Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1439 Utricularia gibba HOM05D000855 ORTHO05D008469 4.2e-226 787.7 403 100.0
unitig_26.g8803 Utricularia gibba HOM05D000855 ORTHO05D008469 2.6e-50 203.8 248 48.8
MSTRG.11459 Avicennia marina HOM05D000855 ORTHO05D008469 3.0e-35 153.7 265 38.9
SalBow5G4620 Salvia bowleyana HOM05D000855 ORTHO05D008469 3.9e-30 136.7 242 38.8
Oeu016391.2 Olea europaea HOM05D000855 ORTHO05D008469 1.1e-27 128.6 278 35.6
SGA_v2.0_scaffold90G27907 Striga asiatica HOM05D000855 ORTHO05D008469 3.4e-26 123.6 167 41.9
SGA_v2.0_scaffold25G10839 Striga asiatica HOM05D000855 ORTHO05D008469 1.1e-24 118.6 197 36.0
Duzib106G2025 Durio zibethinus HOM05D000855 ORTHO05D008469 9.2e-24 115.5 318 30.5
Rhsim08G0172900 Rhododendron simsii HOM05D000855 ORTHO05D008469 8.6e-22 109.0 283 34.3
Sabra12G0058300 Salix brachista HOM05D000855 ORTHO05D008469 2.5e-21 107.5 282 33.3
Thecc.10G121100 Theobroma cacao HOM05D000855 ORTHO05D008469 1.2e-20 105.1 217 35.9
Gorai.N007400 Gossypium raimondii HOM05D000855 ORTHO05D008469 1.6e-20 104.8 149 40.9
Gohir.A06G170100 Gossypium hirsutum HOM05D000855 ORTHO05D008469 2.8e-20 104.0 150 42.0
Gohir.D06G177900 Gossypium hirsutum HOM05D000855 ORTHO05D008469 3.6e-20 103.6 149 40.9
Sopen06g027780 Solanum pennellii HOM05D000855 ORTHO05D008469 3.6e-20 103.6 266 31.6
Solyc06g071490.3 Solanum lycopersicum HOM05D000855 ORTHO05D008469 4.7e-20 103.2 266 31.6
Atru.chr9.2483 Acer truncatum HOM05D000855 ORTHO05D008469 8.1e-20 102.4 229 33.2
Potri.012G081500 Populus trichocarpa HOM05D000855 ORTHO05D008469 1.4e-19 101.7 243 33.7
COL.COLO4_21664 Corchorus olitorius HOM05D000855 ORTHO05D008469 1.8e-19 101.3 206 36.9
Prupe.5G172900 Prunus persica HOM05D000855 ORTHO05D008469 5.2e-19 99.8 251 33.1
PGSC0003DMG400026995 Solanum tuberosum HOM05D000855 ORTHO05D008469 6.8e-19 99.4 251 31.9
CANSAT80G1757 Cannabis sativa HOM05D000855 ORTHO05D008469 1.5e-18 98.2 164 37.2
GSVIVG01007736001 Vitis vinifera HOM05D000855 ORTHO05D008469 1.5e-18 98.2 169 40.2
CSS0039177 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 2.0e-18 97.8 164 36.6
Manes.14G065400 Manihot esculenta HOM05D000855 ORTHO05D008469 2.6e-18 97.4 334 27.8
CSS0004279 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 3.4e-18 97.1 164 37.8
Migut.I00004 Erythranthe guttata HOM05D000855 ORTHO05D008469 3.4e-18 97.1 302 31.8
Eucgr.B00304 Eucalyptus grandis HOM05D000855 ORTHO05D008469 7.5e-18 95.9 288 31.6
Psat5g106400 Pisum sativum HOM05D000855 ORTHO05D008469 7.5e-18 95.9 158 36.7
Cfa019138 Carpinus fangiana HOM05D000855 ORTHO05D008469 1.7e-17 94.7 258 30.2
FAN25G0827 Fragaria x ananassa HOM05D000855 ORTHO05D008469 2.2e-17 94.4 230 36.5
FAN16G3561 Fragaria x ananassa HOM05D000855 ORTHO05D008469 2.9e-17 94.0 230 36.1
