Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g183 Utricularia gibba HOM05D003200 ORTHO05D003574 2.5e-86 322.0 157 100.0
unitig_60.g25721 Utricularia gibba HOM05D003200 ORTHO05D003574 4.8e-61 238.0 155 75.5
unitig_26.g10121 Utricularia gibba HOM05D003200 ORTHO05D003574 3.5e-35 152.1 161 56.5
MSTRG.18395 Avicennia marina HOM05D003200 ORTHO05D003574 5.9e-35 151.4 169 53.8
MSTRG.17558 Avicennia marina HOM05D003200 ORTHO05D003574 3.2e-33 145.6 155 54.2
SGA_v2.0_scaffold1G00760 Striga asiatica HOM05D003200 ORTHO05D003574 1.4e-31 140.2 170 51.2
SGA_v2.0_scaffold8G04634 Striga asiatica HOM05D003200 ORTHO05D003574 5.2e-31 138.3 171 49.1
Oeu058542.1 Olea europaea HOM05D003200 ORTHO05D003574 4.5e-27 125.2 160 48.1
SalBow2G0964 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.3e-26 123.6 159 48.4
SalBow2G1492 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.3e-26 123.6 162 49.4
SalBow7G0874 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.3e-26 123.6 159 49.7
SalBow7G4053 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.3e-26 123.6 159 49.7
SalBow2G2949 Salvia bowleyana HOM05D003200 ORTHO05D003574 1.7e-26 123.2 162 49.4
Migut.D00540 Erythranthe guttata HOM05D003200 ORTHO05D003574 4.2e-25 118.6 168 45.8
Actinidia06303 Actinidia chinensis HOM05D003200 ORTHO05D003574 2.2e-21 106.3 151 47.7
Oeu043308.3 Olea europaea HOM05D003200 ORTHO05D003574 2.2e-21 106.3 167 44.3
HanXRQChr11g0345461 Helianthus annuus HOM05D003200 ORTHO05D003574 1.4e-20 103.6 158 44.9
Lsat_1_v5_gn_6_49141 Lactuca sativa HOM05D003200 ORTHO05D003574 7.7e-19 97.8 163 42.3
Hma1.2p1_0505F.1_g168170 Hydrangea macrophylla HOM05D003200 ORTHO05D003574 6.5e-18 94.7 158 41.1
MBI06_g07796_MAGBIO Magnolia biondii HOM05D003200 ORTHO05D003574 8.6e-18 94.4 158 41.1
TAR633G1334 Trochodendron aralioides HOM05D003200 ORTHO05D003574 1.1e-17 94.0 148 44.6
Dinv36326 Davidia involucrata HOM05D003200 ORTHO05D003574 1.9e-17 93.2 155 45.2
Phvul.007G005200 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 1.9e-17 93.2 128 46.1
Cc01_g03340 Coffea canephora HOM05D003200 ORTHO05D003574 3.3e-17 92.4 165 38.8
VMungo0720G1305 Vigna mungo HOM05D003200 ORTHO05D003574 3.3e-17 92.4 128 46.9
Dinv43495 Davidia involucrata HOM05D003200 ORTHO05D003574 4.2e-17 92.0 156 39.7
Glyma.20G244700 Glycine max HOM05D003200 ORTHO05D003574 1.2e-16 90.5 128 46.1
Rhsim01G0186500 Rhododendron simsii HOM05D003200 ORTHO05D003574 2.1e-16 89.7 155 40.0
Ca_11388_v3 Cicer arietinum L. HOM05D003200 ORTHO05D003574 2.8e-16 89.4 134 45.5
TWI60G0814 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 8.0e-16 87.8 125 45.6
Glyma.10G294900 Glycine max HOM05D003200 ORTHO05D003574 1.0e-15 87.4 128 44.5
TWI32G0311 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 1.0e-15 87.4 134 43.3
Lsat_1_v5_gn_1_68481 Lactuca sativa HOM05D003200 ORTHO05D003574 1.4e-15 87.0 156 41.0
Prupe.6G014100 Prunus persica HOM05D003200 ORTHO05D003574 1.4e-15 87.0 120 49.2
Peaxi162Scf00780g00043 Petunia axillaris HOM05D003200 ORTHO05D003574 1.8e-15 86.7 157 39.5
