Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g188 Utricularia gibba HOM05D005240 ORTHO05D006471 6.1e-82 307.4 148 100.0
Migut.F01799 Erythranthe guttata HOM05D005240 ORTHO05D006471 4.1e-38 161.8 108 67.6
MSTRG.355 Avicennia marina HOM05D005240 ORTHO05D006471 9.2e-38 160.6 114 66.7
SalBow3G0637 Salvia bowleyana HOM05D005240 ORTHO05D006471 1.2e-37 160.2 99 74.7
Cc09_g02730 Coffea canephora HOM05D005240 ORTHO05D006471 1.7e-36 156.4 108 67.6
Hma1.2p1_0453F.1_g156180 Hydrangea macrophylla HOM05D005240 ORTHO05D006471 5.0e-36 154.8 90 75.6
Manes.10G042700 Manihot esculenta HOM05D005240 ORTHO05D006471 1.1e-35 153.7 95 71.6
TAR636G2864 Trochodendron aralioides HOM05D005240 ORTHO05D006471 1.1e-35 153.7 98 70.4
SGA_v2.0_scaffold122G33245 Striga asiatica HOM05D005240 ORTHO05D006471 2.5e-35 152.5 111 62.2
Sopen10g001790 Solanum pennellii HOM05D005240 ORTHO05D006471 3.3e-35 152.1 99 69.7
Peaxi162Scf00373g00310 Petunia axillaris HOM05D005240 ORTHO05D006471 4.3e-35 151.8 104 65.4
Duzib114G0729 Durio zibethinus HOM05D005240 ORTHO05D006471 5.6e-35 151.4 100 67.0
Nitab4.5_0001721g0020 Nicotiana tabacum HOM05D005240 ORTHO05D006471 5.6e-35 151.4 106 65.1
Solyc10g005830.3 Solanum lycopersicum HOM05D005240 ORTHO05D006471 7.3e-35 151.0 99 69.7
TWI15G1019 Tripterygium wilfordii HOM05D005240 ORTHO05D006471 7.3e-35 151.0 89 74.2
CSS0026127 Camellia sinensis var. sinensis HOM05D005240 ORTHO05D006471 1.2e-34 150.2 100 66.0
CiPaw.01G276500 Carya illinoinensis HOM05D005240 ORTHO05D006471 1.2e-34 150.2 99 67.7
Nitab4.5_0000061g0160 Nicotiana tabacum HOM05D005240 ORTHO05D006471 1.2e-34 150.2 104 65.4
Prupe.2G218200 Prunus persica HOM05D005240 ORTHO05D006471 1.2e-34 150.2 99 67.7
Nn2g13000 Nelumbo nucifera HOM05D005240 ORTHO05D006471 1.6e-34 149.8 93 71.0
Gorai.012G093700 Gossypium raimondii HOM05D005240 ORTHO05D006471 2.1e-34 149.4 101 66.3
Ciclev10032844m.g Citrus clementina HOM05D005240 ORTHO05D006471 2.8e-34 149.1 104 63.5
RcHm_v2.0_Chr1g0364101 Rosa chinensis HOM05D005240 ORTHO05D006471 2.8e-34 149.1 101 66.3
Gohir.D04G083000 Gossypium hirsutum HOM05D005240 ORTHO05D006471 6.1e-34 147.9 101 66.3
QL08p056831 Quercus lobata HOM05D005240 ORTHO05D006471 6.1e-34 147.9 97 70.1
Thecc.10G068200 Theobroma cacao HOM05D005240 ORTHO05D006471 6.1e-34 147.9 94 67.0
FAN03G2612 Fragaria x ananassa HOM05D005240 ORTHO05D006471 8.0e-34 147.5 103 62.1
Gohir.A05G344500 Gossypium hirsutum HOM05D005240 ORTHO05D006471 8.0e-34 147.5 111 61.3
Lsat_1_v5_gn_2_115080 Lactuca sativa HOM05D005240 ORTHO05D006471 1.0e-33 147.1 93 71.0
PGR044G1235 Punica granatum HOM05D005240 ORTHO05D006471 1.0e-33 147.1 90 70.0
VMungo0720G3076 Vigna mungo HOM05D005240 ORTHO05D006471 1.0e-33 147.1 90 71.1
arahy.Tifrunner.gnm1.ann1.CT8M8A Arachis hypogaea HOM05D005240 ORTHO05D006471 1.4e-33 146.7 90 71.1
Thecc.10G068300 Theobroma cacao HOM05D005240 ORTHO05D006471 1.4e-33 146.7 100 65.0
