Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1715 Utricularia gibba HOM05D002245 ORTHO05D002331 5.3e-56 220.7 105 100.0
unitig_748.g7036 Utricularia gibba HOM05D002245 ORTHO05D002331 2.7e-20 102.1 121 47.9
MSTRG.3732 Avicennia marina HOM05D002245 ORTHO05D002331 3.4e-18 95.1 135 44.4
Migut.K00799 Erythranthe guttata HOM05D002245 ORTHO05D002331 1.8e-16 89.4 133 41.4
SGA_v2.0_scaffold195G40855 Striga asiatica HOM05D002245 ORTHO05D002331 1.8e-16 89.4 124 44.4
MSTRG.15687 Avicennia marina HOM05D002245 ORTHO05D002331 2.7e-15 85.5 125 43.2
Migut.H02290 Erythranthe guttata HOM05D002245 ORTHO05D002331 3.8e-14 81.6 124 41.9
SalBow5G0292 Salvia bowleyana HOM05D002245 ORTHO05D002331 3.8e-14 81.6 122 43.4
SalBow5G1187 Salvia bowleyana HOM05D002245 ORTHO05D002331 3.8e-14 81.6 122 43.4
SGA_v2.0_scaffold108G30922 Striga asiatica HOM05D002245 ORTHO05D002331 3.2e-13 78.6 116 41.4
SGA_v2.0_scaffold45G17233 Striga asiatica HOM05D002245 ORTHO05D002331 7.2e-13 77.4 126 42.1
SalBow3G2232 Salvia bowleyana HOM05D002245 ORTHO05D002331 1.6e-12 76.3 125 41.6
SalBow3G2564 Salvia bowleyana HOM05D002245 ORTHO05D002331 1.6e-12 76.3 125 41.6
Oeu012460.1 Olea europaea HOM05D002245 ORTHO05D002331 2.1e-12 75.9 124 41.9
MSTRG.2597 Avicennia marina HOM05D002245 ORTHO05D002331 2.7e-12 75.5 125 39.2
DCAR_014183 Daucus carota HOM05D002245 ORTHO05D002331 8.8e-11 70.5 106 43.4
Solyc11g010630.4 Solanum lycopersicum HOM05D001877 ORTHO05D001886 1.5e-10 69.7 117 38.5
Sopen11g005440 Solanum pennellii HOM05D002245 ORTHO05D002331 1.5e-10 69.7 117 38.5
PGSC0003DMG400016200 Solanum tuberosum HOM05D002245 ORTHO05D002331 1.5e-10 69.7 117 38.5
Nitab4.5_0007624g0050 Nicotiana tabacum HOM05D002245 ORTHO05D002331 3.4e-10 68.6 126 38.9
Nitab4.5_0013275g0010 Nicotiana tabacum HOM05D001877 ORTHO05D001886 7.5e-10 67.4 113 39.8
Actinidia28824 Actinidia chinensis HOM05D002245 ORTHO05D002331 3.7e-09 65.1 117 41.9
Peaxi162Scf00474g00610 Petunia axillaris HOM05D002245 ORTHO05D002331 6.3e-09 64.3 122 37.7
unitig_736.g22588 Utricularia gibba HOM05D002245 ORTHO05D002331 8.3e-09 63.9 118 35.6
TAR625G1287 Trochodendron aralioides HOM05D002245 ORTHO05D002331 1.1e-08 63.5 117 39.3
Hma1.2p1_0433F.1_g152070 Hydrangea macrophylla HOM05D002245 ORTHO05D002331 1.4e-08 63.2 117 40.2
Cc07_g14080 Coffea canephora HOM05D002245 ORTHO05D002331 2.4e-08 62.4 119 38.7
MBI16_g27577_MAGBIO Magnolia biondii HOM05D002245 ORTHO05D002331 2.4e-08 62.4 117 39.3
MSTRG.23379 Avicennia marina HOM05D002245 ORTHO05D002331 3.1e-08 62.0 120 40.0
Dinv13600 Davidia involucrata HOM05D002245 ORTHO05D002331 3.1e-08 62.0 117 37.6
