Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g185 Utricularia gibba HOM05D004486 ORTHO05D006329 5.4e-164 580.9 282 100.0
unitig_60.g25720 Utricularia gibba HOM05D004486 ORTHO05D006329 7.3e-68 261.5 326 50.3
CSS0008191 Camellia sinensis var. sinensis HOM05D004486 ORTHO05D006329 4.6e-62 242.3 355 42.5
CSS0049406 Camellia sinensis var. sinensis HOM05D004486 ORTHO05D006329 4.6e-62 242.3 355 42.5
SalBow3G3918 Salvia bowleyana HOM05D004486 ORTHO05D006329 2.3e-61 240.0 316 46.8
SGA_v2.0_scaffold71G24033 Striga asiatica HOM05D004486 ORTHO05D006329 1.5e-60 237.3 316 45.6
Dinv11819 Davidia involucrata HOM05D004486 ORTHO05D006329 1.9e-60 236.9 317 46.1
Migut.F01788 Erythranthe guttata HOM05D004486 ORTHO05D006329 3.6e-59 232.6 316 45.6
Oeu016149.1 Olea europaea HOM05D004486 ORTHO05D006329 8.1e-59 231.5 318 44.7
GSVIVG01032649001 Vitis vinifera HOM05D004486 ORTHO05D006329 1.1e-58 231.1 275 50.9
Hma1.2p1_2685F.1_g326910 Hydrangea macrophylla HOM05D004486 ORTHO05D006329 1.8e-58 230.3 316 44.3
Peaxi162Scf01024g00121 Petunia axillaris HOM05D004486 ORTHO05D006329 2.3e-58 229.9 317 44.8
MSTRG.8160 Avicennia marina HOM05D004486 ORTHO05D006329 3.1e-58 229.6 316 45.6
Rhsim12G0129400 Rhododendron simsii HOM05D004486 ORTHO05D006329 5.2e-58 228.8 316 44.9
Actinidia03014 Actinidia chinensis HOM05D004486 ORTHO05D006329 6.8e-58 228.4 316 44.3
MSTRG.361 Avicennia marina HOM05D004486 ORTHO05D006329 1.2e-57 227.6 316 44.6
CAN.G742.18 Capsicum annuum HOM05D004486 ORTHO05D006329 2.0e-57 226.9 317 44.8
Nitab4.5_0000561g0010 Nicotiana tabacum HOM05D004486 ORTHO05D006329 3.4e-57 226.1 317 44.2
Hund19290 Selenicereus undatus HOM05D004486 ORTHO05D006329 4.4e-57 225.7 316 44.9
TAR369G0956 Trochodendron aralioides HOM05D004486 ORTHO05D006329 4.4e-57 225.7 316 44.6
CSS0021534 Camellia sinensis var. sinensis HOM05D004486 ORTHO05D006329 7.5e-57 224.9 314 44.3
CANSAT11G2341 Cannabis sativa HOM05D004486 ORTHO05D006329 7.5e-57 224.9 316 44.9
Cc09_g02360 Coffea canephora HOM05D004486 ORTHO05D006329 7.5e-57 224.9 320 42.8
CiPaw.01G277900 Carya illinoinensis HOM05D004486 ORTHO05D006329 9.8e-57 224.6 317 44.5
EL10Ac2g03540 Beta vulgaris HOM05D004486 ORTHO05D006329 1.3e-56 224.2 316 44.9
Lj8A94T45 Lonicera japonica HOM05D004486 ORTHO05D006329 1.3e-56 224.2 360 42.2
HanXRQChr12g0367761 Helianthus annuus HOM05D004486 ORTHO05D006329 1.7e-56 223.8 355 39.7
Nitab4.5_0000830g0030 Nicotiana tabacum HOM05D004486 ORTHO05D006329 1.7e-56 223.8 317 43.8
PGR044G2316 Punica granatum HOM05D004486 ORTHO05D006329 6.4e-56 221.9 316 43.4
vmacro07094 Vaccinium macrocarpon HOM05D004486 ORTHO05D006329 8.3e-56 221.5 316 43.7
Eucgr.J01127 Eucalyptus grandis HOM05D004486 ORTHO05D006329 1.1e-55 221.1 316 44.3
MBI05_g24466_MAGBIO Magnolia biondii HOM05D004486 ORTHO05D006329 1.1e-55 221.1 316 44.3
Nn2g12957 Nelumbo nucifera HOM05D004486 ORTHO05D006329 1.1e-55 221.1 316 44.0
FAN06G4941 Fragaria x ananassa HOM05D004486 ORTHO05D006329 1.4e-55 220.7 320 43.1