Psat6g241840 Pisum sativum HOM05D003200 ORTHO05D003574 2.3e-15 86.3 156 39.1
AL6G31430 Arabidopsis lyrata HOM05D003200 ORTHO05D003574 3.0e-15 85.9 122 48.4
Lalb_Chr21g0307561 Lupinus albus HOM05D003200 ORTHO05D003574 3.0e-15 85.9 136 44.1
RcHm_v2.0_Chr5g0080701 Rosa chinensis HOM05D003200 ORTHO05D003574 3.0e-15 85.9 130 45.4
GSVIVG01001362001 Vitis vinifera HOM05D003200 ORTHO05D003574 3.0e-15 85.9 152 42.1
Thhalv10013350m.g Eutrema salsugineum HOM05D003200 ORTHO05D003574 4.0e-15 85.5 131 45.8
Nitab4.5_0005041g0060 Nicotiana tabacum HOM05D003200 ORTHO05D003574 5.2e-15 85.1 124 44.4
HPP92_005025 Vanilla planifolia HOM05D003200 ORTHO05D003574 8.9e-15 84.3 158 39.2
CDE04G0125 Ceratophyllum demersum HOM05D003200 ORTHO05D003574 1.2e-14 84.0 163 38.7
Medtr1g116330 Medicago truncatula HOM05D003200 ORTHO05D003574 1.2e-14 84.0 118 44.9
BcaB08g36558 Brassica carinata HOM05D003200 ORTHO05D003574 1.5e-14 83.6 130 45.4
CSS0033476 Camellia sinensis var. sinensis HOM05D003200 ORTHO05D003574 1.5e-14 83.6 159 35.8
Actinidia06863 Actinidia chinensis HOM05D003200 ORTHO05D003574 2.0e-14 83.2 154 42.2
AT5G19900 Arabidopsis thaliana HOM05D003200 ORTHO05D003574 2.0e-14 83.2 126 46.0
Carub.0006s1827 Capsella rubella HOM05D003200 ORTHO05D003574 2.0e-14 83.2 132 43.9
Hund21653 Selenicereus undatus HOM05D003200 ORTHO05D003574 2.0e-14 83.2 161 39.1
HPP92_008488 Vanilla planifolia HOM05D003200 ORTHO05D003574 2.0e-14 83.2 163 37.4
Lj5g0003842 Lotus japonicus HOM05D003200 ORTHO05D003574 2.6e-14 82.8 154 37.7
Nitab4.5_0003436g0110 Nicotiana tabacum HOM05D003200 ORTHO05D003574 2.6e-14 82.8 127 44.1
PGR102G1285 Punica granatum HOM05D003200 ORTHO05D003574 2.6e-14 82.8 124 44.4
CARHR192960 Cardamine hirsuta HOM05D003200 ORTHO05D003574 3.4e-14 82.4 126 47.6
Eucgr.B02607 Eucalyptus grandis HOM05D003200 ORTHO05D003574 3.4e-14 82.4 123 45.5
QL01p009941 Quercus lobata HOM05D003200 ORTHO05D003574 3.4e-14 82.4 123 46.3
TPR.G10419 Trifolium pratense HOM05D003200 ORTHO05D003574 4.4e-14 82.0 140 44.3
Aa31LG1G13220 Aethionema arabicum HOM05D003200 ORTHO05D003574 5.7e-14 81.6 125 44.8
ECA248G1666 Erigeron canadensis HOM05D003200 ORTHO05D003574 5.7e-14 81.6 151 38.4
Lalb_Chr06g0164391 Lupinus albus HOM05D003200 ORTHO05D003574 7.5e-14 81.3 128 44.5
Sp6g24480 Schrenkiella parvula HOM05D003200 ORTHO05D003574 7.5e-14 81.3 126 43.7
TWI34G0579 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 7.5e-14 81.3 125 42.4
MD03G1014800 Malus domestica HOM05D003200 ORTHO05D003574 9.8e-14 80.9 149 41.6
CDE02G1896 Ceratophyllum demersum HOM05D003200 ORTHO05D003574 1.7e-13 80.1 159 37.1
TAR636G3550 Trochodendron aralioides HOM05D003200 ORTHO05D003574 1.7e-13 80.1 149 40.9
Sopen01g010160 Solanum pennellii HOM05D003200 ORTHO05D003574 2.2e-13 79.7 162 39.5
Dinv43936 Davidia involucrata HOM05D003200 ORTHO05D003574 2.8e-13 79.3 119 43.7
Sed0003084 Sechium edule HOM05D003200 ORTHO05D003574 2.8e-13 79.3 135 44.4
Cfa009640 Carpinus fangiana HOM05D003200 ORTHO05D003574 4.9e-13 78.6 132 41.7
Lalb_Chr02g0144231 Lupinus albus HOM05D003200 ORTHO05D003574 4.9e-13 78.6 128 43.8