Manes.06G105300 Manihot esculenta HOM05D000855 ORTHO05D008469 2.9e-17 94.0 152 36.8
MD14G1179900 Malus domestica HOM05D000855 ORTHO05D008469 3.7e-17 93.6 249 32.9
FAN21G0403 Fragaria x ananassa HOM05D000855 ORTHO05D008469 4.9e-17 93.2 236 35.2
Actinidia19324 Actinidia chinensis HOM05D000855 ORTHO05D008469 6.4e-17 92.8 178 36.5
FAN11G2252 Fragaria x ananassa HOM05D000855 ORTHO05D008469 6.4e-17 92.8 230 36.1
Peaxi162Scf00689g10024 Petunia axillaris HOM05D000855 ORTHO05D008469 6.4e-17 92.8 227 31.7
DCAR_031321 Daucus carota HOM05D000855 ORTHO05D008469 8.3e-17 92.4 263 31.6
Haze_07505 Corylus avellana HOM05D000855 ORTHO05D008469 1.9e-16 91.3 257 31.1
FvH4_3g28680 Fragaria vesca HOM05D000855 ORTHO05D008469 2.4e-16 90.9 215 36.3
MD06G1173400 Malus domestica HOM05D000855 ORTHO05D008469 3.2e-16 90.5 250 31.2
RcHm_v2.0_Chr7g0223481 Rosa chinensis HOM05D000855 ORTHO05D008469 3.2e-16 90.5 211 34.1
TWI23G1303 Tripterygium wilfordii HOM05D000855 ORTHO05D008469 3.2e-16 90.5 328 28.0
CAN.G628.82 Capsicum annuum HOM05D000855 ORTHO05D008469 5.4e-16 89.7 229 31.0
BcaB01g00839 Brassica carinata HOM05D000855 ORTHO05D008469 7.1e-16 89.4 303 27.4
Dinv20648 Davidia involucrata HOM05D000855 ORTHO05D008469 7.1e-16 89.4 180 35.6
Nitab4.5_0000003g0610 Nicotiana tabacum HOM05D000855 ORTHO05D008469 7.1e-16 89.4 245 29.8
RcHm_v2.0_Chr7g0223491 Rosa chinensis HOM05D000855 ORTHO05D008469 9.2e-16 89.0 233 34.8
Hma1.2p1_0176F.1_g077366 Hydrangea macrophylla HOM05D000855 ORTHO05D008469 1.2e-15 88.6 244 32.4
Sed0024227 Sechium edule HOM05D000855 ORTHO05D008469 1.2e-15 88.6 260 29.2
Ca_16318_v3 Cicer arietinum L. HOM05D000855 ORTHO05D008469 1.6e-15 88.2 163 36.8
Nn4g22754 Nelumbo nucifera HOM05D000855 ORTHO05D001716 1.6e-15 88.2 174 35.1
QL10p011511 Quercus lobata HOM05D000855 ORTHO05D008469 1.6e-15 88.2 168 36.3
Cpa.g.c30444 Carica papaya HOM05D000855 ORTHO05D008469 3.5e-15 87.0 370 26.8
CiPaw.12G026700 Carya illinoinensis HOM05D000855 ORTHO05D008469 1.0e-14 85.5 300 28.0
CsaV3_1G008500 Cucumis sativus L. HOM05D000855 ORTHO05D008469 1.7e-14 84.7 170 35.3
Nitab4.5_0004210g0020 Nicotiana tabacum HOM05D000855 ORTHO05D008469 1.7e-14 84.7 169 34.3
TWI14G0012 Tripterygium wilfordii HOM05D000855 ORTHO05D008469 3.0e-14 84.0 154 35.1
ClCG01G013160 Citrullus lanatus HOM05D000855 ORTHO05D008469 5.1e-14 83.2 161 34.2
Ciclev10018990m.g Citrus clementina HOM05D000855 ORTHO05D008469 5.1e-14 83.2 209 34.0
TAR371G0869 Trochodendron aralioides HOM05D000855 ORTHO05D001716 5.1e-14 83.2 162 35.2
Sed0010009 Sechium edule HOM05D000855 ORTHO05D008469 6.6e-14 82.8 333 25.8
Aqoxy3G02940 Aquilegia oxysepala HOM05D000855 ORTHO05D008469 1.1e-13 82.0 185 33.5
A06p19510 Brassica napus HOM05D000855 ORTHO05D008469 1.5e-13 81.6 310 28.1