vmacro13009 Vaccinium macrocarpon HOM05D002245 ORTHO05D002331 3.1e-08 62.0 117 36.8
MD01G1039500 Malus domestica HOM05D002245 ORTHO05D002331 7.0e-08 60.8 125 36.8
Rhsim10G0173000 Rhododendron simsii HOM05D002245 ORTHO05D002331 7.0e-08 60.8 110 42.7
FAN23G0228 Fragaria x ananassa HOM05D002245 ORTHO05D002331 9.2e-08 60.5 118 37.3
FAN28G2025 Fragaria x ananassa HOM05D002245 ORTHO05D002331 9.2e-08 60.5 118 37.3
TAR381G1493 Trochodendron aralioides HOM05D002245 ORTHO05D002331 9.2e-08 60.5 103 40.8
FvH4_1g19630 Fragaria vesca HOM05D002245 ORTHO05D002331 1.2e-07 60.1 118 37.3
FAN19G0702 Fragaria x ananassa HOM05D002245 ORTHO05D002331 1.2e-07 60.1 118 37.3
FAN26G3080 Fragaria x ananassa HOM05D002245 ORTHO05D002331 1.2e-07 60.1 118 37.3
Aqoxy6G00866 Aquilegia oxysepala HOM05D002245 ORTHO05D002331 1.6e-07 59.7 117 35.0
PSO541G6134 Papaver somniferum HOM05D002245 ORTHO05D002331 1.6e-07 59.7 97 40.2
vmacro18558 Vaccinium macrocarpon HOM05D002245 ORTHO05D002331 1.6e-07 59.7 124 37.9
CSS0011978 Camellia sinensis var. sinensis HOM05D002245 ORTHO05D002331 2.0e-07 59.3 118 39.8
CSS0014480 Camellia sinensis var. sinensis HOM05D002245 ORTHO05D002331 2.0e-07 59.3 118 39.8
AUR62003665 Chenopodium quinoa HOM05D001877 ORTHO05D001886 3.5e-07 58.5 44 61.4
AUR62017974 Chenopodium quinoa HOM05D002245 ORTHO05D002331 3.5e-07 58.5 44 61.4
Lj4P717T28 Lonicera japonica HOM05D002245 ORTHO05D002331 3.5e-07 58.5 37 70.3
Lj4P737T43 Lonicera japonica HOM05D002245 ORTHO05D002331 3.5e-07 58.5 37 70.3
Nitab4.5_0000131g0230 Nicotiana tabacum HOM05D001877 ORTHO05D001886 3.5e-07 58.5 37 70.3
Peaxi162Scf00454g00411 Petunia axillaris HOM05D002245 ORTHO05D002331 3.5e-07 58.5 37 70.3
Prupe.6G201800 Prunus persica HOM05D002245 ORTHO05D002331 3.5e-07 58.5 118 36.4
RcHm_v2.0_Chr2g0111191 Rosa chinensis HOM05D002245 ORTHO05D002331 3.5e-07 58.5 118 36.4
vmacro21341 Vaccinium macrocarpon HOM05D002245 ORTHO05D002331 3.5e-07 58.5 121 37.2
Phvul.002G147000 Phaseolus vulgaris HOM05D002245 ORTHO05D002331 4.5e-07 58.2 119 38.7
Sc03g0000350 Simmondsia chinensis HOM05D002245 ORTHO05D002331 4.5e-07 58.2 44 61.4
unitig_899.g14568 Utricularia gibba HOM05D002245 ORTHO05D002331 4.5e-07 58.2 106 36.8
VMungo1215G1381 Vigna mungo HOM05D002245 ORTHO05D002331 4.5e-07 58.2 119 39.5
Nn5g29876 Nelumbo nucifera HOM05D002245 ORTHO05D002331 5.9e-07 57.8 103 38.8
SMO197G0003 Selaginella moellendorffii HOM05D002245 ORTHO05D002331 5.9e-07 57.8 35 65.7
HPP92_010020 Vanilla planifolia HOM05D002245 ORTHO05D002331 5.9e-07 57.8 40 62.5
HPP92_015291 Vanilla planifolia HOM05D002245 ORTHO05D002331 5.9e-07 57.8 40 62.5