Aqoxy4G03197 Aquilegia oxysepala HOM05D005240 ORTHO05D006471 1.8e-33 146.4 90 71.1
C04p64800 Brassica napus HOM05D005240 ORTHO05D006471 2.3e-33 146.0 102 65.7
BolC4t27957H Brassica oleracea HOM05D005240 ORTHO05D006471 2.3e-33 146.0 102 65.7
HanXRQChr07g0200441 Helianthus annuus HOM05D005240 ORTHO05D006471 2.3e-33 146.0 93 67.7
arahy.Tifrunner.gnm1.ann1.9PA5H9 Arachis hypogaea HOM05D005240 ORTHO05D006471 3.0e-33 145.6 89 70.8
FAN10G3611 Fragaria x ananassa HOM05D005240 ORTHO05D006471 3.0e-33 145.6 103 62.1
Glyma.10G213900 Glycine max HOM05D005240 ORTHO05D006471 3.0e-33 145.6 90 72.2
FvH4_7g20150 Fragaria vesca HOM05D005240 ORTHO05D006471 4.0e-33 145.2 89 69.7
FAN06G0525 Fragaria x ananassa HOM05D005240 ORTHO05D006471 4.0e-33 145.2 89 69.7
Actinidia38251 Actinidia chinensis HOM05D005240 ORTHO05D006471 8.9e-33 144.1 105 61.9
BcaC02g07666 Brassica carinata HOM05D005240 ORTHO05D006471 8.9e-33 144.1 102 64.7
Phvul.007G091800 Phaseolus vulgaris HOM05D005240 ORTHO05D006471 8.9e-33 144.1 90 71.1
GSVIVG01016337001 Vitis vinifera HOM05D005240 ORTHO05D006471 8.9e-33 144.1 102 64.7
Atru.chr12.634 Acer truncatum HOM05D005240 ORTHO05D006471 1.2e-32 143.7 96 67.7
ATR1159G086 Amborella trichopoda HOM05D005240 ORTHO05D006471 1.2e-32 143.7 92 68.5
A04p27280 Brassica napus HOM05D005240 ORTHO05D006471 1.2e-32 143.7 102 64.7
BraA04t18226Z Brassica rapa HOM05D005240 ORTHO05D006471 1.2e-32 143.7 102 64.7
Rhsim10G0162300 Rhododendron simsii HOM05D005240 ORTHO05D006471 1.2e-32 143.7 89 71.9
THA.LOC104803452 Tarenaya hassleriana HOM05D005240 ORTHO05D006471 1.2e-32 143.7 93 67.7
Eucgr.J01124 Eucalyptus grandis HOM05D005240 ORTHO05D006471 1.5e-32 143.3 90 70.0
BcaB06g28877 Brassica carinata HOM05D005240 ORTHO05D006471 3.4e-32 142.1 93 65.6
Psat6g186000 Pisum sativum HOM05D005240 ORTHO05D006471 3.4e-32 142.1 93 67.7
Lalb_Chr06g0162141 Lupinus albus HOM05D005240 ORTHO05D006471 4.4e-32 141.7 90 70.0
Sc14g0005480 Simmondsia chinensis HOM05D005240 ORTHO05D006471 7.5e-32 141.0 89 67.4
Ca_10594_v3 Cicer arietinum L. HOM05D005240 ORTHO05D006471 9.8e-32 140.6 98 62.2
Duzib128G0461 Durio zibethinus HOM05D005240 ORTHO05D006471 1.3e-31 140.2 94 66.0
Glyma.10G214000 Glycine max HOM05D005240 ORTHO05D006471 1.7e-31 139.8 90 70.0
COL.COLO4_23732 Corchorus olitorius HOM05D005240 ORTHO05D006471 2.2e-31 139.4 85 71.8
Lj5g0013716 Lotus japonicus HOM05D005240 ORTHO05D006471 2.2e-31 139.4 92 65.2
Thhalv10017274m.g Eutrema salsugineum HOM05D005240 ORTHO05D006471 2.9e-31 139.0 93 65.6
AUR62020787 Chenopodium quinoa HOM05D005240 ORTHO05D006471 3.7e-31 138.7 90 66.7
Sp4g18090 Schrenkiella parvula HOM05D005240 ORTHO05D006471 3.7e-31 138.7 93 64.5
arahy.Tifrunner.gnm1.ann1.D7L05R Arachis hypogaea HOM05D005240 ORTHO05D006471 4.9e-31 138.3 89 67.4
TWI38G0703 Tripterygium wilfordii HOM05D005240 ORTHO05D006471 4.9e-31 138.3 90 66.7
PSO170G1537 Papaver somniferum HOM05D005240 ORTHO05D006471 6.4e-31 137.9 98 61.2