Lsat_1_v5_gn_8_21161 Lactuca sativa HOM05D004486 ORTHO05D006329 1.9e-55 220.3 316 43.7
AUR62036016 Chenopodium quinoa HOM05D004486 ORTHO05D006329 2.4e-55 219.9 316 44.3
Nitab4.5_0000830g0050 Nicotiana tabacum HOM05D004486 ORTHO05D006329 2.4e-55 219.9 317 42.9
Haze_16953 Corylus avellana HOM05D004486 ORTHO05D006329 3.2e-55 219.5 313 44.1
Sabra08G0032200 Salix brachista HOM05D004486 ORTHO05D006329 3.2e-55 219.5 313 44.7
Ah.10g033110 Amaranthus hybridus HOM05D004486 ORTHO05D006329 4.1e-55 219.2 316 43.7
Manes.18G141033 Manihot esculenta HOM05D004486 ORTHO05D006329 4.1e-55 219.2 313 43.5
PGSC0003DMG400028998 Solanum tuberosum HOM05D004486 ORTHO05D006329 4.1e-55 219.2 318 42.5
AUR62027896 Chenopodium quinoa HOM05D004486 ORTHO05D006329 5.4e-55 218.8 316 44.0
ECA233G4916 Erigeron canadensis HOM05D004486 ORTHO05D006329 5.4e-55 218.8 354 41.0
Atru.chr12.611 Acer truncatum HOM05D004486 ORTHO05D006329 7.1e-55 218.4 318 43.7
DCAR_006479 Daucus carota HOM05D004486 ORTHO05D006329 9.2e-55 218.0 316 43.0
RcHm_v2.0_Chr1g0364401 Rosa chinensis HOM05D004486 ORTHO05D006329 9.2e-55 218.0 320 43.1
Cfa001575 Carpinus fangiana HOM05D004486 ORTHO05D006329 2.7e-54 216.5 313 43.8
FvH4_7g20511 Fragaria vesca HOM05D004486 ORTHO05D006329 3.5e-54 216.1 320 42.5
FAN01G2088 Fragaria x ananassa HOM05D004486 ORTHO05D006329 3.5e-54 216.1 313 43.1
Glyma.20G244100 Glycine max HOM05D004486 ORTHO05D006329 3.5e-54 216.1 315 42.5
Prupe.2G220700 Prunus persica HOM05D004486 ORTHO05D006329 4.6e-54 215.7 318 42.8
Manes.18G141037 Manihot esculenta HOM05D004486 ORTHO05D006329 6.0e-54 215.3 313 42.5
Sabra10G0166800 Salix brachista HOM05D004486 ORTHO05D006329 6.0e-54 215.3 314 43.6
Solyc04g049720.4 Solanum lycopersicum HOM05D004486 ORTHO05D006329 6.0e-54 215.3 318 42.1
Phvul.007G005900 Phaseolus vulgaris HOM05D004486 ORTHO05D006329 7.8e-54 214.9 329 43.2
FAN10G3892 Fragaria x ananassa HOM05D004486 ORTHO05D006329 1.0e-53 214.5 322 42.2
Gohir.D13G021700 Gossypium hirsutum HOM05D004486 ORTHO05D006329 1.0e-53 214.5 318 43.7
Gorai.013G024500 Gossypium raimondii HOM05D004486 ORTHO05D006329 1.0e-53 214.5 318 43.7
Gohir.A13G021200 Gossypium hirsutum HOM05D004486 ORTHO05D006329 1.3e-53 214.2 318 43.7
Peaxi162Scf01024g00123 Petunia axillaris HOM05D004486 ORTHO05D006329 1.3e-53 214.2 317 42.0
Sopen04g019990 Solanum pennellii HOM05D004486 ORTHO05D006329 1.3e-53 214.2 318 42.1
FAN06G4255 Fragaria x ananassa HOM05D004486 ORTHO05D006329 1.7e-53 213.8 316 43.0
PSO384G2310 Papaver somniferum HOM05D004486 ORTHO05D006329 1.7e-53 213.8 320 42.8
QL08p057259 Quercus lobata HOM05D004486 ORTHO05D006329 1.7e-53 213.8 308 44.2
Potri.008G045900 Populus trichocarpa HOM05D004486 ORTHO05D006329 2.3e-53 213.4 313 44.4
Lj7A436T61 Lonicera japonica HOM05D004486 ORTHO05D006329 3.0e-53 213.0 318 44.7
MD01G1114100 Malus domestica HOM05D004486 ORTHO05D006329 3.9e-53 212.6 314 43.0
PSO339G6713 Papaver somniferum HOM05D004486 ORTHO05D006329 5.1e-53 212.2 320 42.5
Thecc.10G065100 Theobroma cacao HOM05D004486 ORTHO05D006329 5.1e-53 212.2 318 43.1