MD11G1016000 Malus domestica HOM05D003200 ORTHO05D003574 4.9e-13 78.6 139 41.7
PGSC0003DMG400024057 Solanum tuberosum HOM05D003200 ORTHO05D003574 4.9e-13 78.6 162 38.9
EL10Ac4g10333 Beta vulgaris HOM05D003200 ORTHO05D003574 6.3e-13 78.2 166 38.6
ClCG02G023720 Citrullus lanatus HOM05D003200 ORTHO05D003574 6.3e-13 78.2 119 44.5
Sc16g0011990 Simmondsia chinensis HOM05D003200 ORTHO05D003574 6.3e-13 78.2 163 35.6
Ciclev10015088m.g Citrus clementina HOM05D003200 ORTHO05D003574 8.3e-13 77.8 119 45.4
MELO3C014647.2 Cucumis melo HOM05D003200 ORTHO05D003574 1.1e-12 77.4 119 44.5
Gohir.A08G078400 Gossypium hirsutum HOM05D003200 ORTHO05D003574 1.1e-12 77.4 123 42.3
Thecc.09G216900 Theobroma cacao HOM05D003200 ORTHO05D003574 1.1e-12 77.4 121 43.8
CsaV3_4G023710 Cucumis sativus L. HOM05D003200 ORTHO05D003574 1.8e-12 76.6 119 44.5
Rhsim13G0227400 Rhododendron simsii HOM05D003200 ORTHO05D003574 1.8e-12 76.6 69 56.5
BcaB01g04823 Brassica carinata HOM05D003200 ORTHO05D003574 2.4e-12 76.3 69 58.0
C03p11280 Brassica napus HOM05D003200 ORTHO05D003574 2.4e-12 76.3 69 58.0
BolC3t13598H Brassica oleracea HOM05D003200 ORTHO05D003574 2.4e-12 76.3 69 58.0
BraA03t10286Z Brassica rapa HOM05D003200 ORTHO05D003574 2.4e-12 76.3 69 58.0
CiPaw.13G170600 Carya illinoinensis HOM05D003200 ORTHO05D003574 2.4e-12 76.3 129 42.6
CsaV3_4G023690 Cucumis sativus L. HOM05D003200 ORTHO05D003574 2.4e-12 76.3 119 44.5
Gohir.D08G088300 Gossypium hirsutum HOM05D003200 ORTHO05D003574 2.4e-12 76.3 120 42.5
PGR119G1170 Punica granatum HOM05D003200 ORTHO05D003574 2.4e-12 76.3 142 39.4
Gohir.D05G069100 Gossypium hirsutum HOM05D003200 ORTHO05D003574 3.1e-12 75.9 119 44.5
MELO3C014649.2 Cucumis melo HOM05D003200 ORTHO05D003574 4.1e-12 75.5 119 44.5
Gohir.A05G066600 Gossypium hirsutum HOM05D003200 ORTHO05D003574 4.1e-12 75.5 119 44.5
Manes.03G089900 Manihot esculenta HOM05D003200 ORTHO05D003574 4.1e-12 75.5 126 42.1
TAR623G0555 Trochodendron aralioides HOM05D003200 ORTHO05D003574 4.1e-12 75.5 154 36.4
Cpa.g.c36927 Carica papaya HOM05D003200 ORTHO05D003574 5.4e-12 75.1 121 42.1
Cpa.g.c43902 Carica papaya HOM05D003200 ORTHO05D003574 5.4e-12 75.1 121 42.1
THA.LOC104811052 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 5.4e-12 75.1 144 38.2
Duzib150G1584 Durio zibethinus HOM05D003200 ORTHO05D003574 7.0e-12 74.7 135 40.0
Gorai.004G092700 Gossypium raimondii HOM05D003200 ORTHO05D003574 7.0e-12 74.7 120 41.7
Lj2P674T26 Lonicera japonica HOM05D003200 ORTHO05D003574 7.0e-12 74.7 69 56.5
TAR369G0274 Trochodendron aralioides HOM05D003200 ORTHO05D003574 7.0e-12 74.7 157 39.5
BcaC04g19396 Brassica carinata HOM05D003200 ORTHO05D003574 9.2e-12 74.3 116 43.1
Manes.15G103800 Manihot esculenta HOM05D003200 ORTHO05D003574 9.2e-12 74.3 128 42.2
A10p19820 Brassica napus HOM05D003200 ORTHO05D003574 1.2e-11 73.9 69 58.0
C09p56140 Brassica napus HOM05D003200 ORTHO05D003574 1.2e-11 73.9 69 58.0
BolC9t58481H Brassica oleracea HOM05D003200 ORTHO05D003574 1.2e-11 73.9 69 58.0
BraA10t44058Z Brassica rapa HOM05D003200 ORTHO05D003574 1.2e-11 73.9 69 58.0
