Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g169 Utricularia gibba HOM05D000259 ORTHO05D000155 1.4e-82 309.7 165 100.0
Migut.D00493 Erythranthe guttata HOM05D000259 ORTHO05D000155 8.1e-35 151.0 227 45.8
SGA_v2.0_scaffold1G00695 Striga asiatica HOM05D000259 ORTHO05D000155 3.3e-28 129.0 221 41.2
Cc01_g17550 Coffea canephora HOM05D000259 ORTHO05D000155 2.8e-27 125.9 218 42.2
Gohir.A07G153800 Gossypium hirsutum HOM05D000259 ORTHO05D000155 2.9e-24 115.9 179 43.6
Nitab4.5_0000392g0020 Nicotiana tabacum HOM05D000259 ORTHO05D000155 6.4e-24 114.8 212 37.3
Haze_24729 Corylus avellana HOM05D000259 ORTHO05D000155 2.4e-23 112.8 216 40.7
Peaxi162Scf00043g00177 Petunia axillaris HOM05D000259 ORTHO05D000155 3.2e-23 112.5 224 37.1
Solyc09g064230.3 Solanum lycopersicum HOM05D000259 ORTHO05D000155 3.2e-23 112.5 225 37.3
Sopen09g025440 Solanum pennellii HOM05D000259 ORTHO05D000155 4.2e-23 112.1 225 36.9
PGSC0003DMG400009746 Solanum tuberosum HOM05D000259 ORTHO05D000155 1.2e-22 110.5 220 35.9
TWI12G1365 Tripterygium wilfordii HOM05D000259 ORTHO05D000155 2.7e-22 109.4 219 40.2
CSS0013802 Camellia sinensis var. sinensis HOM05D000259 ORTHO05D000155 7.9e-22 107.8 212 39.2
Nitab4.5_0000385g0150 Nicotiana tabacum HOM05D000259 ORTHO05D000155 1.3e-21 107.1 214 36.9
RcHm_v2.0_Chr6g0285931 Rosa chinensis HOM05D000259 ORTHO05D000155 1.8e-21 106.7 216 38.4
Duzib138G0237 Durio zibethinus HOM05D000259 ORTHO05D000155 2.3e-21 106.3 219 35.6
Gohir.D07G159900 Gossypium hirsutum HOM05D000259 ORTHO05D000155 3.9e-21 105.5 222 37.4
Cfa002505 Carpinus fangiana HOM05D000259 ORTHO05D000155 1.1e-20 104.0 214 40.7
TAR365G1239 Trochodendron aralioides HOM05D000259 ORTHO05D000155 1.5e-20 103.6 225 39.1
Gorai.001G183000 Gossypium raimondii HOM05D000259 ORTHO05D000155 5.6e-20 101.7 218 36.7
Rhsim01G0259200 Rhododendron simsii HOM05D000259 ORTHO05D000155 5.6e-20 101.7 221 38.5
Sabra02G0193500 Salix brachista HOM05D000259 ORTHO05D000155 9.6e-20 100.9 219 37.0
GSVIVG01028466001 Vitis vinifera HOM05D000259 ORTHO05D000155 9.6e-20 100.9 215 36.3
CAN.G608.17 Capsicum annuum HOM05D000259 ORTHO05D000155 1.3e-19 100.5 252 32.9
Ciclev10024404m.g Citrus clementina HOM05D000259 ORTHO05D000155 1.3e-19 100.5 214 36.9
FvH4_2g20170 Fragaria vesca HOM05D000259 ORTHO05D000155 2.1e-19 99.8 216 37.0
FAN24G2657 Fragaria x ananassa HOM05D000259 ORTHO05D000155 2.1e-19 99.8 216 37.0
FAN27G0492 Fragaria x ananassa HOM05D000259 ORTHO05D000155 2.1e-19 99.8 216 37.0
Manes.12G039600 Manihot esculenta HOM05D000259 ORTHO05D000155 3.6e-19 99.0 133 46.6
FAN15G3559 Fragaria x ananassa HOM05D000259 ORTHO05D000155 4.8e-19 98.6 216 36.6
DCAR_018531 Daucus carota HOM05D000259 ORTHO05D000155 1.1e-18 97.4 215 36.3
QL09p042926 Quercus lobata HOM05D000259 ORTHO05D000155 1.1e-18 97.4 223 38.6
Atru.chr5.1910 Acer truncatum HOM05D000259 ORTHO05D000155 9.0e-18 94.4 209 34.0
Prupe.8G211500 Prunus persica HOM05D000259 ORTHO05D000155 1.2e-17 94.0 229 36.2
BcaC07g42205 Brassica carinata HOM05D000259 ORTHO05D000155 4.5e-17 92.0 207 34.8
BolC8t52773H Brassica oleracea HOM05D000259 ORTHO05D000155 2.2e-16 89.7 207 34.3
