Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 3.7e-168 594.7 285 100.0
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 4.0e-106 388.7 277 63.9
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 3.4e-105 385.6 275 64.4
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 1.5e-100 370.2 276 61.6
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 1.2e-94 350.5 281 58.0
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 1.6e-94 350.1 281 57.3
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 5.0e-93 345.1 273 59.0
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 5.6e-92 341.7 275 57.8
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.6e-91 340.1 273 57.9
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 1.1e-90 337.4 269 57.6
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.4e-90 337.0 283 55.5
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 1.5e-89 333.6 283 54.1
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 2.0e-89 333.2 279 56.3
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 5.8e-89 331.6 275 55.3
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 6.4e-88 328.2 278 55.4
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 1.9e-87 326.6 275 56.4
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 1.9e-87 326.6 281 54.1
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 2.4e-87 326.2 275 54.9
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 2.7e-86 322.8 263 56.3
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 6.0e-86 321.6 272 55.1
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 1.0e-85 320.9 273 54.6
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 1.0e-85 320.9 273 54.9
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 1.3e-85 320.5 275 54.9
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 1.7e-85 320.1 276 54.0
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 1.1e-84 317.4 275 55.3
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 1.5e-84 317.0 272 52.2
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.9e-84 316.6 274 52.2
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 2.5e-84 316.2 270 54.4
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 9.5e-84 314.3 272 52.9
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 2.1e-83 313.2 282 52.8
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 2.8e-83 312.8 278 51.4
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 4.7e-83 312.0 269 54.6
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 1.1e-82 310.8 274 52.2
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 1.4e-82 310.5 274 54.0
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 1.8e-82 310.1 273 53.5
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 2.4e-82 309.7 276 52.2
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 2.4e-82 309.7 273 53.1
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 6.8e-82 308.1 275 53.8
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 6.8e-82 308.1 273 54.2
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 1.5e-81 307.0 274 52.9
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 2.0e-81 306.6 296 50.3
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 2.0e-81 306.6 273 54.6
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 2.0e-81 306.6 267 54.3
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 2.6e-81 306.2 267 54.3
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 3.4e-81 305.8 274 53.3
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 4.4e-81 305.4 273 51.3
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 5.8e-81 305.1 273 51.3
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 5.8e-81 305.1 273 51.3
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 2.9e-80 302.8 267 53.9
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 8.4e-80 301.2 226 59.3
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 1.4e-79 300.4 272 52.2
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 2.1e-78 296.6 270 49.6
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 4.6e-78 295.4 282 52.5
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 6.0e-78 295.0 280 50.7
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 6.0e-78 295.0 275 51.3
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 1.7e-77 293.5 278 51.4
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 8.7e-77 291.2 223 59.6
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 3.3e-76 289.3 270 49.3
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 1.6e-75 287.0 285 49.8
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 3.6e-75 285.8 287 50.5
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 5.3e-74 282.0 220 55.9
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 2.2e-72 276.6 305 47.9
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 9.3e-71 271.2 277 48.0
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 2.3e-69 266.5 316 45.3
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 2.3e-69 266.5 272 49.3
