Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1938 Utricularia gibba HOM05D013426 ORTHO05D000349 3.5e-79 298.1 142 100.0
unitig_748.g7059 Utricularia gibba HOM05D000482 ORTHO05D000349 7.8e-10 67.8 57 66.7
ECA246G1262 Erigeron canadensis HOM05D000482 ORTHO05D000349 1.3e-09 67.0 57 66.7
SGA_v2.0_scaffold253G45182 Striga asiatica HOM05D000482 ORTHO05D000349 1.3e-09 67.0 57 66.7
Lsat_1_v5_gn_0_27321 Lactuca sativa HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Lj7C611G9 Lonicera japonica HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Nitab4.5_0000519g0030 Nicotiana tabacum HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Nitab4.5_0007375g0070 Nicotiana tabacum HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Oeu035241.1 Olea europaea HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Oeu062526.1 Olea europaea HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Peaxi162Scf00420g00646 Petunia axillaris HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Solyc02g094280.4 Solanum lycopersicum HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
Sopen02g038920 Solanum pennellii HOM05D000482 ORTHO05D000349 1.7e-09 66.6 57 64.9
CAN.G473.121 Capsicum annuum HOM05D000482 ORTHO05D000349 2.3e-09 66.2 57 63.2
MSTRG.3065 Avicennia marina HOM05D000482 ORTHO05D000349 2.9e-09 65.9 57 61.4
Cc09_g05220 Coffea canephora HOM05D000482 ORTHO05D000349 2.9e-09 65.9 57 61.4
Migut.F00048 Erythranthe guttata HOM05D000482 ORTHO05D000349 2.9e-09 65.9 57 63.2
ClCG05G013710 Citrullus lanatus HOM05D000482 ORTHO05D000349 5.0e-09 65.1 57 63.2
MELO3C014900.2 Cucumis melo HOM05D000482 ORTHO05D000349 5.0e-09 65.1 57 63.2
CsaV3_3G026880 Cucumis sativus L. HOM05D000482 ORTHO05D000349 5.0e-09 65.1 57 63.2
DCAR_000954 Daucus carota HOM05D000482 ORTHO05D000349 5.0e-09 65.1 57 63.2
Sed0000748 Sechium edule HOM05D000482 ORTHO05D000349 5.0e-09 65.1 57 63.2
PGSC0003DMG400020248 Solanum tuberosum HOM05D000482 ORTHO05D000349 5.0e-09 65.1 57 63.2
HanXRQChr17g0551541 Helianthus annuus HOM05D000482 ORTHO05D000349 6.6e-09 64.7 57 61.4
Sed0003973 Sechium edule HOM05D000482 ORTHO05D000349 6.6e-09 64.7 57 61.4
SalBow4G2496 Salvia bowleyana HOM05D000482 ORTHO05D000349 8.6e-09 64.3 57 61.4
Lsat_1_v5_gn_4_184861 Lactuca sativa HOM05D000482 ORTHO05D000349 1.1e-08 63.9 56 64.3
QL02p070873 Quercus lobata HOM05D000482 ORTHO05D000349 1.1e-08 63.9 57 63.2
Cfa007208 Carpinus fangiana HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
Ca_26663_v3 Cicer arietinum L. HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
Haze_14897 Corylus avellana HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
ECA232G2032 Erigeron canadensis HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
Eucgr.I01628 Eucalyptus grandis HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
Hma1.2p1_0525F.1_g172550 Hydrangea macrophylla HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 59.6
Lalb_Chr00c01g0403791 Lupinus albus HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
Medtr7g028250 Medicago truncatula HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
Psat3g162840 Pisum sativum HOM05D000482 ORTHO05D000349 1.5e-08 63.5 57 61.4
FvH4_6g53820 Fragaria vesca HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
FAN02G0345 Fragaria x ananassa HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
FAN09G4262 Fragaria x ananassa HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
FAN14G4535 Fragaria x ananassa HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
Glyma.16G054200 Glycine max HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
Glyma.19G094800 Glycine max HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
HanXRQChr09g0256431 Helianthus annuus HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 63.2
Lj1g0010827 Lotus japonicus HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
