Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 5.2e-99 364.4 186 100.0
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.8e-62 243.0 154 83.1
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 8.8e-62 240.7 195 68.2
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 2.0e-61 239.6 195 70.8
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 2.5e-61 239.2 191 71.2
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 5.7e-61 238.0 192 70.3
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 4.8e-60 235.0 195 67.2
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 6.3e-60 234.6 152 80.3
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 1.1e-59 233.8 198 67.2
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 1.1e-59 233.8 155 80.0
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 1.1e-59 233.8 184 66.8
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 2.4e-59 232.6 186 67.2
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 2.4e-59 232.6 144 84.0
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 5.3e-59 231.5 155 78.7
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 6.9e-59 231.1 181 68.5
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 9.1e-59 230.7 194 69.1
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 2.0e-58 229.6 153 77.1
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 2.6e-58 229.2 158 80.4
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 2.6e-58 229.2 187 65.2
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 4.5e-58 228.4 168 72.6
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.9e-58 228.0 155 78.7
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 7.7e-58 227.6 155 78.7
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 1.0e-57 227.3 155 78.7
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 1.0e-57 227.3 155 78.7
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.3e-57 226.9 150 79.3
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.7e-57 226.5 156 76.9
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 2.2e-57 226.1 151 79.5
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 2.2e-57 226.1 149 78.5
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 2.9e-57 225.7 155 78.1
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 2.9e-57 225.7 149 79.9
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 2.9e-57 225.7 161 73.9
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 2.9e-57 225.7 149 79.2
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 3.8e-57 225.3 156 76.9
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 3.8e-57 225.3 156 76.9
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 6.5e-57 224.6 150 80.0
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 8.5e-57 224.2 155 77.4
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 8.5e-57 224.2 159 76.7
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 1.1e-56 223.8 161 73.9
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 1.1e-56 223.8 154 75.3
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 1.4e-56 223.4 154 75.3
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.4e-56 223.4 156 74.4
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 3.2e-56 222.2 152 78.3
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 4.2e-56 221.9 152 77.6
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 4.2e-56 221.9 156 75.0
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 4.2e-56 221.9 156 75.0
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 4.2e-56 221.9 186 67.7
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 5.5e-56 221.5 152 78.3
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 5.5e-56 221.5 145 77.9
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 7.2e-56 221.1 153 75.8
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 7.2e-56 221.1 153 75.8
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 7.2e-56 221.1 158 74.1
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 9.4e-56 220.7 152 78.3
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 9.4e-56 220.7 157 74.5
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 9.4e-56 220.7 157 74.5
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 9.4e-56 220.7 157 74.5
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.6e-55 219.9 187 64.2
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 2.1e-55 219.5 153 77.1
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 2.1e-55 219.5 150 78.7
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 2.1e-55 219.5 153 75.2
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 2.1e-55 219.5 157 73.9
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 2.1e-55 219.5 154 73.4
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 2.7e-55 219.2 151 76.2
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 4.7e-55 218.4 156 74.4
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 4.7e-55 218.4 205 61.5
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 1.0e-54 217.2 149 77.9
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 1.4e-54 216.9 151 74.8
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.4e-54 216.9 148 75.0
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.8e-54 216.5 158 73.4
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 2.3e-54 216.1 190 63.7
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 2.3e-54 216.1 188 64.9
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 2.3e-54 216.1 153 73.2
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 2.3e-54 216.1 190 63.7
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 3.0e-54 215.7 197 62.9
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 3.0e-54 215.7 162 72.2
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 3.0e-54 215.7 189 64.0
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 3.9e-54 215.3 206 60.2
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 5.1e-54 214.9 200 61.0
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 6.7e-54 214.5 152 73.7
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 6.7e-54 214.5 202 61.9
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 8.8e-54 214.2 163 70.6
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 8.8e-54 214.2 149 77.2
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 8.8e-54 214.2 156 74.4
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 8.8e-54 214.2 143 79.0
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 1.5e-53 213.4 152 73.0
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 1.5e-53 213.4 152 73.0
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.0e-53 213.0 202 61.9
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 3.3e-53 212.2 157 71.3
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 3.3e-53 212.2 157 71.3
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 9.7e-53 210.7 163 68.7
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 9.7e-53 210.7 154 73.4
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.7e-52 209.9 152 74.3
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 1.7e-52 209.9 130 82.3
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 4.8e-52 208.4 165 69.7
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 4.8e-52 208.4 154 72.1
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 4.8e-52 208.4 157 70.7
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 1.8e-51 206.5 147 75.5
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 2.4e-51 206.1 147 75.5
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 7.0e-51 204.5 146 74.7
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 1.0e-49 200.7 146 72.6
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 6.5e-49 198.0 154 68.2
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 8.8e-46 187.6 156 66.7
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.1e-45 187.2 148 66.9
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 1.1e-45 187.2 155 69.0
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 4.4e-45 185.3 140 68.6
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 9.7e-45 184.1 124 76.6
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 2.2e-44 183.0 101 91.1
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 3.7e-44 182.2 146 63.0
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 1.1e-43 180.6 147 65.3
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 2.4e-43 179.5 101 91.1
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 7.0e-43 177.9 155 60.0
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 1.6e-42 176.8 120 80.0
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 2.2e-41 172.9 106 83.0
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 8.8e-38 161.0 170 50.6
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 5.7e-37 158.3 95 85.3
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 2.4e-35 152.9 130 58.5
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 3.8e-33 145.6 128 61.7
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 1.6e-31 140.2 138 54.3
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.1e-31 138.3 87 85.1
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 1.0e-30 137.5 190 47.9
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.4e-30 137.1 87 85.1
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.3e-30 136.3 87 83.9
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 1.2e-29 134.0 111 65.8
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 2.9e-25 119.4 92 70.7
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 1.6e-23 113.6 86 69.8
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.4e-22 110.5 128 57.0
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 6.3e-20 101.7 82 67.1
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 9.2e-19 97.8 98 58.2
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 3.9e-17 92.4 137 43.1
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 3.6e-07 59.3 105 35.2


User provided reference genes

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