BraA06t25030Z Brassica rapa HOM05D000855 ORTHO05D008469 1.5e-13 81.6 310 28.1
MELO3C002265.2 Cucumis melo HOM05D000855 ORTHO05D008469 1.9e-13 81.3 163 34.4
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 4.3e-13 80.1 221 31.2
BcaC07g39301 Brassica carinata HOM05D000855 ORTHO05D008469 4.3e-13 80.1 336 29.2
TAR374G0945 Trochodendron aralioides HOM05D000855 ORTHO05D008469 5.6e-13 79.7 234 29.1
C08p23150 Brassica napus HOM05D000855 ORTHO05D008469 7.3e-13 79.3 208 31.7
Lj9C448T5 Lonicera japonica HOM05D000855 ORTHO05D008469 1.2e-12 78.6 260 28.8
AL5G27520 Arabidopsis lyrata HOM05D000855 ORTHO05D008469 1.6e-12 78.2 328 26.8
BolC8t49949H Brassica oleracea HOM05D000855 ORTHO05D008469 2.8e-12 77.4 208 31.2
Sabra15G0102000 Salix brachista HOM05D002152 ORTHO05D002737 2.8e-12 77.4 134 37.3
BcaB02g10667 Brassica carinata HOM05D000855 ORTHO05D008469 4.7e-12 76.6 268 29.1
THA.LOC104821475 Tarenaya hassleriana HOM05D000855 ORTHO05D008469 6.2e-12 76.3 199 31.2
HanXRQChr05g0156261 Helianthus annuus HOM05D000855 ORTHO05D008469 8.1e-12 75.9 153 32.7
Lj5C125T4 Lonicera japonica HOM05D000855 ORTHO05D008469 1.1e-11 75.5 244 30.3
Sp5g13850 Schrenkiella parvula HOM05D000855 ORTHO05D008469 1.1e-11 75.5 229 30.1
Carub.0005s1430 Capsella rubella HOM05D000855 ORTHO05D008469 1.4e-11 75.1 229 29.7
AT3G48187 Arabidopsis thaliana HOM05D000855 ORTHO05D008469 2.4e-11 74.3 215 29.3
FvH4_6g50890 Fragaria vesca HOM05D000855 ORTHO05D001716 2.4e-11 74.3 342 24.3
FAN14G0543 Fragaria x ananassa HOM05D000855 ORTHO05D001716 2.4e-11 74.3 342 24.3
Glyma.13G004800 Glycine max HOM05D000855 ORTHO05D008469 1.2e-10 72.0 210 29.0
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 5.8e-10 69.7 206 30.6
TPR.G8286 Trifolium pratense HOM05D000855 ORTHO05D008469 5.8e-10 69.7 233 26.6
CiPaw.04G026000 Carya illinoinensis HOM05D000855 ORTHO05D001716 7.6e-10 69.3 173 30.1
Aqoxy3G01049 Aquilegia oxysepala HOM05D000855 ORTHO05D001716 1.7e-09 68.2 168 32.1
CARHR156910 Cardamine hirsuta HOM05D000855 ORTHO05D008469 1.7e-09 68.2 159 32.1
Lsat_1_v5_gn_5_14721 Lactuca sativa HOM05D000855 ORTHO05D008469 2.2e-09 67.8 162 31.5
Oeu004722.1 Olea europaea HOM05D000855 ORTHO05D001716 2.2e-09 67.8 161 24.8
ECA246G2551 Erigeron canadensis HOM05D000855 ORTHO05D008469 2.9e-09 67.4 152 30.3
Lj6g0003093 Lotus japonicus HOM05D000855 ORTHO05D008469 2.9e-09 67.4 197 28.4
PGR083G1278 Punica granatum HOM05D000855 ORTHO05D008469 2.9e-09 67.4 173 30.1
PGSC0003DMG400000489 Solanum tuberosum HOM05D000855 ORTHO05D001716 3.8e-09 67.0 307 24.4
Glyma.20G064400 Glycine max HOM05D000855 ORTHO05D008469 8.4e-09 65.9 235 26.0
Haze_14689 Corylus avellana HOM05D000855 ORTHO05D001716 1.4e-08 65.1 170 29.4
Lalb_Chr17g0337301 Lupinus albus HOM05D000855 ORTHO05D001716 1.4e-08 65.1 156 30.8