CiPaw.14G129600 Carya illinoinensis HOM05D003200 ORTHO05D003574 1.2e-11 73.9 158 38.6
Gorai.009G070100 Gossypium raimondii HOM05D003200 ORTHO05D003574 1.2e-11 73.9 119 43.7
Lj1P478T20 Lonicera japonica HOM05D003200 ORTHO05D003574 1.2e-11 73.9 119 41.2
BcaB01g04847 Brassica carinata HOM05D003200 ORTHO05D003574 2.0e-11 73.2 69 58.0
A03p09700 Brassica napus HOM05D003200 ORTHO05D003574 2.0e-11 73.2 69 58.0
GSVIVG01025369001 Vitis vinifera HOM05D003200 ORTHO05D003574 2.7e-11 72.8 163 36.8
Aqoxy1G00122 Aquilegia oxysepala HOM05D003200 ORTHO05D003574 1.3e-10 70.5 156 35.3
FAN25G2592 Fragaria x ananassa HOM05D003200 ORTHO05D003574 1.3e-10 70.5 158 38.6
Sc09g0000340 Simmondsia chinensis HOM05D003200 ORTHO05D003574 1.3e-10 70.5 157 36.9
Ah.06g193140 Amaranthus hybridus HOM05D003200 ORTHO05D003574 1.7e-10 70.1 163 36.2
Duzib170G0875 Durio zibethinus HOM05D003200 ORTHO05D003574 2.3e-10 69.7 120 40.0
COL.COLO4_10428 Corchorus olitorius HOM05D003200 ORTHO05D003574 2.9e-10 69.3 118 42.4
FAN16G1057 Fragaria x ananassa HOM05D003200 ORTHO05D003574 2.9e-10 69.3 158 38.6
ATR0807G127 Amborella trichopoda HOM05D003200 ORTHO05D003574 5.0e-10 68.6 119 42.9
Sabra01G0008800 Salix brachista HOM05D003200 ORTHO05D003574 5.0e-10 68.6 80 51.2
FvH4_3g44330 Fragaria vesca HOM05D003200 ORTHO05D003574 8.6e-10 67.8 159 39.6
FAN11G2071 Fragaria x ananassa HOM05D003200 ORTHO05D003574 8.6e-10 67.8 129 42.6
FAN21G1034 Fragaria x ananassa HOM05D003200 ORTHO05D003574 8.6e-10 67.8 159 39.6
Potri.001G011800 Populus trichocarpa HOM05D003200 ORTHO05D003574 8.6e-10 67.8 87 49.4
A02p05900 Brassica napus HOM05D003200 ORTHO05D003574 1.1e-09 67.4 69 53.6
BraA02t05542Z Brassica rapa HOM05D003200 ORTHO05D003574 1.1e-09 67.4 69 53.6
Sabra03G0160000 Salix brachista HOM05D003200 ORTHO05D003574 2.5e-09 66.2 70 52.9
BNapus_Darmor_BZH_scaffold_38p01970 Brassica napus HOM05D003200 ORTHO05D003574 3.3e-09 65.9 69 53.6
AUR62019213 Chenopodium quinoa HOM05D003200 ORTHO05D003574 4.3e-09 65.5 116 42.2
SEGI_19228 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 4.3e-09 65.5 69 49.3
BolC2t06994H Brassica oleracea HOM05D003200 ORTHO05D003574 5.6e-09 65.1 68 52.9
PSO339G4963 Papaver somniferum HOM05D003200 ORTHO05D003574 5.6e-09 65.1 160 36.9
THA.LOC104799746 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 5.6e-09 65.1 124 37.9
Atru.chr3.2127 Acer truncatum HOM05D003200 ORTHO05D003574 2.1e-08 63.2 147 36.7
Atru.chr3.2140 Acer truncatum HOM05D003200 ORTHO05D003574 2.1e-08 63.2 146 35.6
AUR62000043 Chenopodium quinoa HOM05D003200 ORTHO05D003574 2.1e-08 63.2 118 43.2
ClCG09G003790 Citrullus lanatus HOM05D003200 ORTHO05D003574 2.1e-08 63.2 71 47.9
Sed0009987 Sechium edule HOM05D003200 ORTHO05D003574 3.6e-08 62.4 76 46.1
MELO3C023513.2 Cucumis melo HOM05D003200 ORTHO05D003574 1.8e-07 60.1 71 46.5
CsaV3_7G031440 Cucumis sativus L. HOM05D003200 ORTHO05D003574 3.0e-07 59.3 70 45.7
ECA233G5951 Erigeron canadensis HOM05D003200 ORTHO05D003574 3.0e-07 59.3 105 39.0


User provided reference genes

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