Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1642 Utricularia gibba HOM05D004735 ORTHO05D005243 0.0e+00 1191.4 589 100.0
SalBow4G2972 Salvia bowleyana HOM05D004735 ORTHO05D005243 5.5e-102 375.9 712 36.9
Migut.F00010 Erythranthe guttata HOM05D004735 ORTHO05D005243 2.1e-101 374.0 719 36.4
MSTRG.24121 Avicennia marina HOM05D004735 ORTHO05D005243 9.8e-91 338.6 686 35.9
Oeu035383.1 Olea europaea HOM05D004735 ORTHO05D005243 2.0e-80 304.3 704 33.4
Oeu035273.1 Olea europaea HOM05D004735 ORTHO05D005243 1.6e-72 278.1 629 33.9
Actinidia37716 Actinidia chinensis HOM05D004735 ORTHO05D005243 2.0e-72 277.7 716 31.8
SGA_v2.0_scaffold423G51443 Striga asiatica HOM05D004735 ORTHO05D005243 3.5e-72 276.9 689 32.2
Dinv25616 Davidia involucrata HOM05D004735 ORTHO05D005243 7.3e-70 269.2 718 30.9
GSVIVG01032979001 Vitis vinifera HOM05D004735 ORTHO05D005243 7.8e-64 249.2 678 30.4
CSS0022550 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.3e-63 248.4 693 31.0
Dinv33275 Davidia involucrata HOM05D004735 ORTHO05D005243 1.7e-63 248.1 698 30.7
Thecc.04G048500 Theobroma cacao HOM05D004735 ORTHO05D005243 2.3e-63 247.7 694 30.4
Manes.11G076100 Manihot esculenta HOM05D004735 ORTHO05D005243 1.5e-59 235.0 742 28.8
Gorai.007G073000 Gossypium raimondii HOM05D004735 ORTHO05D005243 5.8e-59 233.0 682 30.4
Gohir.D11G068200 Gossypium hirsutum HOM05D004735 ORTHO05D005243 3.7e-58 230.3 682 30.4
Prupe.3G314000 Prunus persica HOM05D004735 ORTHO05D005243 3.2e-57 227.3 690 29.0
Duzib187G1028 Durio zibethinus HOM05D004735 ORTHO05D005243 1.7e-55 221.5 694 29.4
Duzib264G0086 Durio zibethinus HOM05D004735 ORTHO05D005243 2.3e-55 221.1 701 29.4
vmacro18383 Vaccinium macrocarpon HOM05D004735 ORTHO05D005243 3.0e-55 220.7 708 30.5
Hma1.2p1_0421F.1_g149860 Hydrangea macrophylla HOM05D004735 ORTHO05D005243 5.1e-55 219.9 697 29.4
Duzib147G0188 Durio zibethinus HOM05D004735 ORTHO05D005243 6.6e-55 219.5 692 28.9
Sabra14G0108800 Salix brachista HOM05D004735 ORTHO05D005243 6.6e-55 219.5 691 29.2
Sabra02G0181300 Salix brachista HOM05D004735 ORTHO05D005243 9.5e-54 215.7 723 30.4
Manes.04G093600 Manihot esculenta HOM05D004735 ORTHO05D005243 2.8e-53 214.2 763 27.0
Potri.014G144100 Populus trichocarpa HOM05D004735 ORTHO05D005243 3.6e-53 213.8 710 29.0
Potri.002G237800 Populus trichocarpa HOM05D004735 ORTHO05D005243 1.4e-52 211.8 700 28.6
Cfa007143 Carpinus fangiana HOM05D004735 ORTHO05D005243 4.0e-52 210.3 706 27.1
Atru.chr6.2700 Acer truncatum HOM05D004735 ORTHO05D005243 5.2e-52 209.9 700 26.6
Gorai.011G088500 Gossypium raimondii HOM05D004735 ORTHO05D005243 6.8e-52 209.5 695 27.8
Gohir.A10G069900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 8.9e-52 209.1 692 28.3
RcHm_v2.0_Chr2g0176561 Rosa chinensis HOM05D004735 ORTHO05D005243 1.5e-51 208.4 703 27.0
Gohir.D10G081300 Gossypium hirsutum HOM05D004735 ORTHO05D005243 5.8e-51 206.5 691 27.8
DCAR_014465 Daucus carota HOM05D004735 ORTHO05D005243 7.6e-51 206.1 636 28.0
Hund12196 Selenicereus undatus HOM05D004735 ORTHO05D005243 3.8e-50 203.8 753 25.4
MD09G1002200 Malus domestica HOM05D004735 ORTHO05D005243 1.9e-49 201.4 683 27.1