CARHR130080 Cardamine hirsuta HOM05D005240 ORTHO05D006471 8.3e-31 137.5 93 64.5
PSO210G2142 Papaver somniferum HOM05D005240 ORTHO05D006471 1.4e-30 136.7 98 62.2
DCAR_015276 Daucus carota HOM05D005240 ORTHO05D006471 3.2e-30 135.6 97 61.9
MD07G1179100 Malus domestica HOM05D005240 ORTHO05D006471 4.1e-30 135.2 89 66.3
AL4G31940 Arabidopsis lyrata HOM05D005240 ORTHO05D006471 5.4e-30 134.8 101 60.4
AT2G35820 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 5.4e-30 134.8 105 58.1
AUR62043640 Chenopodium quinoa HOM05D005240 ORTHO05D006471 5.4e-30 134.8 90 65.6
ECA238G0657 Erigeron canadensis HOM05D005240 ORTHO05D006471 5.4e-30 134.8 92 64.1
Zm00001eb148920 Zea mays HOM05D005240 ORTHO05D006471 1.2e-29 133.7 90 67.8
ECA238G3142 Erigeron canadensis HOM05D005240 ORTHO05D006471 2.7e-29 132.5 92 64.1
Hund19334 Selenicereus undatus HOM05D005240 ORTHO05D006471 2.7e-29 132.5 90 64.4
Medtr1g095890 Medicago truncatula HOM05D005240 ORTHO05D006471 3.5e-29 132.1 91 64.8
Medtr1g095900 Medicago truncatula HOM05D005240 ORTHO05D006471 3.5e-29 132.1 91 63.7
Ah.16g108220 Amaranthus hybridus HOM05D005240 ORTHO05D006471 4.6e-29 131.7 90 62.2
BcaB06g28875 Brassica carinata HOM05D005240 ORTHO05D006471 4.6e-29 131.7 95 60.0
Carub.0004s1759 Capsella rubella HOM05D005240 ORTHO05D006471 7.8e-29 131.0 93 60.2
CANSAT56G3849 Cannabis sativa HOM05D005240 ORTHO05D006471 6.6e-28 127.9 92 62.0
Sc09g0006770 Simmondsia chinensis HOM05D005240 ORTHO05D006471 8.6e-28 127.5 98 59.2
CANSAT56G2007 Cannabis sativa HOM05D005240 ORTHO05D006471 1.9e-27 126.3 90 63.3
PSO210G2334 Papaver somniferum HOM05D005240 ORTHO05D006471 2.5e-27 125.9 94 58.5
HPP92_007585 Vanilla planifolia HOM05D005240 ORTHO05D006471 2.5e-27 125.9 89 62.9
AL4G31930 Arabidopsis lyrata HOM05D005240 ORTHO05D006471 3.3e-27 125.6 93 55.9
Potri.010G217500 Populus trichocarpa HOM05D005240 ORTHO05D006471 3.3e-27 125.6 87 65.5
DCAR_019135 Daucus carota HOM05D005240 ORTHO05D006471 5.6e-27 124.8 90 62.2
MBI16_g46203_MAGBIO Magnolia biondii HOM05D005240 ORTHO05D006471 5.6e-27 124.8 113 54.0
arahy.Tifrunner.gnm1.ann1.ZWA97R Arachis hypogaea HOM05D005240 ORTHO05D006471 7.3e-27 124.4 89 62.9
PSO210G3376 Papaver somniferum HOM05D005240 ORTHO05D006471 7.3e-27 124.4 91 59.3
AT2G35830 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 9.5e-27 124.0 93 58.1
AT2G35810 Arabidopsis thaliana HOM05D005240 ORTHO05D006471 4.7e-26 121.7 93 55.9
CDE07G1884 Ceratophyllum demersum HOM05D005240 ORTHO05D006471 4.7e-26 121.7 97 57.7
Sabra10G0168200 Salix brachista HOM05D005240 ORTHO05D006471 4.7e-26 121.7 101 57.4
MELO3C023691.2 Cucumis melo HOM05D005240 ORTHO05D006471 6.2e-26 121.3 103 54.4
vmacro17506 Vaccinium macrocarpon HOM05D005240 ORTHO05D006471 6.2e-26 121.3 97 60.8
Aa31LG7G14960 Aethionema arabicum HOM05D005240 ORTHO05D006471 1.4e-25 120.2 96 61.5
AagrBONN_evm.TU.Sc2ySwM_117.2297 Anthoceros agrestis HOM05D005240 ORTHO05D006471 1.4e-25 120.2 91 61.5