PSO832G0050 Papaver somniferum HOM05D000855 ORTHO05D001716 1.4e-08 65.1 170 31.2
Sopen02g031510 Solanum pennellii HOM05D000855 ORTHO05D001716 1.4e-08 65.1 311 25.4
Thecc.04G011500 Theobroma cacao HOM05D000855 ORTHO05D001716 1.4e-08 65.1 239 24.7
PSO063G7420 Papaver somniferum HOM05D000855 ORTHO05D001716 1.9e-08 64.7 170 32.4
CDE07G0025 Ceratophyllum demersum HOM05D000855 ORTHO05D001716 2.4e-08 64.3 197 29.9
QL02p075970 Quercus lobata HOM05D000855 ORTHO05D001716 2.4e-08 64.3 218 28.0
Cfa007413 Carpinus fangiana HOM05D000855 ORTHO05D001716 5.4e-08 63.2 215 26.5
PGR083G1200 Punica granatum HOM05D000855 ORTHO05D001716 5.4e-08 63.2 157 25.5
CSS0035274 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D008469 7.1e-08 62.8 213 23.9
Nitab4.5_0008510g0010 Nicotiana tabacum HOM05D000855 ORTHO05D001716 1.2e-07 62.0 152 27.0
Oeu062929.2 Olea europaea HOM05D000855 ORTHO05D001716 1.6e-07 61.6 192 27.1
Dinv33478 Davidia involucrata HOM05D000855 ORTHO05D001716 2.1e-07 61.2 175 28.0
Lj7C593G6 Lonicera japonica HOM05D000855 ORTHO05D001716 2.7e-07 60.8 152 24.3
Nitab4.5_0014517g0020 Nicotiana tabacum HOM05D000855 ORTHO05D001716 2.7e-07 60.8 152 27.0
CSS0017800 Camellia sinensis var. sinensis HOM05D000855 ORTHO05D001716 3.5e-07 60.5 213 23.5
CDE06G0236 Ceratophyllum demersum HOM05D000855 ORTHO05D008469 4.6e-07 60.1 315 26.0
Atru.chr6.2318 Acer truncatum HOM05D000855 ORTHO05D001716 6.0e-07 59.7 170 27.6
FAN08G1626 Fragaria x ananassa HOM05D000855 ORTHO05D008469 6.0e-07 59.7 142 31.7
FAN13G1685 Fragaria x ananassa HOM05D000855 ORTHO05D008469 6.0e-07 59.7 142 31.7
Hma1.2p1_0993F.1_g245380 Hydrangea macrophylla HOM05D000855 ORTHO05D001716 6.0e-07 59.7 220 25.9
Actinidia35751 Actinidia chinensis HOM05D000855 ORTHO05D001716 7.8e-07 59.3 180 23.9
AUR62018747 Chenopodium quinoa HOM05D000855 ORTHO05D001716 1.0e-06 58.9 174 24.7
FvH4_5g29880 Fragaria vesca HOM05D000855 ORTHO05D008469 1.3e-06 58.5 142 31.0
FAN04G0669 Fragaria x ananassa HOM05D000855 ORTHO05D008469 1.3e-06 58.5 142 31.0
FAN18G4278 Fragaria x ananassa HOM05D000855 ORTHO05D008469 1.3e-06 58.5 142 31.0
MBI10_g28018_MAGBIO Magnolia biondii HOM05D000855 ORTHO05D001716 1.7e-06 58.2 239 27.2
Medtr3g081560 Medicago truncatula HOM05D000855 ORTHO05D008469 1.7e-06 58.2 256 27.0
GSVIVG01032455001 Vitis vinifera HOM05D000855 ORTHO05D001716 1.7e-06 58.2 82 39.0
Ciclev10014124m.g Citrus clementina HOM05D000855 ORTHO05D001716 2.3e-06 57.8 176 27.3
Phvul.006G003000 Phaseolus vulgaris HOM05D000855 ORTHO05D008469 3.0e-06 57.4 82 42.7
Peaxi162Scf00129g01229 Petunia axillaris HOM05D000855 ORTHO05D001716 3.9e-06 57.0 182 23.6
Eucgr.I01513 Eucalyptus grandis HOM05D000855 ORTHO05D001716 6.6e-06 56.2 197 21.8


User provided reference genes

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