003197 4.8e-12 76.6 415 24.6
Gohir.D03G007700 Gossypium hirsutum HOM05D004095 ORTHO05D003197 8.2e-12 75.9 268 27.2
Gorai.003G007900 Gossypium raimondii HOM05D004095 ORTHO05D003197 1.1e-11 75.5 414 24.4
Potri.002G019200 Populus trichocarpa HOM05D004095 ORTHO05D003197 3.1e-11 73.9 334 26.3
MELO3C011353.2 Cucumis melo HOM05D004095 ORTHO05D003197 4.1e-11 73.6 273 28.2
Sabra02G0015500 Salix brachista HOM05D004095 ORTHO05D003197 4.1e-11 73.6 88 48.9
ClCG08G014140 Citrullus lanatus HOM05D004095 ORTHO05D003197 6.9e-11 72.8 273 27.1
MSTRG.22345 Avicennia marina HOM05D004095 ORTHO05D003197 9.0e-11 72.4 414 23.2
CAN.G311.49 Capsicum annuum HOM05D004095 ORTHO05D003197 1.2e-10 72.0 416 23.6
Oeu007365.1 Olea europaea HOM05D004095 ORTHO05D003197 1.5e-10 71.6 323 27.9
Lalb_Chr08g0246191 Lupinus albus HOM05D004095 ORTHO05D003197 2.6e-10 70.9 78 47.4
Gohir.A02G172400 Gossypium hirsutum HOM05D004095 ORTHO05D003197 4.5e-10 70.1 268 26.1
SGA_v2.0_scaffold11G05941 Striga asiatica HOM05D004095 ORTHO05D003197 5.9e-10 69.7 271 28.4
arahy.Tifrunner.gnm1.ann1.I59WU7 Arachis hypogaea HOM05D004095 ORTHO05D003197 1.0e-09 68.9 94 44.7
Eucgr.I02328 Eucalyptus grandis HOM05D004095 ORTHO05D003197 1.3e-09 68.6 270 28.9
Sed0017695 Sechium edule HOM05D004095 ORTHO05D003197 1.3e-09 68.6 279 26.5
TWI12G1115 Tripterygium wilfordii HOM05D004095 ORTHO05D003197 1.3e-09 68.6 411 24.8
arahy.Tifrunner.gnm1.ann1.VNIF6J Arachis hypogaea HOM05D004095 ORTHO05D003197 2.2e-09 67.8 77 48.1
Nn6g31993 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.2e-09 67.8 288 26.4
AUR62040566 Chenopodium quinoa HOM05D004095 ORTHO05D003197 2.9e-09 67.4 283 28.6
Manes.18G010907 Manihot esculenta HOM05D004095 ORTHO05D003197 2.9e-09 67.4 337 26.1
TAR381G0731 Trochodendron aralioides HOM05D004095 ORTHO05D003197 3.8e-09 67.0 270 29.3
Eucgr.H00956 Eucalyptus grandis HOM05D066110 ORTHO05D003197 5.0e-09 66.6 78 47.4
COL.COLO4_22466 Corchorus olitorius HOM05D004095 ORTHO05D003197 6.5e-09 66.2 269 26.8
Hund01666 Selenicereus undatus HOM05D004095 ORTHO05D003197 6.5e-09 66.2 302 26.8
TAR628G1526 Trochodendron aralioides HOM05D004095 ORTHO05D003197 8.5e-09 65.9 432 23.8
DCAR_009498 Daucus carota HOM05D004095 ORTHO05D003197 1.1e-08 65.5 329 26.7
CiPaw.07G146700 Carya illinoinensis HOM05D004095 ORTHO05D003197 1.4e-08 65.1 316 25.9
Aa31LG7G4540 Aethionema arabicum HOM05D008819 ORTHO05D003197 1.9e-08 64.7 318 26.1
Duzib093G1456 Durio zibethinus HOM05D004095 ORTHO05D003197 2.5e-08 64.3 330 25.2
Cfa013982 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.2e-08 63.5 92 38.0
Ciclev10002009m.g Citrus clementina HOM05D004095 ORTHO05D003197 4.2e-08 63.5 79 45.6
Duzib187G0006 Durio zibethinus HOM05D004095 ORTHO05D003197 4.2e-08 63.5 269 27.9
COL.COLO4_26117 Corchorus olitorius HOM05D004095 ORTHO05D003197 7.2e-08 62.8 98 37.8
Sed0007913 Sechium edule HOM05D004095 ORTHO05D003197 9.4e-08 62.4 328 26.2
TAR376G0784 Trochodendron aralioides HOM05D004095 ORTHO05D003197 9.4e-08 62.4 305 32.1
AUR62041467 Chenopodium quinoa HOM05D004095 ORTHO05D003197 1.2e-07 62.0 281 26.3
AL2G35870 Arabidopsis lyrata HOM05D008819 ORTHO05D003197 1.6e-07 61.6 94 35.1