MD09G1008400 Malus domestica HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
MD17G1002400 Malus domestica HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
Manes.11G087100 Manihot esculenta HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
Prupe.3G308600 Prunus persica HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
RcHm_v2.0_Chr2g0175951 Rosa chinensis HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
THA.LOC104825632 Tarenaya hassleriana HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
VMungo1383G0053 Vigna mungo HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
GSVIVG01033058001 Vitis vinifera HOM05D000482 ORTHO05D000349 1.9e-08 63.2 57 59.6
Cpa.g.sc70.119 Carica papaya HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 59.6
DCAR_014496 Daucus carota HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 63.2
Dinv25647 Davidia involucrata HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 57.9
PGR142G0589 Punica granatum HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 57.9
Rhsim10G0004800 Rhododendron simsii HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 57.9
Hund04232 Selenicereus undatus HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 59.6
TAR374G0090 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 59.6
TAR622G1293 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 59.6
vmacro05973 Vaccinium macrocarpon HOM05D000482 ORTHO05D000349 2.5e-08 62.8 57 57.9
Ah.02g119880 Amaranthus hybridus HOM05D000482 ORTHO05D000349 3.3e-08 62.4 57 57.9
THA.LOC104811089 Tarenaya hassleriana HOM05D000482 ORTHO05D000349 3.3e-08 62.4 57 59.6
Thecc.04G040200 Theobroma cacao HOM05D000482 ORTHO05D000349 3.3e-08 62.4 57 57.9
Actinidia05890 Actinidia chinensis HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 57.9
Actinidia36215 Actinidia chinensis HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 57.9
arahy.Tifrunner.gnm1.ann1.L877Z8 Arachis hypogaea HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 59.6
arahy.Tifrunner.gnm1.ann1.WJ50T5 Arachis hypogaea HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 59.6
CSS0018457 Camellia sinensis var. sinensis HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 56.1
Ciclev10014497m.g Citrus clementina HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 57.9
Duzib147G1244 Durio zibethinus HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 57.9
Duzib187G0763 Durio zibethinus HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 57.9
Gohir.A10G071400 Gossypium hirsutum HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 57.9
Gorai.011G086700 Gossypium raimondii HOM05D000482 ORTHO05D000349 4.3e-08 62.0 57 57.9
CANSAT64G0268 Cannabis sativa HOM05D000482 ORTHO05D000349 5.6e-08 61.6 57 57.9
CiPaw.04G039300 Carya illinoinensis HOM05D000482 ORTHO05D000349 5.6e-08 61.6 56 60.7
COL.COLO4_13291 Corchorus olitorius HOM05D000482 ORTHO05D000349 5.6e-08 61.6 57 56.1
MBI11_g24607_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 5.6e-08 61.6 57 59.6
Potri.001G327300 Populus trichocarpa HOM05D000482 ORTHO05D000349 5.6e-08 61.6 57 57.9
Sp2g16140 Schrenkiella parvula HOM05D000482 ORTHO05D000349 5.6e-08 61.6 57 59.6
Aa31LG2G5570 Aethionema arabicum HOM05D000482 ORTHO05D000349 7.3e-08 61.2 57 57.9
Aqoxy3G01625 Aquilegia oxysepala HOM05D000482 ORTHO05D000349 7.3e-08 61.2 57 57.9
EL10Ac6g15437 Beta vulgaris HOM05D000482 ORTHO05D000349 7.3e-08 61.2 57 57.9
FAN05G5561 Fragaria x ananassa HOM05D000482 ORTHO05D000349 7.3e-08 61.2 57 57.9
Sabra16G0209600 Salix brachista HOM05D000482 ORTHO05D000349 7.3e-08 61.2 57 57.9
Sc03g0006350 Simmondsia chinensis HOM05D000482 ORTHO05D000349 7.3e-08 61.2 57 59.6
CSS0026851 Camellia sinensis var. sinensis HOM05D000482 ORTHO05D000349 9.5e-08 60.8 57 54.4
ATR0582G261 Amborella trichopoda HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 56.1
