Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 5.8e-74 280.8 142 100.0
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 5.1e-54 214.5 141 74.5
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 1.9e-53 212.6 146 74.0
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 5.7e-53 211.1 142 74.6
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 7.4e-53 210.7 142 76.1
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 7.4e-53 210.7 145 71.7
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 1.6e-52 209.5 125 79.2
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 1.6e-52 209.5 118 80.5
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 1.6e-52 209.5 125 79.2
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 2.2e-52 209.1 142 74.6
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 2.2e-52 209.1 136 73.5
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 2.8e-52 208.8 133 75.9
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 3.7e-52 208.4 118 79.7
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 3.7e-52 208.4 118 79.7
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 3.7e-52 208.4 115 83.5
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 3.7e-52 208.4 140 70.7
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 4.8e-52 208.0 140 72.9
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.8e-52 208.0 142 73.2
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 4.8e-52 208.0 126 78.6
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 6.3e-52 207.6 140 72.9
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 1.1e-51 206.8 141 70.9
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 1.4e-51 206.5 118 79.7
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 1.4e-51 206.5 118 79.7
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 1.4e-51 206.5 118 79.7
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 1.4e-51 206.5 118 79.7
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 1.4e-51 206.5 118 79.7
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 1.4e-51 206.5 118 79.7
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 1.4e-51 206.5 147 72.1
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 1.8e-51 206.1 124 76.6
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 1.8e-51 206.1 138 73.9
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 1.8e-51 206.1 138 73.9
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 2.4e-51 205.7 119 78.2
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 2.4e-51 205.7 118 78.8
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 2.4e-51 205.7 145 71.7
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 2.4e-51 205.7 140 74.3
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 3.1e-51 205.3 118 78.8
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 3.1e-51 205.3 118 78.8
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.1e-51 205.3 138 71.0
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 4.1e-51 204.9 118 78.8
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 5.3e-51 204.5 136 75.0
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 5.3e-51 204.5 141 69.5
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 5.3e-51 204.5 138 73.2
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 6.9e-51 204.1 115 80.0
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 6.9e-51 204.1 140 71.4
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 9.1e-51 203.8 114 81.6
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 9.1e-51 203.8 124 76.6
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 9.1e-51 203.8 143 70.6
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.2e-50 203.4 138 70.3
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 1.5e-50 203.0 145 69.7
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.0e-50 202.6 141 73.8
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 2.6e-50 202.2 144 71.5
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 4.5e-50 201.4 144 71.5
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 4.5e-50 201.4 134 73.9
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 5.9e-50 201.1 135 74.1
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 5.9e-50 201.1 125 76.0
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 5.9e-50 201.1 143 71.3
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 5.9e-50 201.1 126 79.4
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 7.7e-50 200.7 144 68.1
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 1.0e-49 200.3 116 83.6
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 1.0e-49 200.3 120 78.3
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 1.0e-49 200.3 141 70.2
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.0e-49 200.3 141 70.2
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 1.3e-49 199.9 125 76.0
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 2.9e-49 198.7 124 76.6
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 2.9e-49 198.7 126 76.2
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 2.9e-49 198.7 144 70.1
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 3.8e-49 198.4 119 77.3
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 6.5e-49 197.6 143 71.3
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 6.5e-49 197.6 140 67.1
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 8.5e-49 197.2 141 68.8
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 1.1e-48 196.8 135 72.6
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 1.1e-48 196.8 116 77.6
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 1.1e-48 196.8 141 69.5
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 1.4e-48 196.4 146 69.2
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 1.4e-48 196.4 143 67.8
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 1.4e-48 196.4 144 68.8
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 3.2e-48 195.3 118 77.1
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 4.2e-48 194.9 144 68.8
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 7.2e-48 194.1 142 69.7
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 9.4e-48 193.7 135 71.1
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 9.4e-48 193.7 143 68.5
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.2e-47 193.4 141 66.7
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 1.2e-47 193.4 142 68.3
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.2e-47 193.4 144 68.1
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 1.6e-47 193.0 140 67.9
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 3.6e-47 191.8 137 70.1
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 3.6e-47 191.8 140 67.9
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 4.6e-47 191.4 143 69.9
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.9e-47 190.7 128 73.4
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 1.0e-46 190.3 142 66.9
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 1.0e-46 190.3 142 68.3
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 1.4e-46 189.9 144 68.1
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 1.4e-46 189.9 136 69.1
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 1.4e-46 189.9 144 66.7
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 1.8e-46 189.5 134 70.9
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.0e-46 188.7 142 68.3
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 3.9e-46 188.3 142 67.6
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 2.6e-45 185.7 142 67.6
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 9.7e-45 183.7 142 67.6
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 9.7e-45 183.7 122 70.5
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 2.8e-44 182.2 113 74.3
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.8e-43 179.5 142 66.9
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 3.1e-43 178.7 145 66.2
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 6.9e-43 177.6 145 62.8
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 4.5e-42 174.9 146 65.1
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 8.5e-41 170.6 96 81.2
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 5.2e-38 161.4 90 82.2
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 1.5e-37 159.8 142 57.7
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.6e-37 159.1 144 58.3
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.6e-37 159.1 145 56.6
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 2.6e-37 159.1 139 61.2
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 5.7e-37 157.9 86 81.4
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 7.4e-37 157.5 95 80.0
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 5.3e-35 151.4 84 81.0
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 2.6e-34 149.1 117 63.2
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 2.6e-34 149.1 112 67.9
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 7.7e-34 147.5 89 80.9
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 1.1e-32 143.7 117 67.5
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 4.2e-32 141.7 89 76.4
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 6.1e-31 137.9 117 60.7
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 5.7e-29 131.3 120 60.0
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 3.7e-28 128.6 114 60.5
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 5.9e-26 121.3 122 59.0
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 3.2e-24 115.5 112 58.0
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.2e-23 113.6 141 48.2
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.6e-23 113.2 126 50.0
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 5.7e-21 104.8 66 74.2
Manes.11G164551 Manihot esculenta HOM05D005659 ORTHO05D007059 4.2e-16 88.6 82 61.0
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 6.1e-15 84.7 144 38.2
Nitab4.5_0003068g0060 Nicotiana tabacum HOM05D005659 ORTHO05D007059 1.2e-10 70.5 79 54.4
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.7e-09 66.6 139 34.5
Gohir.A07G111250 Gossypium hirsutum HOM05D005659 ORTHO05D007059 3.3e-08 62.4 64 53.1
MD11G1234000 Malus domestica HOM05D005659 ORTHO05D007059 7.3e-08 61.2 53 60.4


User provided reference genes

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