Os01g0833200 Oryza sativa ssp. japonica HOM05D005240 ORTHO05D006471 2.3e-25 119.4 90 61.1
Sed0009768 Sechium edule HOM05D005240 ORTHO05D006471 3.1e-25 119.0 87 62.1
CsaV3_7G024930 Cucumis sativus L. HOM05D005240 ORTHO05D006471 1.2e-24 117.1 90 58.9
Pp3c27_2400 Physcomitrium patens HOM05D005240 ORTHO05D006471 5.8e-24 114.8 93 54.8
Aa31LG7G14930 Aethionema arabicum HOM05D005240 ORTHO05D006471 2.2e-23 112.8 93 53.8
Mapoly0113s0026 Marchantia polymorpha HOM05D005240 ORTHO05D006471 2.2e-23 112.8 109 50.5
CAN.G492.51 Capsicum annuum HOM05D005240 ORTHO05D006471 3.7e-23 112.1 72 69.4
arahy.Tifrunner.gnm1.ann1.65Y6VJ Arachis hypogaea HOM05D005240 ORTHO05D006471 8.3e-23 110.9 89 58.4
Sed0007370 Sechium edule HOM05D005240 ORTHO05D006471 1.6e-21 106.7 89 51.7
SMO330G0030 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 3.9e-20 102.1 90 50.0
MCO11G764 Micromonas commoda HOM05D005240 ORTHO05D006471 2.5e-19 99.4 87 50.6
SMO330G0010 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 3.3e-19 99.0 88 50.0
Haze_16935 Corylus avellana HOM05D005240 ORTHO05D006471 4.3e-19 98.6 97 51.5
SMO147G0342 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 5.6e-19 98.2 88 48.9
CBR_g12600 Chara braunii HOM05D005240 ORTHO05D006471 7.3e-19 97.8 127 42.5
SMO147G0059 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 7.3e-19 97.8 90 47.8
SMO147G0062 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 1.6e-18 96.7 90 46.7
SMO330G0006 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 4.7e-18 95.1 101 43.6
SMO330G0038 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 4.0e-17 92.0 74 55.4
Dinv31345 Davidia involucrata HOM05D005240 ORTHO05D006471 8.9e-17 90.9 46 82.6
Oeu057235.1 Olea europaea HOM05D005240 ORTHO05D006471 5.4e-14 81.6 48 70.8
Cre08.g378650 Chlamydomonas reinhardtii HOM05D005240 ORTHO05D006471 2.1e-13 79.7 90 42.2
Lj8C95T7 Lonicera japonica HOM05D005240 ORTHO05D006471 1.0e-12 77.4 42 76.2
TPR.G10956 Trifolium pratense HOM05D005240 ORTHO05D006471 1.7e-12 76.6 42 73.8
SMO257G0002 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 2.3e-12 76.3 54 57.4
TPR.G15475 Trifolium pratense HOM05D005240 ORTHO05D006471 2.1e-10 69.7 42 66.7
SMO330G0050 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 4.7e-10 68.6 47 59.6
Lj8C95T8 Lonicera japonica HOM05D005240 ORTHO05D006471 4.0e-09 65.5 44 68.2
Cpa.g.sc53.24 Carica papaya HOM05D005240 ORTHO05D006471 8.9e-09 64.3 49 57.1
PRCOL_00006731 Prasinoderma coloniale HOM05D005240 ORTHO05D006471 8.9e-09 64.3 79 41.8
SMO330G0037 Selaginella moellendorffii HOM05D005240 ORTHO05D006471 2.6e-08 62.8 53 52.8
TPR.G970 Trifolium pratense HOM05D005240 ORTHO05D006471 5.8e-08 61.6 44 61.4
TPR.G38077 Trifolium pratense HOM05D005240 ORTHO05D006471 9.9e-08 60.8 44 59.1
Os01g0833150 Oryza sativa ssp. japonica HOM05D005240 ORTHO05D006471 6.4e-07 58.2 45 57.8


User provided reference genes

Program Settings