Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 7.4e-121 437.2 215 100.0
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 1.8e-79 299.7 203 71.9
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 1.6e-78 296.6 204 70.1
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 7.7e-78 294.3 202 69.3
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 1.7e-77 293.1 197 71.1
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.9e-77 292.4 202 70.3
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 3.8e-77 292.0 197 70.6
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 1.5e-76 290.0 196 71.4
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 2.5e-76 289.3 200 70.5
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.5e-76 289.3 197 71.6
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 3.2e-76 288.9 202 69.3
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 5.5e-76 288.1 186 73.7
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 5.5e-76 288.1 202 68.8
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 7.2e-76 287.7 202 68.3
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 1.2e-75 287.0 197 71.1
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 1.2e-75 287.0 197 70.6
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 1.6e-75 286.6 197 71.1
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 1.6e-75 286.6 197 72.1
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 8.0e-75 284.3 186 73.1
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.0e-74 283.9 202 68.3
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.0e-74 283.9 186 72.0
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 3.0e-74 282.3 186 72.0
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 4.0e-74 282.0 202 67.8
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 5.2e-74 281.6 202 66.8
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 5.2e-74 281.6 202 67.8
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 5.2e-74 281.6 202 67.8
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 6.8e-74 281.2 190 71.6
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 6.8e-74 281.2 197 69.5
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.2e-73 280.4 186 72.0
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.2e-73 280.4 186 72.6
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.2e-73 280.4 196 68.9
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 1.5e-73 280.0 198 68.7
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 1.5e-73 280.0 189 70.9
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 2.6e-73 279.3 204 68.1
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 3.4e-73 278.9 189 69.8
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 5.7e-73 278.1 201 66.2
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 5.7e-73 278.1 186 72.0
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 5.7e-73 278.1 186 72.0
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 9.8e-73 277.3 201 67.7
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 1.3e-72 276.9 191 69.6
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 2.2e-72 276.2 184 68.5
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 2.2e-72 276.2 190 68.9
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 2.8e-72 275.8 198 65.7
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 3.7e-72 275.4 189 69.8
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 4.8e-72 275.0 197 68.0
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 6.3e-72 274.6 193 68.4
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 8.3e-72 274.2 186 71.0
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 8.3e-72 274.2 189 68.8
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 1.1e-71 273.9 199 65.3
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 1.1e-71 273.9 190 68.9
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.4e-71 273.5 198 65.7
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.8e-71 273.1 198 65.2
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 1.8e-71 273.1 199 66.3
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.4e-71 272.7 186 70.4
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 3.1e-71 272.3 199 64.3
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 3.1e-71 272.3 186 71.0
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 3.1e-71 272.3 186 71.0
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 3.1e-71 272.3 181 69.1
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 4.1e-71 271.9 176 72.7
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.1e-71 271.9 184 69.6
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 4.1e-71 271.9 202 65.8
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 5.4e-71 271.6 189 68.3
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 5.4e-71 271.6 189 68.3
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 9.1e-71 270.8 186 69.4
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 9.1e-71 270.8 197 67.0
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 2.7e-70 269.2 204 65.7
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.7e-70 269.2 186 69.9
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 2.7e-70 269.2 203 64.5
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 3.5e-70 268.9 197 67.0
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 4.5e-70 268.5 188 68.6
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 4.5e-70 268.5 186 68.8
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 4.5e-70 268.5 189 66.7
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 5.9e-70 268.1 190 66.8
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 5.9e-70 268.1 181 69.1
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.7e-69 266.5 194 64.9
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 2.9e-69 265.8 200 64.5
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 6.5e-69 264.6 176 70.5
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 6.5e-69 264.6 186 68.8
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.1e-68 263.8 206 63.6
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 1.5e-68 263.5 176 69.9
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.5e-68 263.5 203 61.1
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.9e-68 263.1 176 70.5
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 3.2e-68 262.3 200 63.5
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 1.6e-67 260.0 190 65.3
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 6.1e-67 258.1 192 63.5
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 6.1e-67 258.1 176 68.8
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 6.1e-67 258.1 203 58.6
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 1.0e-66 257.3 190 63.7
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 4.0e-66 255.4 199 62.8
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 4.0e-66 255.4 197 62.4
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 6.8e-66 254.6 199 62.3
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 8.8e-66 254.2 199 62.3
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 1.5e-65 253.4 188 64.9
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 3.4e-65 252.3 188 64.9
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 3.4e-65 252.3 203 58.1
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 9.8e-65 250.8 184 65.2
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 2.2e-64 249.6 176 68.2
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 4.9e-64 248.4 176 68.8
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 8.3e-64 247.7 199 61.3
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.4e-63 246.9 190 64.7
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 2.4e-63 246.1 199 60.8
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.1e-63 245.7 199 60.8
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 5.4e-63 245.0 188 64.4
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 9.2e-63 244.2 190 64.2
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 3.5e-62 242.3 201 61.7
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 1.0e-61 240.7 197 59.9
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 5.0e-61 238.4 202 59.9
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 9.5e-60 234.2 215 58.6
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 4.7e-59 231.9 190 57.4
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 6.8e-58 228.0 181 59.1
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 8.9e-58 227.6 162 67.9
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 1.5e-57 226.9 186 59.1
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 2.2e-56 223.0 165 64.2
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 1.8e-55 219.9 207 52.7
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 9.2e-55 217.6 193 57.0
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 1.1e-52 210.7 154 70.1
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 3.3e-52 209.1 212 51.9
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 2.6e-49 199.5 184 53.8
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 2.0e-46 189.9 202 45.5
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.7e-45 186.8 143 64.3
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 8.6e-45 184.5 185 51.4
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 2.5e-44 183.0 150 62.7
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 2.8e-43 179.5 179 47.5
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 4.9e-40 168.7 211 37.9
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 8.3e-40 167.9 151 57.0
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.2e-38 164.1 109 71.6
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 4.6e-38 162.2 198 40.9
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 5.2e-34 148.7 99 66.7
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 8.6e-29 131.3 190 37.4
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 1.1e-28 131.0 100 66.0
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.1e-28 131.0 130 53.8
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 1.4e-26 124.0 79 77.2
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 1.1e-23 114.4 88 67.0
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 2.3e-21 106.7 91 54.9
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 4.3e-20 102.4 144 37.5
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 3.4e-17 92.8 58 79.3
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.1e-12 77.8 62 61.3
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 5.8e-09 65.5 44 70.5
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 4.6e-06 55.8 225 28.4


User provided reference genes

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