FAN04G0974 Fragaria x ananassa HOM05D002245 ORTHO05D002331 7.7e-07 57.4 101 39.6
FAN13G2904 Fragaria x ananassa HOM05D002245 ORTHO05D002331 7.7e-07 57.4 117 37.6
Nitab4.5_0005913g0010 Nicotiana tabacum HOM05D001877 ORTHO05D001886 7.7e-07 57.4 36 69.4
Hund16528 Selenicereus undatus HOM05D002245 ORTHO05D002331 7.7e-07 57.4 44 61.4
Actinidia25307 Actinidia chinensis HOM05D002245 ORTHO05D002331 1.0e-06 57.0 119 36.1
Cfa013798 Carpinus fangiana HOM05D002245 ORTHO05D002331 1.0e-06 57.0 89 39.3
Nitab4.5_0000354g0160 Nicotiana tabacum HOM05D002245 ORTHO05D002331 1.0e-06 57.0 37 70.3
Nitab4.5_0001607g0140 Nicotiana tabacum HOM05D002245 ORTHO05D002331 1.0e-06 57.0 37 70.3
Rhsim08G0016500 Rhododendron simsii HOM05D002245 ORTHO05D002331 1.0e-06 57.0 122 37.7
Glyma.08G279400 Glycine max HOM05D002245 ORTHO05D002331 1.3e-06 56.6 41 61.0
Actinidia06512 Actinidia chinensis HOM05D002245 ORTHO05D002331 1.7e-06 56.2 37 70.3
CDE01G0638 Ceratophyllum demersum HOM05D002245 ORTHO05D002331 1.7e-06 56.2 107 36.4
Dinv42611 Davidia involucrata HOM05D002245 ORTHO05D002331 1.7e-06 56.2 37 70.3
Dinv44862 Davidia involucrata HOM05D002245 ORTHO05D002331 1.7e-06 56.2 37 70.3
Hma1.2p1_0125F.1_g058850 Hydrangea macrophylla HOM05D002245 ORTHO05D002331 1.7e-06 56.2 37 70.3
MBI16_g12468_MAGBIO Magnolia biondii HOM05D002245 ORTHO05D002331 1.7e-06 56.2 103 35.9
Prupe.1G532300 Prunus persica HOM05D002245 ORTHO05D002331 1.7e-06 56.2 42 61.9
PGR031G1901 Punica granatum HOM05D002245 ORTHO05D002331 1.7e-06 56.2 37 70.3
Rhsim06G0071500 Rhododendron simsii HOM05D002245 ORTHO05D002331 1.7e-06 56.2 119 36.1
CiPaw.08G055700 Carya illinoinensis HOM05D002245 ORTHO05D002331 2.3e-06 55.8 37 70.3
Haze_22461 Corylus avellana HOM05D002245 ORTHO05D002331 2.3e-06 55.8 37 70.3
Dinv36932 Davidia involucrata HOM05D002245 ORTHO05D002331 2.3e-06 55.8 38 68.4
Cc10_g15900 Coffea canephora HOM05D002245 ORTHO05D002331 2.9e-06 55.5 37 67.6
DCAR_009560 Daucus carota HOM05D002245 ORTHO05D002331 2.9e-06 55.5 42 64.3
Lalb_Chr08g0242541 Lupinus albus HOM05D002245 ORTHO05D002331 2.9e-06 55.5 44 59.1
PSO210G6426 Papaver somniferum HOM05D002245 ORTHO05D002331 2.9e-06 55.5 46 54.3
Solyc12g087960.2 Solanum lycopersicum HOM05D002245 ORTHO05D002331 2.9e-06 55.5 37 67.6
Sopen12g029990 Solanum pennellii HOM05D002245 ORTHO05D002331 2.9e-06 55.5 37 67.6
PGSC0003DMG400002036 Solanum tuberosum HOM05D002245 ORTHO05D002331 2.9e-06 55.5 37 67.6
Ah.03g139950 Amaranthus hybridus HOM05D002245 ORTHO05D002331 3.8e-06 55.1 85 41.2
FvH4_5g34720 Fragaria vesca HOM05D002245 ORTHO05D002331 3.8e-06 55.1 118 38.1