ATR0582G299 Amborella trichopoda HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 56.1
BcaB04g20628 Brassica carinata HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 57.9
BcaC04g23913 Brassica carinata HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 57.9
A09p03250 Brassica napus HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 57.9
C09p03450 Brassica napus HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 57.9
BolC9t53266H Brassica oleracea HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 57.9
BraA09t35963Z Brassica rapa HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 57.9
Thhalv10003758m.g Eutrema salsugineum HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 57.9
Gohir.D10G079600 Gossypium hirsutum HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 56.1
PSO017G2273 Papaver somniferum HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 56.1
PSO478G3562 Papaver somniferum HOM05D000482 ORTHO05D000349 1.2e-07 60.5 57 56.1
Phvul.001G088900 Phaseolus vulgaris HOM05D000482 ORTHO05D000349 1.2e-07 60.5 56 57.1
AL5G16050 Arabidopsis lyrata HOM05D000482 ORTHO05D000349 1.6e-07 60.1 57 56.1
AT3G27020 Arabidopsis thaliana HOM05D000482 ORTHO05D000349 1.6e-07 60.1 57 56.1
Carub.0005s0521 Capsella rubella HOM05D000482 ORTHO05D000349 1.6e-07 60.1 57 56.1
CARHR148210 Cardamine hirsuta HOM05D000482 ORTHO05D000349 1.6e-07 60.1 57 56.1
TWI60G1047 Tripterygium wilfordii HOM05D000482 ORTHO05D000349 1.6e-07 60.1 57 57.9
CDE05G0377 Ceratophyllum demersum HOM05D000482 ORTHO05D000349 2.8e-07 59.3 57 56.1
CDE05G0846 Ceratophyllum demersum HOM05D000482 ORTHO05D000349 2.8e-07 59.3 57 56.1
Ciclev10027961m.g Citrus clementina HOM05D000482 ORTHO05D000349 3.6e-07 58.9 57 56.1
RcHm_v2.0_Chr7g0225381 Rosa chinensis HOM05D000482 ORTHO05D000349 3.6e-07 58.9 57 56.1
HPP92_009898 Vanilla planifolia HOM05D000482 ORTHO05D000349 3.6e-07 58.9 57 56.1
AUR62029420 Chenopodium quinoa HOM05D000482 ORTHO05D000349 4.7e-07 58.5 57 56.1
Hma1.2p1_1934F.1_g308110 Hydrangea macrophylla HOM05D000482 ORTHO05D000349 4.7e-07 58.5 57 57.9
AUR62003421 Chenopodium quinoa HOM05D000482 ORTHO05D000349 6.1e-07 58.2 57 54.4
AT5G41000 Arabidopsis thaliana HOM05D000482 ORTHO05D000349 1.8e-06 56.6 55 58.2
Sp7g00910 Schrenkiella parvula HOM05D000482 ORTHO05D000349 1.8e-06 56.6 55 54.5
AL7G48544 Arabidopsis lyrata HOM05D000482 ORTHO05D000349 2.3e-06 56.2 55 56.4
CiPaw.06G043400 Carya illinoinensis HOM05D000482 ORTHO05D000349 2.3e-06 56.2 54 53.7
SEGI_41020 Sequoiadendron giganteum HOM05D000482 ORTHO05D000349 2.3e-06 56.2 57 56.1
ATR0582G324 Amborella trichopoda HOM05D000482 ORTHO05D000349 3.0e-06 55.8 57 54.4
MSTRG.15614 Avicennia marina HOM05D000482 ORTHO05D000349 3.0e-06 55.8 58 53.4
A04p15820 Brassica napus HOM05D000482 ORTHO05D000349 3.0e-06 55.8 55 54.5
BolC4t26622H Brassica oleracea HOM05D000482 ORTHO05D000349 3.0e-06 55.8 55 54.5
BraA04t17214Z Brassica rapa HOM05D000482 ORTHO05D006943 3.0e-06 55.8 55 54.5
MSTRG.8625 Avicennia marina HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 52.6
BcaB06g27762 Brassica carinata HOM05D000482 ORTHO05D000349 4.0e-06 55.5 55 54.5
CiPaw.03G058000 Carya illinoinensis HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 54.4
Migut.F01004 Erythranthe guttata HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 52.6
Manes.03G160200 Manihot esculenta HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 49.1
PSO104G0265 Papaver somniferum HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 54.4
Sabra12G0009400 Salix brachista HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 50.9
Sabra12G0036400 Salix brachista HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 50.9
Thecc.03G205200 Theobroma cacao HOM05D000482 ORTHO05D000349 4.0e-06 55.5 57 52.6
TPR.G24524 Trifolium pratense HOM05D000482 ORTHO05D000349 4.0e-06 55.5 53 52.8