Lalb_Chr21g0307511 Lupinus albus HOM05D004486 ORTHO05D006329 6.6e-53 211.8 310 43.9
Lj5g0008233 Lotus japonicus HOM05D004486 ORTHO05D006329 8.6e-53 211.5 333 42.3
MD01G1113900 Malus domestica HOM05D004486 ORTHO05D006329 1.9e-52 210.3 292 43.5
THA.LOC104827314 Tarenaya hassleriana HOM05D004486 ORTHO05D006329 7.3e-52 208.4 321 41.7
Duzib106G0308 Durio zibethinus HOM05D004486 ORTHO05D006329 9.5e-52 208.0 314 42.7
Potri.010G215700 Populus trichocarpa HOM05D004486 ORTHO05D006329 9.5e-52 208.0 313 43.8
MD07G1182000 Malus domestica HOM05D004486 ORTHO05D006329 1.6e-51 207.2 318 41.5
VMungo0720G3071 Vigna mungo HOM05D004486 ORTHO05D006329 4.7e-51 205.7 310 43.9
Ciclev10030974m.g Citrus clementina HOM05D004486 ORTHO05D006329 6.2e-51 205.3 314 42.0
Manes.18G142200 Manihot esculenta HOM05D004486 ORTHO05D006329 6.2e-51 205.3 313 41.5
Ca_11379_v3 Cicer arietinum L. HOM05D004486 ORTHO05D006329 8.1e-51 204.9 339 41.6
AL6G24140 Arabidopsis lyrata HOM05D004486 ORTHO05D006329 1.4e-50 204.1 320 42.2
TWI38G2347 Tripterygium wilfordii HOM05D004486 ORTHO05D006329 1.4e-50 204.1 318 42.1
CDE04G1784 Ceratophyllum demersum HOM05D004486 ORTHO05D006329 1.8e-50 203.8 320 41.6
Aqoxy4G03158 Aquilegia oxysepala HOM05D004486 ORTHO05D006329 3.1e-50 203.0 320 40.0
BcaNung01890 Brassica carinata HOM05D004486 ORTHO05D006329 6.8e-50 201.8 316 42.4
HPP92_026987 Vanilla planifolia HOM05D004486 ORTHO05D006329 8.9e-50 201.4 320 40.6
Sed0016157 Sechium edule HOM05D004486 ORTHO05D006329 1.5e-49 200.7 307 43.0
CARHR199920 Cardamine hirsuta HOM05D004486 ORTHO05D006329 2.0e-49 200.3 320 42.2
HPP92_015409 Vanilla planifolia HOM05D004486 ORTHO05D006329 2.6e-49 199.9 320 40.3
Aa31sc127G20 Aethionema arabicum HOM05D004486 ORTHO05D006329 4.4e-49 199.1 322 40.1
Medtr1g116230 Medicago truncatula HOM05D004486 ORTHO05D006329 4.4e-49 199.1 327 41.9
TPR.G10423 Trifolium pratense HOM05D004486 ORTHO05D006329 4.4e-49 199.1 331 41.4
arahy.Tifrunner.gnm1.ann1.Q6727A Arachis hypogaea HOM05D004486 ORTHO05D006329 5.8e-49 198.7 310 43.2
arahy.Tifrunner.gnm1.ann1.GKFC1I Arachis hypogaea HOM05D004486 ORTHO05D006329 7.6e-49 198.4 310 43.2
AT5G13520 Arabidopsis thaliana HOM05D004486 ORTHO05D006329 9.9e-49 198.0 320 41.2
Os03g0819100 Oryza sativa ssp. japonica HOM05D004486 ORTHO05D006329 9.9e-49 198.0 320 39.7
Psat6g239960 Pisum sativum HOM05D004486 ORTHO05D006329 9.9e-49 198.0 339 39.5
Zm00001eb062480 Zea mays HOM05D004486 ORTHO05D006329 9.9e-49 198.0 326 39.3
Carub.0006s1168 Capsella rubella HOM05D004486 ORTHO05D006329 1.7e-48 197.2 320 41.2
A02p02010 Brassica napus HOM05D004486 ORTHO05D006329 2.2e-48 196.8 311 41.8
A10p24750 Brassica napus HOM05D004486 ORTHO05D006329 2.9e-48 196.4 311 41.8
VMungo0720G1168 Vigna mungo HOM05D004486 ORTHO05D006329 2.9e-48 196.4 308 43.5
Sp6g30500 Schrenkiella parvula HOM05D004486 ORTHO05D006329 4.9e-48 195.7 320 40.9
BcaNung01146 Brassica carinata HOM05D004486 ORTHO05D006329 6.4e-48 195.3 311 41.8
BraA02t05173Z Brassica rapa HOM05D004486 ORTHO05D006329 6.4e-48 195.3 311 41.8