MD17G1006400 Malus domestica HOM05D004735 ORTHO05D005243 2.7e-48 197.6 677 27.6
Nitab4.5_0002172g0170 Nicotiana tabacum HOM05D004735 ORTHO05D005243 7.8e-48 196.1 373 35.4
TAR629G0422 Trochodendron aralioides HOM05D004735 ORTHO05D005243 3.0e-47 194.1 710 27.6
Sc03g0005270 Simmondsia chinensis HOM05D004735 ORTHO05D005243 3.9e-47 193.7 755 27.2
TWI32G0607 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 3.9e-47 193.7 699 27.5
Sopen02g039210 Solanum pennellii HOM05D004735 ORTHO05D005243 8.7e-47 192.6 766 25.1
Haze_14980 Corylus avellana HOM05D004735 ORTHO05D005243 1.9e-46 191.4 758 25.7
Nitab4.5_0000519g0300 Nicotiana tabacum HOM05D004735 ORTHO05D005243 2.5e-46 191.0 369 35.5
TWI60G1686 Tripterygium wilfordii HOM05D004735 ORTHO05D005243 9.6e-46 189.1 691 26.8
Glyma.16G147800 Glycine max HOM05D004735 ORTHO05D005243 6.2e-45 186.4 766 25.6
CAN.G473.160 Capsicum annuum HOM05D004735 ORTHO05D005243 8.1e-45 186.0 383 33.4
CiPaw.03G001400 Carya illinoinensis HOM05D004735 ORTHO05D005243 1.4e-44 185.3 702 26.2
CANSAT64G0702 Cannabis sativa HOM05D004735 ORTHO05D005243 6.9e-44 183.0 707 26.0
Psat0s787g0080 Pisum sativum HOM05D004735 ORTHO05D005243 5.8e-43 179.9 724 26.7
FAN02G4354 Fragaria x ananassa HOM05D004735 ORTHO05D005243 9.9e-43 179.1 698 26.4
Glyma.02G066700 Glycine max HOM05D004735 ORTHO05D005243 2.2e-42 177.9 754 24.8
Nn4g22117 Nelumbo nucifera HOM05D004735 ORTHO05D005243 2.9e-42 177.6 700 25.1
VMungo0464G0888 Vigna mungo HOM05D004735 ORTHO05D005243 2.9e-42 177.6 747 25.8
Lsat_1_v5_gn_3_104900 Lactuca sativa HOM05D004735 ORTHO05D005243 1.1e-41 175.6 712 27.1
Ca_16589_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 2.4e-41 174.5 738 25.6
HanXRQChr15g0475721 Helianthus annuus HOM05D004735 ORTHO05D005243 2.4e-41 174.5 600 26.8
Phvul.004G069600 Phaseolus vulgaris HOM05D004735 ORTHO05D005243 5.4e-41 173.3 764 24.9
FvH4_6g54340 Fragaria vesca HOM05D004735 ORTHO05D005243 9.3e-41 172.6 702 25.4
Cpa.g.sc70.59 Carica papaya HOM05D004735 ORTHO05D005243 1.6e-40 171.8 778 25.6
Lj2g0010549 Lotus japonicus HOM05D004735 ORTHO05D005243 2.1e-40 171.4 690 27.1
FAN05G2416 Fragaria x ananassa HOM05D004735 ORTHO05D005243 3.5e-40 170.6 695 25.5
FAN09G0836 Fragaria x ananassa HOM05D004735 ORTHO05D005243 3.5e-40 170.6 705 25.2
FAN14G4878 Fragaria x ananassa HOM05D004735 ORTHO05D005243 3.5e-40 170.6 705 25.2
arahy.Tifrunner.gnm1.ann1.X964XN Arachis hypogaea HOM05D004735 ORTHO05D005243 4.6e-40 170.2 719 25.6
QL02p069299 Quercus lobata HOM05D004735 ORTHO05D005243 1.7e-39 168.3 790 23.5
AUR62030086 Chenopodium quinoa HOM05D004735 ORTHO05D005243 8.7e-39 166.0 487 29.4
Rhsim08G0038800 Rhododendron simsii HOM05D004735 ORTHO05D005243 8.7e-39 166.0 450 29.8
Lj1g0021966 Lotus japonicus HOM05D004735 ORTHO05D005243 1.1e-38 165.6 684 25.7
HanXRQChr17g0550891 Helianthus annuus HOM05D004735 ORTHO05D005243 1.9e-38 164.9 641 26.5
Medtr6g033235 Medicago truncatula HOM05D004735 ORTHO05D005243 2.5e-38 164.5 757 24.3
Lalb_Chr02g0156851 Lupinus albus HOM05D004735 ORTHO05D005243 3.3e-38 164.1 418 30.4
Lalb_Chr21g0316971 Lupinus albus HOM05D004735 ORTHO05D005243 3.6e-37 160.6 420 30.2