FAN18G4003 Fragaria x ananassa HOM05D002245 ORTHO05D002331 3.8e-06 55.1 118 38.1
Lalb_Chr09g0325981 Lupinus albus HOM05D002245 ORTHO05D002331 3.8e-06 55.1 37 67.6
Atru.chr3.1244 Acer truncatum HOM05D002245 ORTHO05D002331 5.0e-06 54.7 37 67.6
arahy.Tifrunner.gnm1.ann1.J6ZURK Arachis hypogaea HOM05D002245 ORTHO05D002331 5.0e-06 54.7 38 65.8
arahy.Tifrunner.gnm1.ann1.WUS189 Arachis hypogaea HOM05D002245 ORTHO05D002331 5.0e-06 54.7 38 65.8
DCAR_015156 Daucus carota HOM05D002245 ORTHO05D002331 5.0e-06 54.7 81 42.0
HanXRQChr15g0484851 Helianthus annuus HOM05D002245 ORTHO05D002331 5.0e-06 54.7 40 65.0
Psat2g089080 Pisum sativum HOM05D002245 ORTHO05D002331 5.0e-06 54.7 87 40.2
RcHm_v2.0_Chr7g0235401 Rosa chinensis HOM05D002245 ORTHO05D002331 5.0e-06 54.7 119 39.5
Sc16g0000550 Simmondsia chinensis HOM05D002245 ORTHO05D002331 5.0e-06 54.7 40 62.5
EL10Ac6g15203 Beta vulgaris HOM05D001877 ORTHO05D001886 6.6e-06 54.3 40 62.5
CiPaw.07G165300 Carya illinoinensis HOM05D002245 ORTHO05D002331 6.6e-06 54.3 37 67.6
Ciclev10026628m.g Citrus clementina HOM05D002245 ORTHO05D002331 6.6e-06 54.3 37 67.6
ECA232G0228 Erigeron canadensis HOM05D002245 ORTHO05D002331 6.6e-06 54.3 39 66.7
Lju188C3G2 Lonicera japonica HOM05D002245 ORTHO05D002331 6.6e-06 54.3 41 63.4
MD15G1312200 Malus domestica HOM05D002245 ORTHO05D002331 6.6e-06 54.3 119 33.6
Pp3c27_8200 Physcomitrium patens HOM05D002245 ORTHO05D002331 6.6e-06 54.3 35 60.0
Solyc04g076340.3 Solanum lycopersicum HOM05D002245 ORTHO05D002331 6.6e-06 54.3 37 64.9
Sopen00g012600 Solanum pennellii HOM05D002245 ORTHO05D002331 6.6e-06 54.3 37 64.9
PGSC0003DMG400009360 Solanum tuberosum HOM05D002245 ORTHO05D002331 6.6e-06 54.3 37 64.9
TWI74G0712 Tripterygium wilfordii HOM05D002245 ORTHO05D002331 6.6e-06 54.3 109 37.6
TAR376G0694 Trochodendron aralioides HOM05D002245 ORTHO05D002331 6.6e-06 54.3 37 70.3
TAR628G0555 Trochodendron aralioides HOM05D002245 ORTHO05D002331 6.6e-06 54.3 102 37.3
ATR0767G149 Amborella trichopoda HOM05D002245 ORTHO05D002331 8.6e-06 53.9 42 61.9
Cpa.g.sc55.23 Carica papaya HOM05D002245 ORTHO05D002331 8.6e-06 53.9 119 41.2
CiPaw.08G140300 Carya illinoinensis HOM05D002245 ORTHO05D002331 8.6e-06 53.9 116 37.1
CDE02G3963 Ceratophyllum demersum HOM05D002245 ORTHO05D002331 8.6e-06 53.9 106 36.8
Ca_22704_v3 Cicer arietinum L. HOM05D002245 ORTHO05D002331 8.6e-06 53.9 93 37.6
Manes.13G100300 Manihot esculenta HOM05D002245 ORTHO05D002331 8.6e-06 53.9 120 36.7
Medtr5g032070 Medicago truncatula HOM05D002245 ORTHO05D002331 8.6e-06 53.9 40 62.5


User provided reference genes

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