TWI38G1612 Tripterygium wilfordii HOM05D004486 ORTHO05D006329 6.4e-48 195.3 318 41.5
C09p63580 Brassica napus HOM05D004486 ORTHO05D006329 1.1e-47 194.5 311 41.5
BolC9t59201H Brassica oleracea HOM05D004486 ORTHO05D006329 3.2e-47 193.0 311 41.5
BcaC04g19110 Brassica carinata HOM05D004486 ORTHO05D006329 7.1e-47 191.8 311 41.2
BraA10t44538Z Brassica rapa HOM05D004486 ORTHO05D006329 9.2e-47 191.4 311 40.8
Eucgr.J01128 Eucalyptus grandis HOM05D004486 ORTHO05D006329 3.5e-46 189.5 303 41.3
Thhalv10012982m.g Eutrema salsugineum HOM05D004486 ORTHO05D006329 3.5e-46 189.5 320 40.0
MELO3C025494.2 Cucumis melo HOM05D004486 ORTHO05D006329 1.9e-44 183.7 313 39.0
CsaV3_5G026050 Cucumis sativus L. HOM05D004486 ORTHO05D006329 4.3e-44 182.6 313 37.7
SEGI_01278 Sequoiadendron giganteum HOM05D004486 ORTHO05D006329 6.4e-40 168.7 324 36.1
SEGI_27690 Sequoiadendron giganteum HOM05D004486 ORTHO05D006329 7.1e-39 165.2 318 36.2
ECA233G5280 Erigeron canadensis HOM05D004486 ORTHO05D006329 2.7e-38 163.3 179 50.8
Cpa.g.sc1.280 Carica papaya HOM05D004486 ORTHO05D006329 2.5e-36 156.8 172 49.4
AL6G23300 Arabidopsis lyrata HOM05D004486 ORTHO05D006329 2.8e-35 153.3 218 44.0
AL6G23330 Arabidopsis lyrata HOM05D004486 ORTHO05D006329 2.8e-35 153.3 218 44.0
Nitab4.5_0005262g0010 Nicotiana tabacum HOM05D004486 ORTHO05D006329 3.6e-35 152.9 260 39.6
C02p06220 Brassica napus HOM05D004486 ORTHO05D006329 8.1e-35 151.8 212 43.4
ClCG09G020360 Citrullus lanatus HOM05D004486 ORTHO05D006329 1.4e-34 151.0 306 35.9
Mapoly0007s0135 Marchantia polymorpha HOM05D004486 ORTHO05D006329 1.2e-33 147.9 301 35.5
AagrBONN_evm.TU.Sc2ySwM_362.2493 Anthoceros agrestis HOM05D004486 ORTHO05D006329 2.6e-33 146.7 304 35.2
Zm00001eb258690 Zea mays HOM05D004486 ORTHO05D006329 1.3e-32 144.4 182 44.5
BolC2t06563H Brassica oleracea HOM05D004486 ORTHO05D006329 2.4e-31 140.2 171 46.2
Zm00001eb160290 Zea mays HOM05D004486 ORTHO05D006329 1.3e-29 134.4 155 47.7
SMO356G0749 Selaginella moellendorffii HOM05D004486 ORTHO05D006329 3.9e-29 132.9 303 33.3
Zm00001eb246100 Zea mays HOM05D004486 ORTHO05D006329 3.9e-29 132.9 155 47.1
Duzib128G1554 Durio zibethinus HOM05D004486 ORTHO05D006329 1.4e-26 124.4 199 41.7
Actinidia38236 Actinidia chinensis HOM05D004486 ORTHO05D006329 1.5e-25 120.9 149 45.6
CBR_g45218 Chara braunii HOM05D004486 ORTHO05D006329 2.0e-25 120.6 296 33.1
Zm00001eb103910 Zea mays HOM05D004486 ORTHO05D006329 3.0e-21 106.7 141 44.0
CDE07G0672 Ceratophyllum demersum HOM05D004486 ORTHO05D006329 3.0e-13 80.1 103 43.7
MELO3C027138.2 Cucumis melo HOM05D004486 ORTHO05D006329 5.0e-08 62.8 121 38.0
ATR0594G057 Amborella trichopoda HOM05D004486 ORTHO05D006329 8.4e-08 62.0 122 36.9
CAN.G1534.3 Capsicum annuum HOM05D004486 ORTHO05D031952 1.9e-07 60.8 43 60.5
Haze_22492 Corylus avellana HOM05D000583 ORTHO05D000442 2.1e-06 57.4 43 58.1
Nn8g39313 Nelumbo nucifera HOM05D004486 ORTHO05D006329 4.6e-06 56.2 70 45.7


User provided reference genes

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