THA.LOC104802362 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 8.1e-37 159.5 571 27.8
arahy.Tifrunner.gnm1.ann1.HAHJ6R Arachis hypogaea HOM05D004735 ORTHO05D005243 1.4e-36 158.7 738 24.9
ECA246G4565 Erigeron canadensis HOM05D004735 ORTHO05D005243 1.4e-36 158.7 632 26.7
AUR62038220 Chenopodium quinoa HOM05D004735 ORTHO05D005243 5.3e-36 156.8 483 29.0
PSO478G1205 Papaver somniferum HOM05D004735 ORTHO05D005243 2.6e-35 154.5 672 25.6
AL6G24610 Arabidopsis lyrata HOM05D004735 ORTHO05D005243 9.9e-35 152.5 569 27.1
CiPaw.04G001000 Carya illinoinensis HOM05D004735 ORTHO05D005243 1.7e-34 151.8 632 25.9
PSO017G6705 Papaver somniferum HOM05D004735 ORTHO05D005243 4.9e-34 150.2 669 25.4
TPR.G15417 Trifolium pratense HOM05D004735 ORTHO05D005243 4.9e-34 150.2 751 24.2
Carub.0006s1214 Capsella rubella HOM05D004735 ORTHO05D005243 6.4e-34 149.8 583 27.1
CsaV3_5G024940 Cucumis sativus L. HOM05D004735 ORTHO05D005243 6.4e-34 149.8 417 29.5
Ah.07g203970 Amaranthus hybridus HOM05D004735 ORTHO05D005243 8.4e-34 149.4 724 26.2
Medtr7g084170 Medicago truncatula HOM05D004735 ORTHO05D005243 1.1e-33 149.1 779 24.6
Cc07_g01350 Coffea canephora HOM05D004735 ORTHO05D005243 4.2e-33 147.1 445 28.3
Gohir.A11G063833 Gossypium hirsutum HOM05D004735 ORTHO05D005243 4.2e-33 147.1 489 29.2
Lj7A617T74 Lonicera japonica HOM05D004735 ORTHO05D005243 7.1e-33 146.4 462 29.0
Ah.13g074210 Amaranthus hybridus HOM05D004735 ORTHO05D005243 2.1e-32 144.8 498 27.5
AT5G13950 Arabidopsis thaliana HOM05D004735 ORTHO05D005243 2.1e-32 144.8 482 27.8
CARHR199450 Cardamine hirsuta HOM05D004735 ORTHO05D005243 2.1e-32 144.8 445 28.5
Gohir.A11G063900 Gossypium hirsutum HOM05D004735 ORTHO05D005243 2.7e-32 144.4 400 31.0
Ca_08203_v3 Cicer arietinum L. HOM05D004735 ORTHO05D005243 4.6e-32 143.7 439 29.6
Lj7A617T73 Lonicera japonica HOM05D004735 ORTHO05D005243 4.6e-32 143.7 125 59.2
BolC9t59152H Brassica oleracea HOM05D004735 ORTHO05D005243 6.0e-32 143.3 668 25.4
ClCG01G007860 Citrullus lanatus HOM05D004735 ORTHO05D005243 1.0e-31 142.5 402 30.1
Thhalv10012594m.g Eutrema salsugineum HOM05D004735 ORTHO05D005243 1.0e-31 142.5 488 27.7
Sed0022562 Sechium edule HOM05D004735 ORTHO05D005243 1.8e-31 141.7 567 26.1
COL.COLO4_13380 Corchorus olitorius HOM05D004735 ORTHO05D005243 8.7e-31 139.4 443 28.9
Eucgr.G01927 Eucalyptus grandis HOM05D004735 ORTHO05D005243 8.7e-31 139.4 779 23.6
CDE06G2773 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 1.9e-30 138.3 361 29.6
MELO3C005100.2 Cucumis melo HOM05D004735 ORTHO05D005243 1.9e-30 138.3 417 28.8
Psat3g093080 Pisum sativum HOM05D004735 ORTHO05D005243 3.3e-30 137.5 493 27.2
ATR0582G141 Amborella trichopoda HOM05D004735 ORTHO05D005243 4.3e-30 137.1 475 26.9
MBI07_g13942_MAGBIO Magnolia biondii HOM05D004735 ORTHO05D005243 9.6e-30 136.0 740 23.6
Sp6g30050 Schrenkiella parvula HOM05D004735 ORTHO05D005243 1.3e-29 135.6 698 24.9
Aa31LG11G15430 Aethionema arabicum HOM05D004735 ORTHO05D005243 1.6e-29 135.2 430 27.7
Cc07_g01340 Coffea canephora HOM05D004735 ORTHO05D005243 2.1e-29 134.8 132 49.2
C09p63170 Brassica napus HOM05D004735 ORTHO05D005243 3.7e-29 134.0 665 25.0