Cpa.g.sc108.9 Carica papaya HOM05D000482 ORTHO05D000349 5.2e-06 55.1 58 50.0
Duzib068G0754 Durio zibethinus HOM05D000482 ORTHO05D000349 5.2e-06 55.1 56 53.6
Hma1.2p1_0094F.1_g047070 Hydrangea macrophylla HOM05D000482 ORTHO05D000349 5.2e-06 55.1 57 52.6
Lsat_1_v5_gn_9_50361 Lactuca sativa HOM05D000482 ORTHO05D000349 5.2e-06 55.1 57 50.9
Hund09688 Selenicereus undatus HOM05D000482 ORTHO05D000349 5.2e-06 55.1 57 50.9
Sc22g0004720 Simmondsia chinensis HOM05D000482 ORTHO05D000349 5.2e-06 55.1 73 43.8
unitig_35.g30200 Utricularia gibba HOM05D013426 ORTHO05D418828 5.2e-06 55.1 37 67.6
unitig_749.g13299 Utricularia gibba HOM05D013426 ORTHO05D421427 5.2e-06 55.1 37 67.6
arahy.Tifrunner.gnm1.ann1.53J40D Arachis hypogaea HOM05D000482 ORTHO05D000349 6.8e-06 54.7 57 50.9
EL10Ac3g05218 Beta vulgaris HOM05D000482 ORTHO05D000349 6.8e-06 54.7 57 50.9
Carub.0007s3449 Capsella rubella HOM05D000482 ORTHO05D000349 6.8e-06 54.7 55 52.7
Cpa.g.sc3.127 Carica papaya HOM05D000482 ORTHO05D000349 6.8e-06 54.7 56 53.6
Haze_18336 Corylus avellana HOM05D000482 ORTHO05D000349 6.8e-06 54.7 58 51.7
DCAR_008963 Daucus carota HOM05D000482 ORTHO05D000349 6.8e-06 54.7 57 50.9
HanXRQChr04g0110191 Helianthus annuus HOM05D000482 ORTHO05D000349 6.8e-06 54.7 57 50.9
Oeu037040.1 Olea europaea HOM05D000482 ORTHO05D000349 6.8e-06 54.7 56 53.6
Psat5g074240 Pisum sativum HOM05D000482 ORTHO05D000349 6.8e-06 54.7 57 50.9
Prupe.2G316000 Prunus persica HOM05D000482 ORTHO05D000349 6.8e-06 54.7 57 50.9
Sabra12G0006000 Salix brachista HOM05D000482 ORTHO05D000349 6.8e-06 54.7 54 51.9
Hund21034 Selenicereus undatus HOM05D000482 ORTHO05D000349 6.8e-06 54.7 57 50.9
GSVIVG01038611001 Vitis vinifera HOM05D000482 ORTHO05D000349 6.8e-06 54.7 55 52.7
Aa31LG1G13570 Aethionema arabicum HOM05D000482 ORTHO05D000349 8.9e-06 54.3 55 52.7
C04p50220 Brassica napus HOM05D000482 ORTHO05D000349 8.9e-06 54.3 55 52.7
CANSAT21G0313 Cannabis sativa HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 50.9
CARHR213380 Cardamine hirsuta HOM05D000482 ORTHO05D000349 8.9e-06 54.3 55 50.9
Ciclev10003961m.g Citrus clementina HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 49.1
Ciclev10019170m.g Citrus clementina HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 49.1
Haze_00267 Corylus avellana HOM05D000482 ORTHO05D000349 8.9e-06 54.3 56 51.8
ECA232G4878 Erigeron canadensis HOM05D000482 ORTHO05D000349 8.9e-06 54.3 56 51.8
Glyma.04G231900 Glycine max HOM05D000482 ORTHO05D000349 8.9e-06 54.3 56 51.8
Glyma.06G133000 Glycine max HOM05D000482 ORTHO05D000349 8.9e-06 54.3 56 51.8
Gohir.A05G392200 Gossypium hirsutum HOM05D000482 ORTHO05D000349 8.9e-06 54.3 58 50.0
Gohir.A09G186300 Gossypium hirsutum HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 52.6
Gohir.D04G024900 Gossypium hirsutum HOM05D000482 ORTHO05D000349 8.9e-06 54.3 58 50.0
Gohir.D09G181200 Gossypium hirsutum HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 52.6
Gorai.006G203200 Gossypium raimondii HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 52.6
Gorai.012G027400 Gossypium raimondii HOM05D000482 ORTHO05D000349 8.9e-06 54.3 58 50.0
HanXRQChr17g0534731 Helianthus annuus HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 50.9
MD07G1296400 Malus domestica HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 50.9
PSO729G0010 Papaver somniferum HOM05D000482 ORTHO05D000349 8.9e-06 54.3 56 55.4
Rhsim03G0212500 Rhododendron simsii HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 50.9
SEGI_11955 Sequoiadendron giganteum HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 50.9
Sc13g0010080 Simmondsia chinensis HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 52.6
vmacro06419 Vaccinium macrocarpon HOM05D000482 ORTHO05D000349 8.9e-06 54.3 57 50.9


User provided reference genes

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