Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 3.7e-123 444.9 226 100.0
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 4.0e-61 238.8 251 55.0
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 6.0e-57 224.9 250 52.8
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 1.8e-56 223.4 244 54.1
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 8.7e-56 221.1 251 51.4
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 6.9e-53 211.5 255 48.2
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 9.0e-53 211.1 251 48.6
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.2e-52 210.7 255 48.2
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 2.0e-52 209.9 255 48.2
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 2.6e-52 209.5 252 48.8
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 2.6e-52 209.5 244 50.4
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 2.6e-52 209.5 252 48.4
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 3.4e-52 209.1 254 49.2
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 1.0e-51 207.6 251 51.0
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 2.2e-51 206.5 242 50.8
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 2.2e-51 206.5 252 49.6
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 2.2e-51 206.5 248 48.4
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 2.2e-51 206.5 257 46.7
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 2.9e-51 206.1 256 48.0
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 2.9e-51 206.1 256 48.0
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 2.9e-51 206.1 254 47.2
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 5.0e-51 205.3 252 48.4
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 6.5e-51 204.9 250 50.8
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 1.4e-50 203.8 253 48.2
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 1.9e-50 203.4 259 46.3
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 2.5e-50 203.0 263 47.1
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 5.5e-50 201.8 250 47.6
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 5.5e-50 201.8 249 45.8
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 5.5e-50 201.8 244 48.8
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 7.2e-50 201.4 253 48.6
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 7.2e-50 201.4 248 47.6
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 1.6e-49 200.3 254 46.1
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 2.7e-49 199.5 249 47.4
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.6e-49 198.7 250 49.6
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.6e-49 198.7 250 49.6
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 4.6e-49 198.7 249 48.6
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 1.8e-48 196.8 250 48.8
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 2.3e-48 196.4 250 45.2
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 2.3e-48 196.4 258 47.7
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 3.9e-48 195.7 249 47.8
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 3.9e-48 195.7 249 47.8
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 5.1e-48 195.3 248 46.4
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 5.1e-48 195.3 250 48.0
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 5.1e-48 195.3 249 45.4
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 8.7e-48 194.5 255 46.7
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.1e-47 194.1 254 46.9
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.5e-47 193.7 249 47.4
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 2.5e-47 193.0 246 45.5
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 2.5e-47 193.0 254 45.7
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 4.3e-47 192.2 254 46.1
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 5.7e-47 191.8 248 45.6
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 9.7e-47 191.0 248 45.2
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 1.6e-46 190.3 249 44.6
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 2.2e-46 189.9 242 44.6
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 2.2e-46 189.9 252 46.0
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 4.8e-46 188.7 234 48.3
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 4.8e-46 188.7 254 44.5
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 6.3e-46 188.3 264 47.0
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 6.3e-46 188.3 249 44.2
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.1e-45 187.6 244 45.5
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 1.1e-45 187.6 251 46.6
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 1.8e-45 186.8 254 46.9
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 1.8e-45 186.8 250 45.6
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 3.1e-45 186.0 256 45.3
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 5.3e-45 185.3 242 45.0
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 9.0e-45 184.5 246 44.7
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 9.0e-45 184.5 254 45.3
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 1.5e-44 183.7 258 44.2
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 2.6e-44 183.0 250 45.2
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 3.4e-44 182.6 250 45.2
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 1.3e-43 180.6 242 44.6
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 1.7e-43 180.3 253 43.1
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 6.5e-43 178.3 225 45.3
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 4.2e-42 175.6 245 44.5
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 5.5e-42 175.3 234 44.9
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 5.5e-42 175.3 252 44.0
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 7.2e-42 174.9 254 42.5
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 9.4e-42 174.5 243 44.9
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 1.2e-41 174.1 231 43.7
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 1.2e-41 174.1 268 41.4
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.6e-41 173.7 251 43.0
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 2.1e-41 173.3 252 42.9
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 2.1e-41 173.3 254 41.7
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 3.6e-41 172.6 251 42.2
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 3.6e-41 172.6 243 43.2
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 4.6e-41 172.2 232 44.8
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 4.6e-41 172.2 254 42.5
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 7.9e-41 171.4 232 45.3
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 7.9e-41 171.4 232 45.3
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 7.9e-41 171.4 232 45.3
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 7.9e-41 171.4 232 45.3
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 7.9e-41 171.4 236 43.2
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.8e-40 170.2 248 44.0
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 1.8e-40 170.2 216 45.4
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.3e-40 169.9 251 41.0
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 2.3e-40 169.9 254 41.3
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 2.3e-40 169.9 228 45.2
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 3.0e-40 169.5 249 42.2
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.0e-40 169.5 216 44.9
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.9e-40 169.1 213 45.5
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 5.1e-40 168.7 241 42.7
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 6.7e-40 168.3 232 44.4
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 8.8e-40 167.9 250 42.4
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 2.0e-39 166.8 242 39.7
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 7.4e-39 164.9 206 44.7
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 1.7e-38 163.7 244 39.3
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 6.3e-38 161.8 244 38.9
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 6.3e-38 161.8 168 51.2
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.4e-37 160.6 213 44.6
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 5.3e-37 158.7 238 39.5
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 5.3e-37 158.7 238 39.5
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 1.9e-34 150.2 137 53.3
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 1.6e-33 147.1 205 44.4
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 2.1e-33 146.7 205 44.4
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 4.7e-33 145.6 240 39.2
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 3.0e-32 142.9 137 51.8
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 8.8e-32 141.4 173 49.1
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 5.7e-31 138.7 180 43.3
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 8.2e-30 134.8 260 34.6
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 3.1e-29 132.9 237 38.8
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 9.1e-29 131.3 121 53.7
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 9.1e-29 131.3 241 39.0
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 1.2e-28 131.0 273 34.4
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 2.9e-27 126.3 169 40.8
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 3.2e-26 122.9 271 32.5
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 2.1e-17 93.6 159 36.5
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 3.0e-16 89.7 229 31.9
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 8.3e-14 81.6 131 35.9
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 5.4e-13 79.0 129 35.7
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 3.8e-11 72.8 233 29.6


User provided reference genes

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