BolC3t13230H Brassica oleracea HOM05D004735 ORTHO05D005243 1.8e-28 131.7 667 24.4
EL10Ac3g06356 Beta vulgaris HOM05D004735 ORTHO05D005243 3.1e-28 131.0 472 26.3
C03p07280 Brassica napus HOM05D004735 ORTHO05D005243 5.3e-28 130.2 667 24.4
BcaB01g05325 Brassica carinata HOM05D004735 ORTHO05D005243 6.9e-28 129.8 403 29.8
A10p24440 Brassica napus HOM05D004735 ORTHO05D005243 2.0e-27 128.3 668 24.6
CSS0050200 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.0e-26 125.9 125 52.0
Gohir.A11G063866 Gossypium hirsutum HOM05D004735 ORTHO05D005243 3.8e-26 124.0 125 52.0
THA.LOC104821139 Tarenaya hassleriana HOM05D004735 ORTHO05D005243 3.2e-25 120.9 759 24.2
CSS0035487 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 5.5e-25 120.2 124 50.8
TAR371G0169 Trochodendron aralioides HOM05D004735 ORTHO05D008917 5.5e-25 120.2 333 30.0
TPR.G30897 Trifolium pratense HOM05D004735 ORTHO05D005243 2.1e-24 118.2 131 48.1
Peaxi162Scf00420g00843 Petunia axillaris HOM05D004735 ORTHO05D005243 2.7e-24 117.9 142 43.7
Lalb_Chr22g0359831 Lupinus albus HOM05D004735 ORTHO05D005243 1.3e-23 115.5 378 28.3
Ciclev10014280m.g Citrus clementina HOM05D004735 ORTHO05D005243 3.0e-23 114.4 526 24.9
Zm00001eb307010 Zea mays HOM05D004735 ORTHO05D005243 6.7e-23 113.2 353 28.6
Actinidia19551 Actinidia chinensis HOM05D004735 ORTHO05D005243 8.7e-23 112.8 93 58.1
PGR042G1405 Punica granatum HOM05D004735 ORTHO05D005243 3.3e-22 110.9 425 26.4
Solyc02g094530.1 Solanum lycopersicum HOM05D004735 ORTHO05D005243 7.4e-22 109.8 133 42.1
Lalb_Chr22g0359841 Lupinus albus HOM05D004735 ORTHO05D005243 4.8e-21 107.1 129 42.6
CSS0009135 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 1.4e-20 105.5 124 47.6
Solyc02g094540.4 Solanum lycopersicum HOM05D004735 ORTHO05D005243 9.0e-20 102.8 526 22.6
SHI13678 Sapria himalayana HOM05D004735 ORTHO05D005243 5.8e-19 100.1 132 40.2
SEGI_21903 Sequoiadendron giganteum HOM05D004735 ORTHO05D005243 1.3e-15 89.0 138 38.4
BraA10t44508Z Brassica rapa HOM05D000139 ORTHO05D005243 1.1e-14 85.9 399 25.8
Peaxi162Scf00420g00844 Petunia axillaris HOM05D004735 ORTHO05D005243 1.5e-14 85.5 564 21.6
PGSC0003DMG400020237 Solanum tuberosum HOM05D004735 ORTHO05D005243 7.4e-14 83.2 145 33.1
CDE02G4423 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 1.6e-13 82.0 97 41.2
CSS0011678 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 2.2e-13 81.6 143 39.2
CSS0009912 Camellia sinensis var. sinensis HOM05D004735 ORTHO05D005243 6.3e-13 80.1 94 45.7
CDE02G2610 Ceratophyllum demersum HOM05D004735 ORTHO05D005243 1.3e-10 72.4 100 35.0
Psat7g164720 Pisum sativum HOM05D000121 ORTHO05D000102 8.5e-10 69.7 89 40.4
TPR.G28482 Trifolium pratense HOM05D004735 ORTHO05D005243 2.5e-09 68.2 83 43.4
BolC2t06598H Brassica oleracea HOM05D000139 ORTHO05D000103 5.5e-09 67.0 65 49.2
C02p06510 Brassica napus HOM05D000139 ORTHO05D000103 2.1e-08 65.1 65 47.7
SMO112G0099 Selaginella moellendorffii HOM05D004735 ORTHO05D005243 3.3e-06 57.8 93 36.6
SMO364G0040 Selaginella moellendorffii HOM05D004735 ORTHO05D005243 4.3e-06 57.4 93 35.5


User provided reference genes

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