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 5.1e-69 265.4 272 47.8
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 1.1e-68 264.2 231 54.1
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 3.3e-68 262.7 268 48.1
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 4.8e-67 258.8 272 47.4
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 2.4e-66 256.5 254 48.8
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 2.4e-66 256.5 268 47.4
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 6.9e-66 255.0 232 53.4
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 5.8e-65 251.9 172 67.4
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 6.0e-62 241.9 182 64.3
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 7.9e-62 241.5 188 58.5
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 1.3e-61 240.7 266 45.1
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 6.7e-61 238.4 231 48.5
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 1.5e-60 237.3 274 42.0
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.7e-56 223.8 327 38.2
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 4.6e-54 215.7 173 59.5
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 1.8e-53 213.8 163 63.2
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 1.5e-52 210.7 275 37.5
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 2.8e-51 206.5 183 53.0
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 3.7e-51 206.1 252 40.9
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 4.5e-49 199.1 186 50.5
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 2.2e-48 196.8 277 38.3
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 2.7e-46 189.9 268 38.1
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 4.3e-44 182.6 294 34.0
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 6.3e-43 178.7 276 38.4
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.1e-42 176.4 133 60.2
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 2.2e-35 153.7 166 49.4
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 3.1e-34 149.8 142 50.7
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 2.6e-33 146.7 149 49.0
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 2.2e-32 143.7 135 48.9
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 2.9e-32 143.3 309 30.4
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 1.5e-25 120.9 86 60.5
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 3.6e-22 109.8 81 63.0
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 6.3e-19 99.0 167 34.7
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.7e-11 74.3 229 25.3
AUR62037021 Chenopodium quinoa HOM05D005118 ORTHO05D006038 1.7e-11 74.3 229 25.8
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 4.8e-11 72.8 99 40.4
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 6.3e-11 72.4 111 36.9
Sc02g0000340 Simmondsia chinensis HOM05D005118 ORTHO05D006038 2.9e-08 63.5 246 22.4
DCAR_013399 Daucus carota HOM05D005118 ORTHO05D006038 3.8e-08 63.2 250 24.4
EL10Ac7g16902 Beta vulgaris HOM05D001354 ORTHO05D007486 5.0e-08 62.8 235 23.8
Lsat_1_v5_gn_9_20681 Lactuca sativa HOM05D005118 ORTHO05D006038 5.0e-08 62.8 217 24.4
Lj6g0000477 Lotus japonicus HOM05D007318 ORTHO05D009289 1.1e-07 61.6 73 42.5
Oeu017686.1 Olea europaea HOM05D005118 ORTHO05D006038 1.5e-07 61.2 187 26.2
ClCG08G004490 Citrullus lanatus HOM05D005118 ORTHO05D006038 1.9e-07 60.8 180 25.6
Dinv21195 Davidia involucrata HOM05D005118 ORTHO05D006038 2.5e-07 60.5 203 26.6
Migut.J01020 Erythranthe guttata HOM05D005118 ORTHO05D006038 2.5e-07 60.5 231 24.2
MELO3C011647.2 Cucumis melo HOM05D005118 ORTHO05D006038 3.2e-07 60.1 158 26.6
Thhalv10018973m.g Eutrema salsugineum HOM05D005118 ORTHO05D006038 3.2e-07 60.1 216 25.5
Sed0011362 Sechium edule HOM05D005118 ORTHO05D006038 3.2e-07 60.1 177 25.4
Atru.chr8.1478 Acer truncatum HOM05D005118 ORTHO05D006038 4.2e-07 59.7 225 26.7
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 5.5e-07 59.3 39 59.0
CsaV3_6G003860 Cucumis sativus L. HOM05D005118 ORTHO05D006038 1.6e-06 57.8 158 26.6
ECA247G3083 Erigeron canadensis HOM05D005118 ORTHO05D006038 1.6e-06 57.8 178 28.1
CANSAT64G1535 Cannabis sativa HOM05D005118 ORTHO05D006038 2.1e-06 57.4 160 26.2
Lj2C139G10 Lonicera japonica HOM05D005118 ORTHO05D006038 2.1e-06 57.4 192 24.5
TAR365G0960 Trochodendron aralioides HOM05D005118 ORTHO05D006038 2.7e-06 57.0 256 23.8
ClCG05G021770 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.6e-06 56.6 38 63.2
Phvul.007G152100 Phaseolus vulgaris HOM05D005118 ORTHO05D006038 4.7e-06 56.2 209 23.4
Aa31LG3G4790 Aethionema arabicum HOM05D005118 ORTHO05D006038 6.1e-06 55.8 196 25.5
FvH4_6g19140 Fragaria vesca HOM05D005118 ORTHO05D006038 6.1e-06 55.8 231 23.8
Nn2g14484 Nelumbo nucifera HOM05D005118 ORTHO05D006038 6.1e-06 55.8 271 22.5
Aa31LG3G4830 Aethionema arabicum HOM05D005118 ORTHO05D006038 8.0e-06 55.5 142 26.8
FAN14G1754 Fragaria x ananassa HOM05D005118 ORTHO05D006038 8.0e-06 55.5 231 24.2


User provided reference genes

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