Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1766 Utricularia gibba HOM05D000607 ORTHO05D000518 1.0e-79 300.1 157 100.0
SEGI_21087 Sequoiadendron giganteum HOM05D000607 ORTHO05D000518 4.7e-08 62.0 70 34.3
Nitab4.5_0007116g0010 Nicotiana tabacum HOM05D000607 ORTHO05D000518 2.3e-07 59.7 63 41.3
Solyc03g007870.3 Solanum lycopersicum HOM05D000607 ORTHO05D000518 4.0e-07 58.9 63 39.7
Sopen03g003810 Solanum pennellii HOM05D000607 ORTHO05D000518 4.0e-07 58.9 63 39.7
PGSC0003DMG400009507 Solanum tuberosum HOM05D000607 ORTHO05D000518 4.0e-07 58.9 63 39.7
PGSC0003DMG400031424 Solanum tuberosum HOM05D000607 ORTHO05D000518 4.0e-07 58.9 63 39.7
MSTRG.27080 Avicennia marina HOM05D000607 ORTHO05D000518 5.2e-07 58.5 69 36.2
MSTRG.8706 Avicennia marina HOM05D000607 ORTHO05D000518 6.8e-07 58.2 62 38.7
CAN.G126.32 Capsicum annuum HOM05D000607 ORTHO05D000518 6.8e-07 58.2 90 33.3
Migut.E01208 Erythranthe guttata HOM05D000607 ORTHO05D000518 6.8e-07 58.2 94 34.0
Migut.F00284 Erythranthe guttata HOM05D000607 ORTHO05D000518 6.8e-07 58.2 63 41.3
Nitab4.5_0006014g0030 Nicotiana tabacum HOM05D000607 ORTHO05D000518 6.8e-07 58.2 63 39.7
Peaxi162Scf00618g00615 Petunia axillaris HOM05D000607 ORTHO05D000518 6.8e-07 58.2 63 42.9
Migut.E01209 Erythranthe guttata HOM05D000607 ORTHO05D000518 8.9e-07 57.8 90 34.4
SEGI_10829 Sequoiadendron giganteum HOM05D000607 ORTHO05D000518 8.9e-07 57.8 67 34.3
SEGI_25445 Sequoiadendron giganteum HOM05D000607 ORTHO05D000518 8.9e-07 57.8 67 34.3
arahy.Tifrunner.gnm1.ann1.AC20WW Arachis hypogaea HOM05D000607 ORTHO05D000518 1.2e-06 57.4 99 32.3
CsaV3_5G001030 Cucumis sativus L. HOM05D000607 ORTHO05D000518 1.2e-06 57.4 62 37.1
Manes.14G021900 Manihot esculenta HOM05D000607 ORTHO05D000518 1.5e-06 57.0 63 39.7
Peaxi162Scf00444g00231 Petunia axillaris HOM05D000607 ORTHO05D000518 1.5e-06 57.0 63 36.5
Dinv35259 Davidia involucrata HOM05D000607 ORTHO05D000518 2.6e-06 56.2 63 34.9
HanXRQChr12g0381131 Helianthus annuus HOM05D000607 ORTHO05D000518 2.6e-06 56.2 64 35.9
Lj5A278G73 Lonicera japonica HOM05D000101 ORTHO05D002559 2.6e-06 56.2 70 35.7
Lj5g0023591 Lotus japonicus HOM05D000607 ORTHO05D000518 2.6e-06 56.2 67 34.3
Lalb_Chr06g0161361 Lupinus albus HOM05D000607 ORTHO05D000518 2.6e-06 56.2 94 29.8
Medtr6g049320 Medicago truncatula HOM05D000607 ORTHO05D000518 2.6e-06 56.2 92 32.6
PSO782G5718 Papaver somniferum HOM05D000607 ORTHO05D000518 2.6e-06 56.2 96 34.4
Actinidia34160 Actinidia chinensis HOM05D000607 ORTHO05D000518 3.4e-06 55.8 63 36.5
Potri.017G147400 Populus trichocarpa HOM05D000607 ORTHO05D000518 3.4e-06 55.8 93 26.9
SalBow4G3096 Salvia bowleyana HOM05D000607 ORTHO05D000518 3.4e-06 55.8 63 41.3
TPR.G33546 Trifolium pratense HOM05D000607 ORTHO05D000518 3.4e-06 55.8 85 28.2
MD01G1209200 Malus domestica HOM05D000607 ORTHO05D000518 4.4e-06 55.5 58 37.9
unitig_749.g13653 Utricularia gibba HOM05D000607 ORTHO05D000518 4.4e-06 55.5 88 30.7
Actinidia08584 Actinidia chinensis HOM05D000607 ORTHO05D000518 5.8e-06 55.1 63 36.5
ClCG01G000900 Citrullus lanatus HOM05D000607 ORTHO05D000518 5.8e-06 55.1 62 35.5
MELO3C005841.2 Cucumis melo HOM05D000607 ORTHO05D000518 5.8e-06 55.1 62 35.5
ECA232G1498 Erigeron canadensis HOM05D000607 ORTHO05D000518 5.8e-06 55.1 63 34.9
Lsat_1_v5_gn_9_56680 Lactuca sativa HOM05D000607 ORTHO05D000518 5.8e-06 55.1 62 37.1
Medtr6g049280 Medicago truncatula HOM05D000607 ORTHO05D000518 5.8e-06 55.1 92 32.6
TWI39G0972 Tripterygium wilfordii HOM05D000607 ORTHO05D000518 5.8e-06 55.1 58 41.4
GSVIVG01028846001 Vitis vinifera HOM05D000607 ORTHO05D000518 5.8e-06 55.1 63 36.5
PSO782G4438 Papaver somniferum HOM05D000607 ORTHO05D000518 7.5e-06 54.7 83 32.5
Sc22g0005310 Simmondsia chinensis HOM05D000607 ORTHO05D000518 7.5e-06 54.7 98 30.6
Solyc06g036310.3 Solanum lycopersicum HOM05D000607 ORTHO05D000518 7.5e-06 54.7 69 31.9
TPR.G33513 Trifolium pratense HOM05D000607 ORTHO05D000518 7.5e-06 54.7 85 27.1
Dinv28383 Davidia involucrata HOM05D000607 ORTHO05D000518 9.8e-06 54.3 63 36.5
Manes.06G153100 Manihot esculenta HOM05D000607 ORTHO05D000518 9.8e-06 54.3 63 36.5


User provided reference genes

Program Settings