Cpa.g.sc87.68 Carica papaya HOM05D000259 ORTHO05D000155 4.9e-16 88.6 227 34.8
COL.COLO4_24811 Corchorus olitorius HOM05D000259 ORTHO05D000155 6.4e-16 88.2 220 32.7
Nn1g03056 Nelumbo nucifera HOM05D000259 ORTHO05D000155 1.9e-15 86.7 229 33.2
Oeu015442.1 Olea europaea HOM05D000259 ORTHO05D000155 2.4e-15 86.3 54 79.6
Eucgr.K03580 Eucalyptus grandis HOM05D000259 ORTHO05D000155 7.1e-15 84.7 213 34.3
CANSAT01G1627 Cannabis sativa HOM05D000259 ORTHO05D000155 1.2e-14 84.0 209 38.8
Thhalv10006667m.g Eutrema salsugineum HOM05D000259 ORTHO05D000155 1.6e-14 83.6 213 33.3
BcaC07g42206 Brassica carinata HOM05D000259 ORTHO05D000155 2.7e-14 82.8 208 32.2
vmacro14784 Vaccinium macrocarpon HOM05D000259 ORTHO05D000155 4.6e-14 82.0 212 34.9
MBI10_g26065_MAGBIO Magnolia biondii HOM05D000259 ORTHO05D000155 6.0e-14 81.6 131 42.0
Sp1g02970 Schrenkiella parvula HOM05D000259 ORTHO05D000155 7.9e-14 81.3 218 33.5
Ah.15g091570 Amaranthus hybridus HOM05D000259 ORTHO05D000155 1.3e-13 80.5 222 32.4
HanXRQChr15g0468171 Helianthus annuus HOM05D000259 ORTHO05D000155 1.3e-13 80.5 211 34.6
C08p52460 Brassica napus HOM05D000259 ORTHO05D000155 3.0e-13 79.3 207 32.9
Aqoxy2G03813 Aquilegia oxysepala HOM05D000259 ORTHO05D000155 6.7e-13 78.2 132 38.6
Potri.002G254400 Populus trichocarpa HOM05D000259 ORTHO05D000155 1.1e-12 77.4 223 32.3
Lsat_1_v5_gn_9_11861 Lactuca sativa HOM05D000259 ORTHO05D000155 1.5e-12 77.0 224 32.1
A09p68020 Brassica napus HOM05D000259 ORTHO05D000155 2.5e-12 76.3 212 31.1
BraA09t42137Z Brassica rapa HOM05D000259 ORTHO05D000155 2.5e-12 76.3 212 31.1
MD05G1185200 Malus domestica HOM05D000259 ORTHO05D000155 2.5e-12 76.3 225 34.2
AL1G13750 Arabidopsis lyrata HOM05D000259 ORTHO05D000155 4.3e-12 75.5 216 31.9
Carub.0001s0330 Capsella rubella HOM05D000259 ORTHO05D000155 9.6e-12 74.3 129 41.1
Thecc.01G246400 Theobroma cacao HOM05D000259 ORTHO05D000155 9.6e-12 74.3 144 41.0
EL10Ac7g17736 Beta vulgaris HOM05D000259 ORTHO05D000155 1.4e-10 70.5 144 36.8
AT1G04150 Arabidopsis thaliana HOM05D000259 ORTHO05D000155 3.1e-10 69.3 216 30.1
ECA247G0536 Erigeron canadensis HOM05D000259 ORTHO05D000155 3.1e-10 69.3 140 37.9
Lalb_Chr02g0152881 Lupinus albus HOM05D000259 ORTHO05D000155 5.3e-10 68.6 46 71.7
PSO732G0562 Papaver somniferum HOM05D000259 ORTHO05D000155 1.2e-09 67.4 143 33.6
CDE01G0530 Ceratophyllum demersum HOM05D000259 ORTHO05D000155 1.5e-09 67.0 208 33.2
PSO675G1209 Papaver somniferum HOM05D000259 ORTHO05D000155 2.0e-09 66.6 143 33.6
Sc05g0002550 Simmondsia chinensis HOM05D000259 ORTHO05D000155 3.4e-09 65.9 188 32.4
Actinidia23706 Actinidia chinensis HOM05D000259 ORTHO05D000155 4.9e-08 62.0 178 32.0
ATR0723G002 Amborella trichopoda HOM05D000259 ORTHO05D000155 6.5e-08 61.6 126 34.1
SEGI_02490 Sequoiadendron giganteum HOM05D000259 ORTHO05D000155 1.9e-07 60.1 41 63.4
ATR0605G046 Amborella trichopoda HOM05D000259 ORTHO05D000155 1.2e-06 57.4 66 47.0
unitig_37.g13111 Utricularia gibba HOM05D000259 ORTHO05D000155 3.5e-06 55.8 73 42.5
SEGI_30545 Sequoiadendron giganteum HOM05D000259 ORTHO05D000155 7.9e-06 54.7 71 42.3


User provided reference genes

Program Settings