Haze_22667 Corylus avellana HOM05D004095 ORTHO05D003197 1.6e-07 61.6 269 27.9
BcaC08g47079 Brassica carinata HOM05D008819 ORTHO05D003197 2.7e-07 60.8 92 37.0
Gorai.009G193100 Gossypium raimondii HOM05D004095 ORTHO05D003197 2.7e-07 60.8 81 39.5
MBI05_g23379_MAGBIO Magnolia biondii HOM05D004095 ORTHO05D003197 3.6e-07 60.5 81 42.0
AT1G75860 Arabidopsis thaliana HOM05D008819 ORTHO05D003197 4.6e-07 60.1 94 35.1
CARHR069410 Cardamine hirsuta HOM05D008819 ORTHO05D003197 4.6e-07 60.1 92 37.0
Cfa007004 Carpinus fangiana HOM05D004095 ORTHO05D003197 4.6e-07 60.1 421 23.0
Nitab4.5_0006505g0050 Nicotiana tabacum HOM05D004095 ORTHO05D003197 4.6e-07 60.1 263 25.1
Prupe.1G362800 Prunus persica HOM05D004095 ORTHO05D003197 4.6e-07 60.1 77 40.3
Thecc.08G047900 Theobroma cacao HOM05D004095 ORTHO05D003197 4.6e-07 60.1 85 37.6
Gohir.D05G187800 Gossypium hirsutum HOM05D004095 ORTHO05D003197 6.1e-07 59.7 81 38.3
PSO541G2818 Papaver somniferum HOM05D004095 ORTHO05D003197 6.1e-07 59.7 288 23.3
RcHm_v2.0_Chr2g0098961 Rosa chinensis HOM05D024588 ORTHO05D003197 6.1e-07 59.7 96 40.6
EL10Ac3g06641 Beta vulgaris HOM05D004095 ORTHO05D003197 7.9e-07 59.3 279 26.5
Hma1.2p1_0023F.1_g015650 Hydrangea macrophylla HOM05D004095 ORTHO05D003197 7.9e-07 59.3 273 26.0
CiPaw.08G067700 Carya illinoinensis HOM05D004095 ORTHO05D003197 1.0e-06 58.9 328 25.3
Duzib264G0091 Durio zibethinus HOM05D004095 ORTHO05D003197 1.0e-06 58.9 330 26.7
SGA_v2.0_scaffold19G08554 Striga asiatica HOM05D004095 ORTHO05D003197 1.0e-06 58.9 413 22.8
Aqoxy5G01820 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 1.4e-06 58.5 274 25.5
Haze_03728 Corylus avellana HOM05D004095 ORTHO05D003197 1.4e-06 58.5 444 25.5
Peaxi162Scf00860g00422 Petunia axillaris HOM05D004095 ORTHO05D003197 1.4e-06 58.5 281 24.9
HPP92_007327 Vanilla planifolia HOM05D004095 ORTHO05D003197 1.8e-06 58.2 356 24.2
Nn5g30782 Nelumbo nucifera HOM05D004095 ORTHO05D003197 2.3e-06 57.8 78 39.7
Dinv31870 Davidia involucrata HOM05D004095 ORTHO05D003197 3.0e-06 57.4 311 27.0
Duzib041G0318 Durio zibethinus HOM05D004095 ORTHO05D003197 3.0e-06 57.4 271 25.1
Gohir.A05G185000 Gossypium hirsutum HOM05D004095 ORTHO05D003197 3.0e-06 57.4 80 37.5
Aqoxy6G02168 Aquilegia oxysepala HOM05D004095 ORTHO05D003197 3.9e-06 57.0 82 39.0
RcHm_v2.0_Chr6g0303321 Rosa chinensis HOM05D004095 ORTHO05D003197 3.9e-06 57.0 88 36.4
A01p02760 Brassica napus HOM05D004095 ORTHO05D003197 5.1e-06 56.6 84 35.7
C01p03060 Brassica napus HOM05D004095 ORTHO05D003197 5.1e-06 56.6 83 36.1
BraA01t00262Z Brassica rapa HOM05D004095 ORTHO05D003197 5.1e-06 56.6 84 35.7
FAN19G1292 Fragaria x ananassa HOM05D024588 ORTHO05D003197 6.7e-06 56.2 91 40.7
VMungo0647G0628 Vigna mungo HOM05D013708 ORTHO05D003197 6.7e-06 56.2 56 48.2
Cpa.g.sc26.299 Carica papaya HOM05D004095 ORTHO05D003197 8.8e-06 55.8 91 35.2
Thhalv10022767m.g Eutrema salsugineum HOM05D004095 ORTHO05D003197 8.8e-06 55.8 79 36.7
FAN15G2156 Fragaria x ananassa HOM05D004095 ORTHO05D003197 8.8e-06 55.8 83 37.3
Sabra05G0187500 Salix brachista HOM05D004095 ORTHO05D003197 8.8e-06 55.8 271 24.4


User provided reference genes

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